Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 0.0e+00 1411.0 707 100.0
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.6e-151 540.8 314 83.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 3.3e-141 506.5 315 81.3
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 3.1e-131 473.4 324 74.1
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.7e-129 466.5 313 72.8
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.9e-128 464.2 327 68.8
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.4e-128 463.8 315 72.1
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 4.1e-128 463.0 314 71.7
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.6e-127 461.1 314 71.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.0e-127 460.7 326 70.6
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.5e-127 459.9 327 70.6
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.0e-126 458.4 314 70.4
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 5.0e-126 456.1 314 71.7
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 5.0e-126 456.1 326 69.6
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.1e-125 454.9 320 69.4
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 9.5e-125 451.8 314 70.7
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.6e-124 451.1 315 69.8
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 8.0e-124 448.7 313 69.6
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.4e-123 448.0 323 70.0
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.8e-123 447.6 315 68.9
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.0e-123 446.4 315 68.6
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.9e-123 445.3 315 68.6
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.2e-122 444.9 323 68.1
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 9.8e-122 441.8 315 67.3
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.9e-121 440.3 315 68.6
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 8.3e-121 438.7 326 68.1
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 8.3e-121 438.7 315 68.3
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 7.0e-120 435.6 314 68.2
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.2e-119 434.9 317 68.5
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.1e-119 434.1 314 68.2
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 7.8e-119 432.2 316 66.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.0e-118 431.8 325 67.4
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.3e-118 431.4 331 67.4
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.7e-118 431.0 318 67.0
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.1e-118 429.5 325 66.8
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 5.1e-118 429.5 391 58.6
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 8.6e-118 428.7 318 66.7
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.1e-117 428.3 313 67.1
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.5e-117 427.2 317 67.2
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.5e-117 425.2 313 66.5
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 9.5e-117 425.2 323 66.3
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.2e-116 424.9 318 66.4
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.6e-116 424.5 327 64.5
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.1e-116 424.1 316 64.2
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.8e-116 423.7 290 70.0
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 2.8e-116 423.7 257 77.0
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.8e-116 423.7 326 65.3
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.6e-116 423.3 317 66.2
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 6.2e-116 422.5 316 66.5
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.8e-115 421.0 315 66.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.0e-115 419.9 317 67.2
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.0e-115 419.9 317 67.2
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 5.2e-115 419.5 315 65.1
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.8e-115 419.1 327 64.2
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.9e-115 418.7 329 63.8
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 8.9e-115 418.7 275 73.5
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-114 418.3 322 65.5
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.2e-114 418.3 332 63.9
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 1.5e-114 417.9 291 67.0
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.6e-114 417.2 331 62.8
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 4.4e-114 416.4 324 64.5
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.4e-114 416.4 320 66.6
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 5.8e-114 416.0 314 64.6
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 5.8e-114 416.0 316 63.9
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.2e-113 414.1 308 66.2
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 2.9e-113 413.7 332 63.3
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 3.7e-113 413.3 315 65.7
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.7e-113 413.3 316 64.2
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.3e-113 412.1 320 65.0
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.1e-112 411.8 269 72.5
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 3.2e-112 410.2 315 63.5
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-111 408.3 329 63.2
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-111 407.1 315 64.1
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 6.0e-111 406.0 316 63.0
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.3e-110 404.8 287 70.4
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-110 403.7 283 70.3
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.9e-110 403.3 330 63.3
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.6e-109 399.4 306 63.4
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-108 396.7 259 73.4
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.2e-106 391.7 322 62.1
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.2e-106 391.7 314 64.3
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.6e-106 390.6 290 66.9
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 4.4e-106 389.8 257 73.2
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.3e-105 388.3 256 71.9
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 3.8e-105 386.7 330 61.2
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.2e-103 381.7 320 60.6
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 5.6e-101 372.9 287 65.2
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 6.2e-100 369.4 320 58.4
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.4e-99 368.2 337 57.0
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.8e-99 367.9 269 67.7
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.1e-95 354.4 270 64.8
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.4e-91 341.7 348 53.2
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-91 340.9 327 55.7
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 4.9e-89 333.2 223 71.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.0e-87 326.2 223 70.9
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.1e-83 315.5 223 68.2
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 9.9e-82 308.9 238 65.1
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.9e-72 278.1 276 53.6
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 3.5e-71 273.9 327 51.1
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 3.5e-71 273.9 210 62.4
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 3.7e-68 263.8 287 55.1
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.1e-67 262.3 269 46.5
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.4e-67 261.2 178 70.8
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 2.2e-65 254.6 232 56.5
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.8e-60 237.7 255 51.8
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.4e-56 222.6 203 57.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 3.9e-54 217.2 190 57.9
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 3.8e-49 200.7 188 51.1
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.4e-46 192.2 275 42.5
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 8.8e-46 189.5 136 68.4
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-45 189.1 126 72.2
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 3.3e-45 187.6 190 53.2
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 5.3e-43 180.3 113 72.6
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.5e-42 177.2 222 44.1
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 5.0e-41 173.7 195 49.7
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.7e-39 167.9 186 48.9
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 6.5e-33 146.7 146 49.3
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.6e-29 134.8 233 39.1
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 4.8e-28 130.6 98 68.4
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.9e-26 123.6 81 66.7
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.5e-24 119.0 108 57.4
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 2.5e-24 118.2 78 74.4
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 7.2e-24 116.7 197 39.6
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 2.8e-23 114.8 105 56.2
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 4.7e-23 114.0 191 39.8
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 6.1e-23 113.6 66 80.3
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 8.0e-23 113.2 71 73.2
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.2e-21 109.4 107 57.9
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 9.8e-21 106.3 147 43.5
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 6.3e-20 103.6 212 36.8
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.8e-19 102.1 268 29.1
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 9.2e-19 99.8 194 32.5
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.2e-18 99.4 300 28.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.1e-16 92.8 81 58.0
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 3.6e-15 87.8 295 28.5
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.0e-14 86.3 59 69.5
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 9.8e-13 79.7 54 68.5
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 9.8e-13 79.7 244 25.0
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.9e-12 77.4 246 24.8
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 4.9e-12 77.4 243 24.3
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 8.3e-12 76.6 65 60.0
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.1e-11 76.3 58 62.1
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 3.2e-11 74.7 282 22.7
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 7.0e-11 73.6 252 26.2
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 2.0e-10 72.0 62 51.6
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 3.9e-09 67.8 263 23.6
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.5e-08 65.9 195 25.6
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 3.1e-06 58.2 311 25.4
BcaC08g46535 Brassica carinata HOM05D005158 ORTHO05D005510 8.9e-06 56.6 88 44.3


User provided reference genes

Program Settings