Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.2e-55 219.9 136 100.0
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 6.9e-16 87.8 117 48.7
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 3.8e-14 82.0 125 47.2
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 3.2e-13 79.0 125 45.6
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 2.7e-12 75.9 123 44.7
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 2.7e-12 75.9 125 44.0
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 3.6e-12 75.5 124 44.4
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 3.6e-12 75.5 119 42.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 3.6e-12 75.5 119 42.0
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 3.6e-12 75.5 122 42.6
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 4.7e-12 75.1 121 43.8
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.7e-12 75.1 121 42.1
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 6.1e-12 74.7 125 44.0
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 6.1e-12 74.7 122 44.3
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 6.1e-12 74.7 122 42.6
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 6.1e-12 74.7 122 43.4
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 7.9e-12 74.3 122 42.6
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 7.9e-12 74.3 122 42.6
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.0e-11 73.9 125 43.2
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.0e-11 73.9 121 43.8
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 1.0e-11 73.9 122 42.6
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.0e-11 73.9 125 44.0
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.4e-11 73.6 122 42.6
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.4e-11 73.6 122 42.6
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.4e-11 73.6 122 42.6
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.4e-11 73.6 122 42.6
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.8e-11 73.2 124 42.7
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.8e-11 73.2 123 43.1
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.8e-11 73.2 125 42.4
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 3.0e-11 72.4 122 42.6
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 3.0e-11 72.4 122 41.8
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.0e-11 72.4 125 43.2
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.0e-11 72.4 125 43.2
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.1e-11 71.6 124 42.7
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.1e-11 71.6 124 42.7
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.1e-11 71.6 124 42.7
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 5.1e-11 71.6 120 40.8
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.7e-11 71.2 124 42.7
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 6.7e-11 71.2 125 42.4
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 6.7e-11 71.2 124 43.5
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 6.7e-11 71.2 125 42.4
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 6.7e-11 71.2 125 42.4
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 6.7e-11 71.2 119 42.0
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 8.8e-11 70.9 124 41.9
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 8.8e-11 70.9 125 41.6
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 8.8e-11 70.9 124 41.9
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 8.8e-11 70.9 125 41.6
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 8.8e-11 70.9 125 41.6
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 8.8e-11 70.9 121 41.3
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 8.8e-11 70.9 121 41.3
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 8.8e-11 70.9 124 42.7
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 1.1e-10 70.5 122 40.2
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 1.5e-10 70.1 125 41.6
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.5e-10 70.1 126 42.9
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.5e-10 70.1 126 42.9
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.5e-10 70.1 119 43.7
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.5e-10 70.1 125 41.6
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.0e-10 69.7 124 41.9
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.0e-10 69.7 124 41.9
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.0e-10 69.7 124 41.9
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 2.0e-10 69.7 124 42.7
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 2.0e-10 69.7 122 41.0
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 2.0e-10 69.7 122 40.2
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.6e-10 69.3 126 41.3
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 2.6e-10 69.3 121 41.3
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 3.3e-10 68.9 123 39.8
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 3.3e-10 68.9 125 41.6
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 4.4e-10 68.6 124 41.1
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 5.7e-10 68.2 125 40.8
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 5.7e-10 68.2 124 41.9
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 5.7e-10 68.2 122 41.0
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 7.4e-10 67.8 125 40.8
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 7.4e-10 67.8 125 41.6
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 7.4e-10 67.8 122 41.0
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 7.4e-10 67.8 122 41.0
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 9.7e-10 67.4 128 38.3
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 9.7e-10 67.4 122 40.2
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 9.7e-10 67.4 120 38.3
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 9.7e-10 67.4 125 40.0
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 9.7e-10 67.4 125 40.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 1.3e-09 67.0 122 40.2
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.3e-09 67.0 125 41.6
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 1.3e-09 67.0 125 41.6
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.3e-09 67.0 126 40.5
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 1.3e-09 67.0 125 40.8
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 2.8e-09 65.9 125 40.8
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.8e-09 65.9 125 39.2
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 2.8e-09 65.9 121 37.2
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 3.7e-09 65.5 124 38.7
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 3.7e-09 65.5 128 37.5
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 3.7e-09 65.5 125 40.8
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 3.7e-09 65.5 127 40.9
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 4.8e-09 65.1 118 43.2
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 4.8e-09 65.1 117 40.2
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 4.8e-09 65.1 122 40.2
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 6.3e-09 64.7 127 40.2
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 6.3e-09 64.7 122 38.5
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 6.3e-09 64.7 120 40.0
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 1.1e-08 63.9 122 39.3
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.1e-08 63.9 125 39.2
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.1e-08 63.9 118 42.4
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.1e-08 63.9 122 39.3
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.4e-08 63.5 118 43.2
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.8e-08 63.2 131 38.9
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.8e-08 63.2 122 37.7
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 4.1e-08 62.0 129 39.5
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 4.1e-08 62.0 129 39.5
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 4.1e-08 62.0 127 38.6
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 5.3e-08 61.6 120 38.3
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 9.1e-08 60.8 124 37.9
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 1.2e-07 60.5 122 36.1
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 1.0e-06 57.4 125 37.6
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.9e-06 55.8 119 37.8
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 3.8e-06 55.5 106 39.6
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.8e-06 55.5 80 40.0
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.8e-06 55.5 80 40.0
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 5.0e-06 55.1 118 34.7
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 6.5e-06 54.7 102 36.3


User provided reference genes

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