Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 3.8e-135 485.0 264 100.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 2.0e-96 356.3 265 74.3
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 5.2e-84 315.1 259 70.3
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.3e-63 247.3 262 54.6
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.3e-63 247.3 259 52.5
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.3e-63 247.3 259 55.6
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 1.1e-62 244.2 259 52.1
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.5e-62 243.8 259 52.1
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.5e-62 243.0 256 54.3
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 6.8e-60 235.0 259 53.7
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.2e-59 234.2 248 54.4
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 1.5e-59 233.8 259 52.5
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 2.6e-59 233.0 257 54.1
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 5.8e-59 231.9 258 54.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.3e-58 230.7 218 58.3
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.3e-58 230.7 257 54.1
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 8.3e-58 228.0 253 50.6
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 3.2e-57 226.1 256 51.2
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 1.6e-56 223.8 249 54.2
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 3.0e-55 219.5 258 50.8
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.9e-54 216.9 258 53.5
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.9e-54 216.9 258 53.5
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 5.6e-54 215.3 259 51.0
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 5.6e-54 215.3 254 52.4
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 7.3e-54 214.9 258 51.6
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.6e-53 213.8 258 50.0
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 2.1e-53 213.4 257 49.8
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 2.8e-53 213.0 258 52.3
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 8.1e-53 211.5 255 51.8
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 8.1e-53 211.5 258 50.0
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.1e-52 211.1 259 49.4
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 1.4e-52 210.7 258 51.2
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.8e-52 210.3 250 51.2
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.3e-52 209.9 260 51.5
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 3.1e-52 209.5 258 51.9
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 3.1e-52 209.5 244 52.5
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 4.0e-52 209.1 260 47.3
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 6.8e-52 208.4 259 47.1
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 6.8e-52 208.4 260 46.5
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 8.9e-52 208.0 256 51.2
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 8.9e-52 208.0 259 47.5
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.6e-51 206.5 256 47.3
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 2.2e-50 203.4 274 48.5
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 2.2e-50 203.4 227 52.4
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 8.4e-50 201.4 259 46.3
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 8.4e-50 201.4 232 50.9
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.4e-49 199.9 247 46.6
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 9.2e-49 198.0 252 47.6
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.2e-48 197.6 243 50.6
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.1e-48 196.8 257 46.7
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.6e-48 195.7 246 46.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 6.0e-48 195.3 245 48.6
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 6.0e-48 195.3 245 49.0
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.0e-47 194.5 255 46.3
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 3.9e-47 192.6 297 43.8
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 8.6e-47 191.4 249 47.0
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.1e-46 191.0 259 46.7
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.5e-46 189.9 261 46.4
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 4.3e-46 189.1 222 50.0
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 2.8e-45 186.4 254 45.3
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 2.8e-45 186.4 222 52.7
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.0e-43 180.3 205 53.2
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 9.9e-43 177.9 253 42.3
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.3e-42 177.6 244 46.3
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 2.2e-42 176.8 188 53.2
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.9e-42 176.4 251 45.4
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 8.4e-42 174.9 236 47.5
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 8.4e-42 174.9 247 44.5
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 2.4e-41 173.3 259 42.5
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 2.1e-40 170.2 202 51.0
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.1e-40 170.2 257 40.9
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.9e-39 166.0 194 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.9e-38 163.7 253 41.1
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.9e-38 163.7 179 52.0
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 4.3e-38 162.5 294 40.5
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.3e-37 161.0 201 51.2
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.3e-37 161.0 219 44.7
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 8.1e-37 158.3 256 40.2
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.1e-36 157.9 203 45.8
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.9e-35 151.4 203 44.8
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 1.6e-32 144.1 219 41.1
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 1.0e-31 141.4 259 37.5
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 7.4e-30 135.2 145 55.2
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 6.2e-29 132.1 224 41.5
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 4.5e-27 125.9 106 66.0
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 6.4e-26 122.1 144 52.1
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 6.4e-26 122.1 233 37.8
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 6.2e-21 105.5 95 63.2
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.9e-20 102.1 243 34.6
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 4.5e-19 99.4 141 44.7
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.4e-17 94.4 217 34.1
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 7.6e-11 72.0 132 34.1
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 1.7e-10 70.9 87 42.5
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 3.8e-10 69.7 116 36.2
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.1e-09 68.2 73 50.7


User provided reference genes

Program Settings