Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0974 Erigeron canadensis HOM05D021928 ORTHO05D015640 7.9e-120 433.7 209 100.0
ECA233G1512 Erigeron canadensis HOM05D021928 ORTHO05D015640 3.5e-83 312.0 212 75.0
ECA233G2435 Erigeron canadensis HOM05D021928 ORTHO05D015640 2.9e-69 265.8 214 65.4
ECA233G2609 Erigeron canadensis HOM05D021928 ORTHO05D015640 3.0e-58 229.2 216 57.4
ECA233G1519 Erigeron canadensis HOM05D021928 ORTHO05D015640 2.3e-26 123.2 109 59.6
Lsat_1_v5_gn_8_18560 Lactuca sativa HOM05D000535 ORTHO05D015640 3.8e-21 105.9 194 32.5
ECA233G0242 Erigeron canadensis HOM05D000535 ORTHO05D015640 4.3e-17 92.4 174 35.6
HanXRQChr05g0158941 Helianthus annuus HOM05D000535 ORTHO05D015640 2.1e-16 90.1 197 31.0
HanXRQChr17g0538161 Helianthus annuus HOM05D000535 ORTHO05D015640 4.8e-16 89.0 218 28.9
Lsat_1_v5_gn_8_18580 Lactuca sativa HOM05D002256 ORTHO05D015640 8.2e-16 88.2 214 27.6
ECA233G4337 Erigeron canadensis HOM05D000535 ORTHO05D015640 6.9e-15 85.1 215 27.4
ECA238G3099 Erigeron canadensis HOM05D000535 ORTHO05D000427 6.9e-15 85.1 183 29.5
ECA238G2553 Erigeron canadensis HOM05D018717 ORTHO05D025304 6.5e-13 78.6 205 26.8
GSVIVG01012920001 Vitis vinifera HOM05D000535 ORTHO05D000427 2.5e-12 76.6 162 33.3
CSS0030185 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 3.2e-12 76.3 209 29.2
CSS0021540 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 7.1e-12 75.1 209 29.7
Duzib205G1520 Durio zibethinus HOM05D000535 ORTHO05D000427 1.6e-11 73.9 183 30.6
Gohir.A05G392000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 7.9e-11 71.6 190 32.1
Gohir.D04G025100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.0e-10 71.2 190 31.6
Gorai.012G027700 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.0e-10 71.2 190 31.6
arahy.Tifrunner.gnm1.ann1.K2SWWG Arachis hypogaea HOM05D000535 ORTHO05D000427 2.5e-09 66.6 156 32.1
Sc14g0008220 Simmondsia chinensis HOM05D000535 ORTHO05D000427 4.3e-09 65.9 194 25.8
Lj2g0010766 Lotus japonicus HOM05D000535 ORTHO05D000427 7.4e-09 65.1 159 28.9
Dinv10703 Davidia involucrata HOM05D000535 ORTHO05D000427 8.2e-08 61.6 136 33.8
Dinv10707 Davidia involucrata HOM05D000535 ORTHO05D000427 1.1e-07 61.2 170 29.4
Eucgr.L03158 Eucalyptus grandis HOM05D000535 ORTHO05D000427 1.1e-07 61.2 190 28.4
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-07 60.8 159 31.4
Cc00_g31050 Coffea canephora HOM05D000535 ORTHO05D000427 1.4e-07 60.8 209 26.8
Eucgr.K02326 Eucalyptus grandis HOM05D000535 ORTHO05D000427 1.4e-07 60.8 190 27.9
CSS0038674 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 1.8e-07 60.5 180 28.9
Dinv10704 Davidia involucrata HOM05D000535 ORTHO05D000427 2.4e-07 60.1 147 32.0
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 5.3e-07 58.9 159 30.8
Cc10_g11700 Coffea canephora HOM05D000535 ORTHO05D000427 5.3e-07 58.9 192 28.1
Lj2P607T10 Lonicera japonica HOM05D000535 ORTHO05D000427 5.3e-07 58.9 210 26.7
Medtr3g106585 Medicago truncatula HOM05D000535 ORTHO05D013302 9.0e-07 58.2 185 24.9
Cc00_g30520 Coffea canephora HOM05D000535 ORTHO05D000427 2.0e-06 57.0 218 27.5
Cc10_g11720 Coffea canephora HOM05D000535 ORTHO05D000427 2.0e-06 57.0 215 27.4
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 2.0e-06 57.0 157 31.2
Cc00_g04330 Coffea canephora HOM05D000535 ORTHO05D000427 3.4e-06 56.2 218 28.0
Medtr6g059680 Medicago truncatula HOM05D000535 ORTHO05D000427 5.9e-06 55.5 212 26.9
Aqoxy3G04312 Aquilegia oxysepala HOM05D000535 ORTHO05D000427 1.0e-05 54.7 181 25.4


User provided reference genes

Program Settings