Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 1.5e-68 262.7 134 100.0
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 1.8e-32 142.9 105 74.3
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 8.9e-32 140.6 105 73.3
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 3.7e-30 135.2 108 67.6
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.6e-28 129.8 92 71.7
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 3.5e-28 128.6 93 68.8
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 6.0e-28 127.9 137 52.6
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 1.0e-27 127.1 93 68.8
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 1.3e-27 126.7 93 68.8
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 1.3e-27 126.7 96 69.8
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 1.7e-27 126.3 96 67.7
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 3.0e-27 125.6 105 63.8
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 5.0e-27 124.8 92 67.4
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 5.0e-27 124.8 102 65.7
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 6.6e-27 124.4 99 65.7
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 1.9e-26 122.9 92 66.3
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 4.3e-26 121.7 96 66.7
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 4.3e-26 121.7 99 65.7
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 5.6e-26 121.3 96 66.7
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 5.6e-26 121.3 95 65.3
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 7.3e-26 120.9 96 66.7
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 7.3e-26 120.9 90 67.8
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 7.3e-26 120.9 96 65.6
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 1.2e-25 120.2 91 64.8
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 2.1e-25 119.4 90 66.7
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 2.8e-25 119.0 99 64.6
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 3.6e-25 118.6 96 64.6
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 3.6e-25 118.6 92 65.2
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 4.7e-25 118.2 92 66.3
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 4.7e-25 118.2 97 64.9
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 4.7e-25 118.2 104 62.5
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 6.2e-25 117.9 98 62.2
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 6.2e-25 117.9 96 62.5
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 6.2e-25 117.9 102 63.7
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 6.2e-25 117.9 96 63.5
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 6.2e-25 117.9 92 65.2
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 8.1e-25 117.5 99 63.6
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 1.1e-24 117.1 105 61.9
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 1.1e-24 117.1 97 62.9
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 1.4e-24 116.7 92 62.0
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 1.8e-24 116.3 92 65.2
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 2.3e-24 115.9 96 62.5
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 2.3e-24 115.9 94 64.9
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 2.3e-24 115.9 88 68.2
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 4.0e-24 115.2 96 64.6
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 4.0e-24 115.2 92 66.3
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 4.0e-24 115.2 100 60.0
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 5.2e-24 114.8 84 70.2
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 5.2e-24 114.8 96 63.5
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 5.2e-24 114.8 89 65.2
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 5.2e-24 114.8 89 65.2
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 5.2e-24 114.8 92 63.0
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 5.2e-24 114.8 95 62.1
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 5.2e-24 114.8 98 60.2
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 6.8e-24 114.4 80 71.2
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 8.9e-24 114.0 96 62.5
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 8.9e-24 114.0 96 62.5
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 8.9e-24 114.0 96 62.5
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 8.9e-24 114.0 98 62.2
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 8.9e-24 114.0 100 62.0
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 8.9e-24 114.0 101 62.4
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 8.9e-24 114.0 92 63.0
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 8.9e-24 114.0 94 66.0
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.2e-23 113.6 96 62.5
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.2e-23 113.6 96 62.5
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.2e-23 113.6 96 62.5
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 1.5e-23 113.2 98 56.1
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 2.0e-23 112.8 89 66.3
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 2.0e-23 112.8 89 66.3
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 2.6e-23 112.5 102 60.8
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 3.4e-23 112.1 96 63.5
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 3.4e-23 112.1 82 69.5
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 3.4e-23 112.1 82 69.5
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 4.4e-23 111.7 92 63.0
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 4.4e-23 111.7 91 62.6
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 4.4e-23 111.7 89 65.2
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 5.8e-23 111.3 99 60.6
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 9.8e-23 110.5 93 63.4
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 1.7e-22 109.8 97 58.8
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 2.2e-22 109.4 98 57.1
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 2.2e-22 109.4 98 59.2
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 3.7e-22 108.6 98 57.1
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 3.7e-22 108.6 91 59.3
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 4.9e-22 108.2 97 56.7
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 8.3e-22 107.5 103 56.3
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 8.3e-22 107.5 100 60.0
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 8.3e-22 107.5 97 61.9
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 1.4e-21 106.7 100 60.0
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 1.9e-21 106.3 88 63.6
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 4.1e-21 105.1 93 61.3
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 7.1e-21 104.4 95 56.8
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 9.2e-21 104.0 90 60.0
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.2e-20 103.6 92 56.5
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 1.6e-20 103.2 90 58.9
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 2.1e-20 102.8 92 59.8
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 6.0e-20 101.3 93 55.9
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 2.3e-19 99.4 89 53.9
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 2.3e-19 99.4 93 58.1
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 1.9e-18 96.3 88 54.5
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 5.8e-15 84.7 88 44.3
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 2.2e-14 82.8 88 48.9
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 5.1e-11 71.6 97 41.2
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 6.6e-11 71.2 91 39.6
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 2.1e-09 66.2 72 51.4
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 2.1e-09 66.2 72 51.4
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 4.0e-08 62.0 53 56.6


User provided reference genes

Program Settings