Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 3.3e-49 198.0 93 100.0
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 2.6e-22 108.6 77 75.3
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 6.4e-21 104.0 68 80.9
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 1.1e-20 103.2 61 80.3
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 5.4e-20 100.9 65 75.4
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 9.2e-20 100.1 62 77.4
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.2e-19 99.8 64 75.0
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 2.1e-19 99.0 71 73.2
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 2.7e-19 98.6 64 73.4
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 2.7e-19 98.6 61 78.7
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 2.7e-19 98.6 61 80.3
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 2.7e-19 98.6 71 71.8
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 3.5e-19 98.2 60 78.3
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 3.5e-19 98.2 61 78.7
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 3.5e-19 98.2 61 78.7
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 4.6e-19 97.8 65 75.4
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 6.0e-19 97.4 60 78.3
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 7.8e-19 97.1 79 63.3
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 1.0e-18 96.7 64 73.4
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.0e-18 96.7 61 77.0
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.3e-18 96.3 66 69.7
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 1.3e-18 96.3 61 73.8
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 1.3e-18 96.3 51 88.2
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 1.7e-18 95.9 60 76.7
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 1.7e-18 95.9 61 75.4
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 1.7e-18 95.9 79 64.6
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 1.7e-18 95.9 61 75.4
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 2.3e-18 95.5 80 66.2
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 2.3e-18 95.5 58 79.3
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 2.3e-18 95.5 58 79.3
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 2.3e-18 95.5 60 76.7
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 2.3e-18 95.5 61 73.8
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 2.3e-18 95.5 61 73.8
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 3.0e-18 95.1 66 69.7
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 3.0e-18 95.1 61 77.0
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 3.9e-18 94.7 58 75.9
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 3.9e-18 94.7 67 65.7
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 3.9e-18 94.7 61 75.4
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 3.9e-18 94.7 61 75.4
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 3.9e-18 94.7 65 72.3
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 5.1e-18 94.4 61 72.1
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 5.1e-18 94.4 55 81.8
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 5.1e-18 94.4 61 72.1
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 5.1e-18 94.4 61 72.1
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 6.6e-18 94.0 60 73.3
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 6.6e-18 94.0 71 69.0
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 6.6e-18 94.0 64 68.8
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 6.6e-18 94.0 55 81.8
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 8.6e-18 93.6 60 75.0
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 8.6e-18 93.6 60 75.0
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 8.6e-18 93.6 54 83.3
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 8.6e-18 93.6 60 73.3
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 1.1e-17 93.2 71 66.2
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 1.1e-17 93.2 59 74.6
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 1.5e-17 92.8 60 71.7
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 1.5e-17 92.8 61 72.1
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 1.5e-17 92.8 60 71.7
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 1.5e-17 92.8 55 80.0
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 1.9e-17 92.4 70 68.6
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 1.9e-17 92.4 55 80.0
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.9e-17 92.4 55 78.2
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 2.5e-17 92.0 61 73.8
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 2.5e-17 92.0 74 63.5
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 3.3e-17 91.7 61 72.1
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 3.3e-17 91.7 61 70.5
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 3.3e-17 91.7 61 73.8
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 4.3e-17 91.3 54 81.5
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 4.3e-17 91.3 64 71.9
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 5.6e-17 90.9 55 78.2
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 5.6e-17 90.9 55 80.0
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 5.6e-17 90.9 58 72.4
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 5.6e-17 90.9 58 72.4
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 5.6e-17 90.9 66 68.2
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 9.6e-17 90.1 65 66.2
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 1.2e-16 89.7 60 71.7
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 1.2e-16 89.7 55 76.4
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 2.8e-16 88.6 54 77.8
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 4.7e-16 87.8 61 72.1
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 8.1e-16 87.0 49 83.7
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 1.1e-15 86.7 60 66.7
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.4e-15 85.5 49 81.6
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 3.1e-15 85.1 48 83.3
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 3.1e-15 85.1 49 83.7
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 4.0e-15 84.7 49 81.6
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 4.0e-15 84.7 55 78.2
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 5.2e-15 84.3 61 65.6
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 6.8e-15 84.0 52 76.9
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 6.8e-15 84.0 67 61.2
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 8.9e-15 83.6 52 76.9
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 2.6e-14 82.0 46 84.8
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 2.6e-14 82.0 46 84.8
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 2.6e-14 82.0 46 84.8
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 4.4e-14 81.3 53 71.7
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 4.4e-14 81.3 49 75.5
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 5.8e-14 80.9 53 73.6
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 5.8e-14 80.9 48 77.1
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 9.9e-14 80.1 46 80.4
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 9.9e-14 80.1 46 80.4
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 1.3e-13 79.7 61 65.6
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 2.2e-13 79.0 46 80.4
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 8.4e-13 77.0 42 88.1
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 8.4e-13 77.0 42 88.1
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-12 75.1 43 79.1
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-12 75.1 43 79.1
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-12 75.1 43 79.1
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-12 75.1 43 79.1
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.6e-11 72.8 43 76.7
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 1.7e-10 69.3 65 55.4
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 6.6e-10 67.4 45 68.9
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 5.6e-09 64.3 46 65.2
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 3.1e-07 58.5 69 44.9
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.5e-06 56.2 47 61.7
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 3.4e-06 55.1 73 42.5


User provided reference genes

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