Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 1.2e-198 696.4 379 100.0
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 5.8e-161 571.2 334 93.4
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 1.0e-157 560.5 381 81.6
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 2.0e-153 546.2 347 85.6
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 5.4e-151 538.1 365 81.4
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.7e-144 516.5 340 82.9
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 1.4e-143 513.5 372 76.9
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 1.9e-143 513.1 384 75.0
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 3.5e-142 508.8 367 78.2
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 7.8e-142 507.7 367 76.6
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 7.8e-142 507.7 367 77.9
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 7.8e-142 507.7 367 77.9
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 1.3e-141 506.9 386 73.8
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 3.9e-141 505.4 361 78.4
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 3.9e-141 505.4 380 69.7
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 1.9e-140 503.1 361 76.7
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 5.6e-140 501.5 386 74.4
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 1.2e-139 500.4 328 81.7
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 2.1e-139 499.6 362 75.7
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 2.8e-139 499.2 342 78.1
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 4.7e-139 498.4 348 77.6
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 8.1e-139 497.7 334 79.0
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 1.1e-138 497.3 379 74.9
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 2.4e-138 496.1 331 80.1
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 3.1e-138 495.7 364 74.5
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 1.5e-137 493.4 341 77.4
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 2.6e-137 492.7 360 75.6
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 5.8e-137 491.5 361 75.6
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 7.6e-137 491.1 381 72.7
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 9.9e-137 490.7 352 76.4
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.7e-136 490.0 366 75.7
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.7e-136 490.0 365 75.9
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 4.9e-136 488.4 371 73.6
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 4.9e-136 488.4 371 73.6
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 8.4e-136 487.6 368 74.7
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 8.4e-136 487.6 342 78.9
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.1e-135 487.3 361 76.7
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 3.2e-135 485.7 342 76.6
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 3.2e-135 485.7 379 74.9
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 4.2e-135 485.3 362 76.0
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 5.4e-135 485.0 342 77.5
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 7.1e-135 484.6 357 73.4
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.2e-134 483.8 342 77.5
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 2.7e-134 482.6 374 75.4
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 6.0e-134 481.5 349 75.9
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 7.8e-134 481.1 342 76.9
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 2.3e-133 479.6 329 77.8
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 3.9e-133 478.8 333 78.1
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 8.7e-133 477.6 380 71.3
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 1.1e-132 477.2 381 71.4
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 1.5e-132 476.9 333 78.1
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 1.9e-132 476.5 365 74.2
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 7.3e-132 474.6 363 72.5
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 7.3e-132 474.6 344 75.3
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 9.6e-132 474.2 363 74.1
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 1.6e-131 473.4 329 77.5
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 2.1e-131 473.0 365 71.8
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 4.8e-131 471.9 342 74.9
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.4e-130 469.5 342 74.6
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 2.4e-130 469.5 361 74.5
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 2.4e-130 469.5 349 75.1
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 3.1e-130 469.2 377 69.5
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 5.3e-130 468.4 340 74.7
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 6.9e-130 468.0 344 75.0
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 9.0e-130 467.6 370 71.1
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 9.0e-130 467.6 332 74.1
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 1.2e-129 467.2 329 77.2
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 1.5e-129 466.8 345 75.9
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.5e-129 466.8 325 75.7
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 2.0e-129 466.5 377 70.0
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 2.6e-129 466.1 327 77.7
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 3.4e-129 465.7 327 77.4
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 5.8e-129 464.9 327 77.7
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 9.9e-129 464.2 342 75.1
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 9.9e-129 464.2 342 75.1
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 9.9e-129 464.2 325 75.7
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 1.3e-128 463.8 327 77.4
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.3e-128 463.8 380 69.2
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 1.7e-128 463.4 369 71.3
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 2.2e-128 463.0 369 71.0
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 2.2e-128 463.0 368 71.2
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 2.9e-128 462.6 327 76.8
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 3.8e-128 462.2 369 71.0
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 4.9e-128 461.8 369 70.7
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 4.9e-128 461.8 327 76.8
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 1.4e-127 460.3 327 76.5
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 1.4e-127 460.3 368 71.7
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.4e-127 460.3 338 72.8
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 1.9e-127 459.9 327 76.5
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 1.9e-127 459.9 336 74.7
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 2.4e-127 459.5 369 70.7
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 2.4e-127 459.5 369 70.7
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 3.2e-127 459.1 369 71.0
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 3.2e-127 459.1 354 72.6
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 7.1e-127 458.0 338 72.2
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 7.1e-127 458.0 378 69.6
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 9.3e-127 457.6 375 70.7
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.2e-126 457.2 354 72.3
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.2e-126 457.2 354 72.3
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 1.6e-126 456.8 327 75.8
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 2.7e-126 456.1 368 70.7
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 3.5e-126 455.7 367 71.4
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 3.0e-125 452.6 359 70.8
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 6.7e-125 451.4 367 69.8
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 1.3e-123 447.2 360 71.1
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 3.7e-123 445.7 375 69.3
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 8.1e-123 444.5 368 68.2
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 1.1e-122 444.1 364 69.0
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 2.1e-118 429.9 378 65.6
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 6.0e-118 428.3 356 67.4
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 7.4e-116 421.4 304 73.7
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 2.1e-115 419.9 304 73.4
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 2.8e-115 419.5 351 66.7
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 2.8e-115 419.5 304 73.4
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 4.5e-113 412.1 379 64.1
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 1.4e-111 407.1 367 62.1
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 7.1e-111 404.8 360 66.7
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 5.0e-104 382.1 318 69.8
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 8.8e-101 371.3 367 62.7
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 4.3e-100 369.0 325 64.0
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 4.8e-99 365.5 360 59.2
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 9.1e-98 361.3 328 61.6
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 2.9e-96 356.3 243 80.7
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 1.6e-94 350.5 281 70.5
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 8.8e-93 344.7 326 61.7
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 1.7e-91 340.5 339 58.1
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 6.3e-91 338.6 243 77.0
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 5.0e-88 328.9 245 73.9
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 1.2e-86 324.3 203 79.3
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 2.3e-85 320.1 297 58.6
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 9.7e-84 314.7 366 55.5
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 2.2e-83 313.5 318 56.0
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.9e-80 303.1 337 53.4
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 1.4e-77 294.3 351 54.4
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 4.7e-70 269.2 243 60.1
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 1.6e-65 254.2 209 66.0
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.3e-53 213.8 208 55.8
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 2.0e-49 200.7 128 80.5
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 5.2e-45 186.0 165 60.0
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 4.7e-38 162.9 140 65.7
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 5.8e-36 156.0 164 56.7
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 7.1e-34 149.1 90 80.0
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 4.6e-33 146.4 102 68.6
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 2.8e-30 137.1 97 69.1
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 8.9e-29 132.1 128 55.5
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 7.6e-28 129.0 90 67.8
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 6.0e-25 119.4 78 76.9
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-23 114.8 287 33.1
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 9.0e-21 105.5 104 53.8
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 2.6e-20 104.0 95 57.9
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 2.9e-19 100.5 66 77.3
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 6.4e-19 99.4 88 56.8
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.9e-18 97.8 105 49.5
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 7.8e-17 92.4 59 71.2
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 3.3e-15 87.0 183 34.4
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 5.6e-15 86.3 273 32.6
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 6.2e-14 82.8 140 40.7
Lsat_1_v5_gn_2_1161 Lactuca sativa HOM05D004231 ORTHO05D004814 1.2e-12 78.6 59 67.8
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 1.9e-10 71.2 63 61.9
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.4e-10 70.9 50 64.0
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 7.1e-10 69.3 50 62.0
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 7.1e-10 69.3 45 68.9
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.2e-09 68.6 45 68.9
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.3e-08 65.1 45 66.7
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 2.3e-08 64.3 62 53.2
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.0e-08 63.9 78 47.4
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.0e-08 63.9 78 47.4
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.9e-08 63.5 50 58.0
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 5.1e-08 63.2 66 54.5
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 1.5e-07 61.6 66 53.0
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 4.3e-07 60.1 47 61.7
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 5.6e-07 59.7 45 60.0
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 1.3e-06 58.5 67 73.1


User provided reference genes

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