Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 3.0e-111 405.2 207 100.0
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 4.3e-86 321.6 209 80.9
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 5.5e-81 304.7 207 76.3
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 7.5e-62 241.1 212 59.0
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 9.7e-62 240.7 202 60.9
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 9.7e-62 240.7 204 61.8
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.7e-61 240.0 198 62.6
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 3.7e-61 238.8 205 59.0
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.7e-61 238.8 201 62.7
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.8e-61 238.4 201 62.2
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 5.3e-60 235.0 163 73.0
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 5.3e-60 235.0 176 65.3
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 7.0e-60 234.6 210 60.0
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 1.2e-59 233.8 182 66.5
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.2e-59 233.8 153 70.6
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 1.6e-59 233.4 168 68.5
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.6e-59 233.4 212 59.0
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 2.0e-59 233.0 164 68.3
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 3.5e-59 232.3 185 64.3
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 5.9e-59 231.5 188 63.3
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 5.9e-59 231.5 183 64.5
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 7.7e-59 231.1 168 67.3
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.2e-58 229.6 205 56.1
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 2.9e-58 229.2 205 55.6
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 2.9e-58 229.2 185 63.2
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 3.8e-58 228.8 185 62.7
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 1.1e-57 227.3 174 64.4
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.5e-57 226.9 165 67.3
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 3.2e-57 225.7 202 57.4
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 4.2e-57 225.3 164 67.7
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 5.5e-57 224.9 181 60.8
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 5.5e-57 224.9 214 57.0
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.2e-57 224.6 147 71.4
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 1.2e-56 223.8 177 62.1
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.2e-56 223.8 155 68.4
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 2.7e-56 222.6 212 57.5
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 2.7e-56 222.6 212 58.0
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 3.6e-56 222.2 177 61.6
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 3.6e-56 222.2 212 57.5
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.7e-56 221.9 193 61.1
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.1e-56 221.5 147 70.7
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 8.0e-56 221.1 155 69.0
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 8.0e-56 221.1 171 67.3
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 1.0e-55 220.7 208 55.8
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 1.0e-55 220.7 162 64.8
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.0e-55 220.7 180 62.8
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.4e-55 220.3 214 56.1
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 1.8e-55 219.9 210 54.8
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.8e-55 219.9 173 61.8
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 5.2e-55 218.4 210 54.8
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.2e-55 218.4 147 69.4
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 6.8e-55 218.0 185 58.4
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 1.2e-54 217.2 157 66.9
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.2e-54 217.2 157 66.9
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.2e-54 217.2 186 59.7
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 1.2e-54 217.2 173 61.3
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 1.5e-54 216.9 169 60.9
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 3.4e-54 215.7 202 55.4
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 5.7e-54 214.9 159 65.4
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 7.5e-54 214.5 210 53.8
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.3e-53 213.8 184 61.4
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.3e-53 213.8 182 58.2
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 3.7e-53 212.2 167 61.1
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 4.8e-53 211.8 161 64.0
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.8e-53 211.8 174 60.3
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 6.3e-53 211.5 191 56.5
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 8.3e-53 211.1 172 61.6
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 2.4e-52 209.5 144 68.8
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 3.1e-52 209.1 153 66.0
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 5.4e-52 208.4 201 54.7
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.4e-52 208.4 181 59.7
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 5.4e-52 208.4 156 67.3
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 7.0e-52 208.0 153 68.6
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.2e-51 207.2 205 56.6
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.2e-51 207.2 205 56.6
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.7e-51 206.1 205 56.1
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 3.5e-51 205.7 168 65.5
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 7.7e-51 204.5 213 52.6
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 2.3e-50 203.0 161 64.6
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 8.6e-50 201.1 132 70.5
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 9.5e-49 197.6 207 53.1
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 1.2e-48 197.2 183 56.8
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 2.6e-46 189.5 140 65.0
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.2e-45 186.4 182 53.3
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 7.0e-44 181.4 213 49.8
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 2.0e-43 179.9 136 65.4
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 3.5e-43 179.1 145 60.7
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 6.6e-42 174.9 181 50.8
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 6.6e-42 174.9 181 50.8
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.2e-40 170.6 149 54.4
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 2.8e-40 169.5 164 54.9
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 4.0e-39 165.6 140 60.0
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 6.8e-39 164.9 136 62.5
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.3e-37 160.6 164 53.0
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 4.3e-33 145.6 169 45.6
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 1.4e-31 140.6 90 74.4
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 5.4e-28 128.6 157 42.7
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 3.6e-24 115.9 113 54.9
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 5.2e-23 112.1 145 47.6
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.1e-20 104.4 178 36.5
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 5.4e-20 102.1 84 59.5
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 4.6e-19 99.0 146 34.2
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 5.2e-15 85.5 138 32.6
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.2e-12 75.9 186 34.4
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 2.7e-11 73.2 137 33.6
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.3e-10 70.9 186 32.3
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 3.0e-10 69.7 51 68.6
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.1e-09 67.8 113 43.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 4.7e-08 62.4 45 55.6
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.2e-08 62.0 44 70.5
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 5.3e-07 58.9 85 44.7


User provided reference genes

Program Settings