Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.1e-121 439.1 234 100.0
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 3.3e-50 202.6 277 54.9
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 2.7e-28 129.8 210 46.7
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 4.0e-27 125.9 243 41.6
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 5.2e-27 125.6 238 41.6
HanXRQChr13g0387161 Helianthus annuus HOM05D007731 ORTHO05D008483 2.0e-26 123.6 179 48.0
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 5.7e-26 122.1 257 39.3
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.8e-25 119.0 260 37.3
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.1e-24 117.9 262 39.7
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 3.1e-24 116.3 244 41.0
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 5.3e-24 115.5 267 38.6
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.2e-23 114.4 182 47.3
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 2.7e-23 113.2 211 42.2
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.3e-22 110.9 176 48.9
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.9e-22 109.8 269 37.2
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.5e-22 108.6 203 42.4
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 6.5e-22 108.6 203 42.4
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 3.2e-21 106.3 133 51.9
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 9.4e-21 104.8 201 41.8
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 9.4e-21 104.8 244 41.0
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.7e-20 103.2 188 42.6
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 2.7e-20 103.2 209 39.2
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 6.1e-20 102.1 220 37.3
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 1.8e-19 100.5 216 37.0
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.8e-19 100.5 310 34.2
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 2.3e-19 100.1 247 39.3
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 4.0e-19 99.4 268 34.7
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 6.8e-19 98.6 202 40.6
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.0e-18 97.1 241 34.9
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 2.6e-18 96.7 134 47.0
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 7.5e-18 95.1 188 39.4
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 7.5e-18 95.1 189 41.8
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 7.5e-18 95.1 196 40.8
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.2e-17 93.6 246 35.8
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 2.8e-17 93.2 134 46.3
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 3.7e-17 92.8 186 39.2
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.7e-17 92.8 126 46.8
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 4.8e-17 92.4 203 39.4
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 8.3e-17 91.7 235 36.2
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 2.4e-16 90.1 234 36.3
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.1e-16 89.7 233 36.9
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 3.1e-16 89.7 242 34.3
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 5.4e-16 89.0 222 38.7
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 7.0e-16 88.6 242 37.6
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 7.0e-16 88.6 178 40.4
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 9.1e-16 88.2 200 38.5
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 1.2e-15 87.8 177 38.4
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.0e-15 87.0 177 40.7
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.5e-15 85.9 218 37.6
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 7.7e-15 85.1 120 45.8
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.7e-14 84.0 112 52.7
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 2.3e-14 83.6 167 39.5
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.8e-14 82.8 194 38.1
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 5.0e-14 82.4 205 37.1
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 8.6e-14 81.6 212 35.4
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.6e-14 81.6 226 32.7
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 8.6e-14 81.6 226 32.7
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 8.6e-14 81.6 174 39.7
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.5e-13 80.9 141 46.1
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.9e-13 80.5 195 36.9
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 5.5e-13 79.0 167 40.1
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.6e-12 77.4 274 34.3
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.1e-12 77.0 194 37.6
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.1e-12 77.0 137 43.1
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.8e-12 76.6 197 37.6
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 2.8e-12 76.6 245 33.5
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 2.8e-12 76.6 246 35.4
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 6.1e-12 75.5 189 36.5
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 8.0e-12 75.1 113 49.6
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.0e-11 74.7 86 47.7
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.8e-11 73.9 120 45.8
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 2.3e-11 73.6 108 47.2
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 8.8e-11 71.6 186 36.6
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.2e-10 71.2 248 32.7
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 4.4e-10 69.3 216 35.2
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 5.7e-10 68.9 202 34.7
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 7.5e-10 68.6 203 33.0
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 9.8e-10 68.2 120 44.2
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 1.7e-09 67.4 69 55.1
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.2e-09 67.0 122 43.4
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 3.1e-08 63.2 184 31.5
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 3.1e-08 63.2 161 37.3
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 5.4e-08 62.4 189 30.7
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 9.2e-08 61.6 179 35.2
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 9.2e-08 61.6 179 35.2
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 9.2e-08 61.6 179 35.2
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 9.2e-08 61.6 184 31.0
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 1.2e-07 61.2 52 51.9
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.2e-07 61.2 181 32.6
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.6e-07 60.8 187 31.6
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 2.0e-07 60.5 178 33.7
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 3.5e-07 59.7 180 30.0
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 1.7e-06 57.4 181 32.6
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 2.3e-06 57.0 102 38.2
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 2.9e-06 56.6 189 27.5
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.9e-06 56.6 167 28.1
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.9e-06 56.6 182 31.9


User provided reference genes

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