Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0666 Erigeron canadensis HOM05D007155 ORTHO05D003034 8.4e-120 435.3 643 100.0
Lsat_1_v5_gn_5_153261 Lactuca sativa HOM05D007155 ORTHO05D003034 1.8e-66 258.1 652 84.0
HanXRQChr01g0005921 Helianthus annuus HOM05D007155 ORTHO05D003034 1.2e-62 245.4 651 84.6
CSS0001449 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 1.8e-37 161.8 170 65.3
CSS0034942 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 1.8e-37 161.8 170 65.3
CiPaw.09G138700 Carya illinoinensis HOM05D007155 ORTHO05D003034 1.5e-36 158.7 605 78.8
Oeu046920.2 Olea europaea HOM05D007155 ORTHO05D003034 3.4e-36 157.5 608 78.1
GSVIVG01012156001 Vitis vinifera HOM05D007155 ORTHO05D003034 3.4e-36 157.5 595 81.5
Haze_05252 Corylus avellana HOM05D007155 ORTHO05D003034 9.8e-36 156.0 171 48.5
Rhsim10G0011200 Rhododendron simsii HOM05D007155 ORTHO05D003034 9.8e-36 156.0 162 48.8
vmacro11017 Vaccinium macrocarpon HOM05D007155 ORTHO05D003034 4.9e-35 153.7 163 61.3
Cfa001139 Carpinus fangiana HOM05D007155 ORTHO05D003034 1.1e-34 152.5 171 48.0
Dinv26303 Davidia involucrata HOM05D007155 ORTHO05D003034 3.2e-34 151.0 652 61.8
QL10p022098 Quercus lobata HOM05D007155 ORTHO05D003034 3.2e-34 151.0 651 73.6
Lj2P342T43 Lonicera japonica HOM05D007155 ORTHO05D003034 4.1e-34 150.6 600 78.3
CSS0017144 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 5.4e-34 150.2 159 50.3
VMungo1309G1642 Vigna mungo HOM05D007155 ORTHO05D003034 7.0e-34 149.8 162 50.6
Actinidia34693 Actinidia chinensis HOM05D007155 ORTHO05D003034 2.0e-33 148.3 129 59.7
Glyma.09G050500 Glycine max HOM05D007155 ORTHO05D003034 3.5e-33 147.5 138 54.3
CSS0035815 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 4.6e-33 147.1 159 49.1
Haze_05247 Corylus avellana HOM05D007155 ORTHO05D003034 1.0e-32 146.0 129 56.6
DCAR_001266 Daucus carota HOM05D007155 ORTHO05D003034 1.3e-32 145.6 106 65.1
Dinv26325 Davidia involucrata HOM05D007155 ORTHO05D003034 1.3e-32 145.6 113 61.1
Manes.09G079638 Manihot esculenta HOM05D007155 ORTHO05D003034 1.3e-32 145.6 601 76.4
Phvul.009G243700 Phaseolus vulgaris HOM05D007155 ORTHO05D003034 1.3e-32 145.6 139 56.8
Psat1g150440 Pisum sativum HOM05D007155 ORTHO05D003034 1.3e-32 145.6 122 60.7
Cc09_g05030 Coffea canephora HOM05D007155 ORTHO05D003034 3.0e-32 144.4 128 54.7
Potri.001G075900 Populus trichocarpa HOM05D007155 ORTHO05D003034 3.9e-32 144.1 125 58.4
Eucgr.D00014 Eucalyptus grandis HOM05D007155 ORTHO05D003034 1.5e-31 142.1 161 46.6
Atru.chr10.291 Acer truncatum HOM05D007155 ORTHO05D003034 2.5e-31 141.4 160 47.5
TPR.G29692 Trifolium pratense HOM05D007155 ORTHO05D003034 3.3e-31 141.0 124 58.1
FvH4_3g13070 Fragaria vesca HOM05D007155 ORTHO05D003034 4.3e-31 140.6 156 48.1
Peaxi162Scf00036g00084 Petunia axillaris HOM05D007155 ORTHO05D003034 4.3e-31 140.6 159 45.3
RcHm_v2.0_Chr5g0021261 Rosa chinensis HOM05D007155 ORTHO05D003034 4.3e-31 140.6 161 47.8
Sc17g0004280 Simmondsia chinensis HOM05D007155 ORTHO05D003034 4.3e-31 140.6 163 44.8
MD10G1226600 Malus domestica HOM05D007155 ORTHO05D003034 7.3e-31 139.8 119 57.1
Dinv06999 Davidia involucrata HOM05D007155 ORTHO05D003034 9.5e-31 139.4 113 59.3
FAN11G2573 Fragaria x ananassa HOM05D007155 ORTHO05D003034 9.5e-31 139.4 156 47.4
Potri.003G154800 Populus trichocarpa HOM05D007155 ORTHO05D003034 9.5e-31 139.4 161 46.6
TAR624G1337 Trochodendron aralioides HOM05D007155 ORTHO05D003034 9.5e-31 139.4 119 58.8
Migut.L00267 Erythranthe guttata HOM05D007155 ORTHO05D003034 2.1e-30 138.3 132 53.8
SalBow7G4478 Salvia bowleyana HOM05D007155 ORTHO05D003034 2.1e-30 138.3 159 45.3
FAN16G0835 Fragaria x ananassa HOM05D007155 ORTHO05D003034 2.8e-30 137.9 156 46.8
Migut.L00974 Erythranthe guttata HOM05D007155 ORTHO05D003034 3.6e-30 137.5 132 53.8
FAN21G1032 Fragaria x ananassa HOM05D007155 ORTHO05D003034 8.0e-30 136.3 156 46.8
PGR142G0445 Punica granatum HOM05D007155 ORTHO05D003034 3.1e-29 134.4 117 54.7
Sabra03G0112000 Salix brachista HOM05D007155 ORTHO05D003034 3.1e-29 134.4 119 55.5
PGSC0003DMG400007329 Solanum tuberosum HOM05D007155 ORTHO05D003034 3.1e-29 134.4 148 46.6
Gohir.D05G247200 Gossypium hirsutum HOM05D007155 ORTHO05D003034 8.9e-29 132.9 161 43.5
Gorai.009G258000 Gossypium raimondii HOM05D007155 ORTHO05D003034 8.9e-29 132.9 161 43.5
Lj6g0001159 Lotus japonicus HOM05D007155 ORTHO05D003034 1.2e-28 132.5 117 57.3
Thecc.02G002900 Theobroma cacao HOM05D007155 ORTHO05D003034 1.2e-28 132.5 606 76.1
BraA01t01129Z Brassica rapa HOM05D007155 ORTHO05D003034 2.6e-28 131.3 93 58.1
Gohir.A05G245700 Gossypium hirsutum HOM05D007155 ORTHO05D003034 2.6e-28 131.3 161 43.5
Nn1g07043 Nelumbo nucifera HOM05D007155 ORTHO05D003034 2.6e-28 131.3 146 48.6
A01p11870 Brassica napus HOM05D007155 ORTHO05D003034 3.4e-28 131.0 93 59.1
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 3.4e-28 131.0 93 60.2
CARHR226930 Cardamine hirsuta HOM05D007155 ORTHO05D003034 4.4e-28 130.6 94 57.4
Ciclev10014519m.g Citrus clementina HOM05D007155 ORTHO05D003034 4.4e-28 130.6 160 43.1
Sp7g18540 Schrenkiella parvula HOM05D007155 ORTHO05D003034 4.4e-28 130.6 93 60.2
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 5.8e-28 130.2 92 62.0
C01p14070 Brassica napus HOM05D007155 ORTHO05D003034 1.7e-27 128.6 93 55.9
Medtr2g035450 Medicago truncatula HOM05D007155 ORTHO05D003034 1.7e-27 128.6 110 57.3
Aa31LG6G2510 Aethionema arabicum HOM05D007155 ORTHO05D003034 2.9e-27 127.9 158 41.8
Carub.0007s2104 Capsella rubella HOM05D007155 ORTHO05D003034 2.9e-27 127.9 93 59.1
BolC1t01374H Brassica oleracea HOM05D007155 ORTHO05D003034 3.7e-27 127.5 95 53.7
AL7G33760 Arabidopsis lyrata HOM05D007155 ORTHO05D003034 4.9e-27 127.1 118 50.8
Duzib132G0118 Durio zibethinus HOM05D007155 ORTHO05D003034 4.9e-27 127.1 91 60.4
Aqoxy1G03675 Aquilegia oxysepala HOM05D007155 ORTHO05D003034 6.4e-27 126.7 115 55.7
SHI28075 Sapria himalayana HOM05D007155 ORTHO05D003034 1.1e-26 125.9 135 64.4
THA.LOC104811820 Tarenaya hassleriana HOM05D007155 ORTHO05D003034 1.1e-26 125.9 116 50.0
Ah.15g092760 Amaranthus hybridus HOM05D007155 ORTHO05D003034 1.9e-26 125.2 107 56.1
Thhalv10010168m.g Eutrema salsugineum HOM05D007155 ORTHO05D003034 1.9e-26 125.2 93 57.0
AT4G20090 Arabidopsis thaliana HOM05D007155 ORTHO05D003034 2.4e-26 124.8 93 58.1
Lalb_Chr15g0083701 Lupinus albus HOM05D007155 ORTHO05D003034 2.4e-26 124.8 110 58.2
MSTRG.22516 Avicennia marina HOM05D007155 ORTHO05D003034 3.2e-26 124.4 93 58.1
Nitab4.5_0000844g0300 Nicotiana tabacum HOM05D007155 ORTHO05D003034 5.4e-26 123.6 96 59.4
BcaNung06194 Brassica carinata HOM05D007155 ORTHO05D003034 7.0e-26 123.2 94 58.5
Lalb_Chr02g0154101 Lupinus albus HOM05D007155 ORTHO05D003034 1.6e-25 122.1 93 57.0
Lalb_Chr15g0083741 Lupinus albus HOM05D007155 ORTHO05D003034 1.6e-25 122.1 88 58.0
CANSAT21G2211 Cannabis sativa HOM05D007155 ORTHO05D003034 2.0e-25 121.7 159 44.0
CAN.G809.50 Capsicum annuum HOM05D007155 ORTHO05D003034 2.0e-25 121.7 142 42.3
Lalb_Chr02g0154121 Lupinus albus HOM05D007155 ORTHO05D003034 2.0e-25 121.7 110 57.3
Nitab4.5_0010610g0010 Nicotiana tabacum HOM05D007155 ORTHO05D003034 2.0e-25 121.7 93 51.6
Sopen02g026480 Solanum pennellii HOM05D007155 ORTHO05D003034 7.8e-25 119.8 100 57.0
Solyc02g081860.3 Solanum lycopersicum HOM05D007155 ORTHO05D003034 1.0e-24 119.4 96 58.3
Ca_01983_v3 Cicer arietinum L. HOM05D007155 ORTHO05D003034 1.3e-24 119.0 93 53.8
Manes.13G075956 Manihot esculenta HOM05D007155 ORTHO05D003034 1.3e-24 119.0 93 55.9
CANSAT35G0897 Cannabis sativa HOM05D007155 ORTHO05D003034 1.7e-24 118.6 118 50.0
SGA_v2.0_scaffold341G49370 Striga asiatica HOM05D007155 ORTHO05D002534 1.7e-24 118.6 123 47.2
EL10Ac7g17660 Beta vulgaris HOM05D007155 ORTHO05D003034 3.9e-24 117.5 106 54.7
Haze_05243 Corylus avellana HOM05D007155 ORTHO05D003034 5.0e-24 117.1 134 47.0
MBI02_g21862_MAGBIO Magnolia biondii HOM05D007155 ORTHO05D003034 4.3e-23 114.0 116 48.3
ATR0794G139 Amborella trichopoda HOM05D007155 ORTHO05D003034 2.8e-22 111.3 121 45.5
ClCG01G025760 Citrullus lanatus HOM05D007155 ORTHO05D003034 2.8e-22 111.3 118 47.5
FAN25G3588 Fragaria x ananassa HOM05D007155 ORTHO05D003034 4.7e-22 110.5 87 58.6
MELO3C021947.2 Cucumis melo HOM05D007155 ORTHO05D003034 1.1e-21 109.4 141 43.3
CsaV3_2G014420 Cucumis sativus L. HOM05D007155 ORTHO05D003034 2.3e-21 108.2 194 36.1
Sed0017393 Sechium edule HOM05D007155 ORTHO05D003034 3.1e-21 107.8 119 46.2
Prupe.4G118800 Prunus persica HOM05D007155 ORTHO05D003034 6.8e-21 106.7 82 61.0
SEGI_35562 Sequoiadendron giganteum HOM05D007155 ORTHO05D003034 3.5e-17 94.4 111 41.4
Hund12398 Selenicereus undatus HOM05D007155 ORTHO05D003034 2.3e-16 91.7 80 53.8
Os06g0499301 Oryza sativa ssp. japonica HOM05D007155 ORTHO05D003034 1.5e-15 89.0 94 43.6
Zm00001eb064820 Zea mays HOM05D007155 ORTHO05D003034 4.4e-12 77.4 95 40.0
Sed0006212 Sechium edule HOM05D007155 ORTHO05D003034 2.9e-11 74.7 101 40.6
HanXRQChr16g0518411 Helianthus annuus HOM05D002453 ORTHO05D002107 3.8e-11 74.3 110 35.5
HPP92_011144 Vanilla planifolia HOM05D007155 ORTHO05D003034 3.2e-10 71.2 94 34.0
Lsat_1_v5_gn_1_13300 Lactuca sativa HOM05D002453 ORTHO05D002107 6.0e-09 67.0 110 30.0
Phvul.008G197400 Phaseolus vulgaris HOM05D002453 ORTHO05D002107 1.0e-08 66.2 110 32.7
Nitab4.5_0000026g0050 Nicotiana tabacum HOM05D002453 ORTHO05D002107 1.3e-08 65.9 114 28.9
Peaxi162Scf00103g00021 Petunia axillaris HOM05D002453 ORTHO05D002107 1.3e-08 65.9 114 30.7
SEGI_16355 Sequoiadendron giganteum HOM05D004271 ORTHO05D006011 1.7e-08 65.5 110 28.2
PGR083G0367 Punica granatum HOM05D002453 ORTHO05D002107 2.3e-08 65.1 120 29.2
SEGI_15100 Sequoiadendron giganteum HOM05D002453 ORTHO05D002107 2.3e-08 65.1 111 34.2
ATR0618G313 Amborella trichopoda HOM05D007172 ORTHO05D009267 5.1e-08 63.9 110 32.7
Nitab4.5_0005983g0010 Nicotiana tabacum HOM05D002453 ORTHO05D002107 5.1e-08 63.9 114 28.1
Actinidia04897 Actinidia chinensis HOM05D002453 ORTHO05D002107 8.6e-08 63.2 110 30.0
CDE04G0992 Ceratophyllum demersum HOM05D000439 ORTHO05D009499 8.6e-08 63.2 109 31.2
AUR62021699 Chenopodium quinoa HOM05D002453 ORTHO05D002107 8.6e-08 63.2 109 32.1
Prupe.5G192300 Prunus persica HOM05D002453 ORTHO05D002107 8.6e-08 63.2 110 31.8
AUR62008396 Chenopodium quinoa HOM05D002453 ORTHO05D002107 1.9e-07 62.0 109 31.2
DCAR_016546 Daucus carota HOM05D002453 ORTHO05D002107 1.9e-07 62.0 94 33.0
Manes.08G087900 Manihot esculenta HOM05D007172 ORTHO05D009267 1.9e-07 62.0 110 28.2
SHI00109 Sapria himalayana HOM05D007409 ORTHO05D009264 1.9e-07 62.0 109 33.0
THA.LOC104813874 Tarenaya hassleriana HOM05D002453 ORTHO05D002107 1.9e-07 62.0 110 30.9
VMungo0647G1609 Vigna mungo HOM05D002453 ORTHO05D002107 1.9e-07 62.0 110 30.0
Ah.11g048530 Amaranthus hybridus HOM05D002453 ORTHO05D002107 2.5e-07 61.6 109 31.2
Lj5C111T12 Lonicera japonica HOM05D002453 ORTHO05D002107 2.5e-07 61.6 114 29.8
SHI00257 Sapria himalayana HOM05D002986 ORTHO05D007611 2.5e-07 61.6 89 29.2
arahy.Tifrunner.gnm1.ann1.M7R72C Arachis hypogaea HOM05D002737 ORTHO05D009499 3.3e-07 61.2 132 27.3
Sopen12g014610 Solanum pennellii HOM05D002453 ORTHO05D002107 3.3e-07 61.2 114 27.2
BcaC08g46987 Brassica carinata HOM05D002453 ORTHO05D002107 4.3e-07 60.8 110 31.8
Ca_21649_v3 Cicer arietinum L. HOM05D002737 ORTHO05D009499 4.3e-07 60.8 102 30.4
Psat4g051440 Pisum sativum HOM05D002453 ORTHO05D002107 4.3e-07 60.8 98 29.6
arahy.Tifrunner.gnm1.ann1.RRP5UF Arachis hypogaea HOM05D002737 ORTHO05D009499 5.6e-07 60.5 132 27.3
CAN.G1456.8 Capsicum annuum HOM05D002453 ORTHO05D002107 5.6e-07 60.5 114 28.1
COL.COLO4_24521 Corchorus olitorius HOM05D002453 ORTHO05D002107 5.6e-07 60.5 110 28.2
Hma1.2p1_0735F.1_g210570 Hydrangea macrophylla HOM05D002453 ORTHO05D002107 5.6e-07 60.5 110 30.9
Hma1.2p1_0735F.1_g210580 Hydrangea macrophylla HOM05D002453 ORTHO05D002107 5.6e-07 60.5 110 30.9
Phvul.008G197500 Phaseolus vulgaris HOM05D002737 ORTHO05D009499 5.6e-07 60.5 132 29.5
Sabra10G0181800 Salix brachista HOM05D002453 ORTHO05D002107 5.6e-07 60.5 105 33.3
Cfa018952 Carpinus fangiana HOM05D002453 ORTHO05D002107 7.3e-07 60.1 110 29.1
Eucgr.B00492 Eucalyptus grandis HOM05D002453 ORTHO05D002107 7.3e-07 60.1 110 29.1
CANSAT35G0540 Cannabis sativa HOM05D007172 ORTHO05D009267 9.6e-07 59.7 111 27.9
Glyma.17G099400 Glycine max HOM05D002453 ORTHO05D002107 9.6e-07 59.7 110 29.1
MSTRG.10167 Avicennia marina HOM05D007409 ORTHO05D009264 1.2e-06 59.3 101 32.7
CARHR067850 Cardamine hirsuta HOM05D002453 ORTHO05D002107 1.2e-06 59.3 106 32.1
Cc02_g13870 Coffea canephora HOM05D002986 ORTHO05D007611 1.2e-06 59.3 99 30.3
PGR083G2565 Punica granatum HOM05D002986 ORTHO05D007611 1.2e-06 59.3 99 29.3
TWI81G0810 Tripterygium wilfordii HOM05D002453 ORTHO05D002107 1.2e-06 59.3 110 30.0
Aqoxy3G03369 Aquilegia oxysepala HOM05D002453 ORTHO05D002107 1.6e-06 58.9 110 29.1
EL10Ac5g10989 Beta vulgaris HOM05D002453 ORTHO05D002107 1.6e-06 58.9 118 28.8
A07p40350 Brassica napus HOM05D002453 ORTHO05D002107 1.6e-06 58.9 106 32.1
C06p48690 Brassica napus HOM05D002453 ORTHO05D002107 1.6e-06 58.9 106 32.1
BolC6t39902H Brassica oleracea HOM05D002453 ORTHO05D002107 1.6e-06 58.9 106 32.1
BraA07t31576Z Brassica rapa HOM05D002453 ORTHO05D002107 1.6e-06 58.9 106 32.1
Glyma.02G281800 Glycine max HOM05D002737 ORTHO05D009499 1.6e-06 58.9 79 39.2
Haze_07333 Corylus avellana HOM05D002453 ORTHO05D002107 2.1e-06 58.5 110 29.1
Gohir.D12G179500 Gossypium hirsutum HOM05D002453 ORTHO05D002107 2.1e-06 58.5 94 29.8
ATR1089G116 Amborella trichopoda HOM05D002737 ORTHO05D009499 2.8e-06 58.2 80 35.0
Ca_21825_v3 Cicer arietinum L. HOM05D002453 ORTHO05D002107 2.8e-06 58.2 94 28.7
Haze_06370 Corylus avellana HOM05D002986 ORTHO05D007611 2.8e-06 58.2 99 29.3
Haze_06964 Corylus avellana HOM05D002737 ORTHO05D009499 2.8e-06 58.2 132 28.0
Duzib205G1690 Durio zibethinus HOM05D002453 ORTHO05D002107 2.8e-06 58.2 94 30.9
MD06G1192500 Malus domestica HOM05D002453 ORTHO05D002107 2.8e-06 58.2 110 29.1
Cfa000079 Carpinus fangiana HOM05D002737 ORTHO05D009499 3.6e-06 57.8 132 28.0
CDE06G2834 Ceratophyllum demersum HOM05D002453 ORTHO05D002107 3.6e-06 57.8 110 30.0
Gorai.008G192600 Gossypium raimondii HOM05D002453 ORTHO05D002107 3.6e-06 57.8 94 29.8
Lalb_Chr10g0106441 Lupinus albus HOM05D002737 ORTHO05D009499 3.6e-06 57.8 82 32.9
Hund11993 Selenicereus undatus HOM05D007409 ORTHO05D009264 3.6e-06 57.8 109 31.2
SGA_v2.0_scaffold64G22096 Striga asiatica HOM05D007409 ORTHO05D009264 3.6e-06 57.8 108 31.5
TAR371G0278 Trochodendron aralioides HOM05D002453 ORTHO05D002107 3.6e-06 57.8 110 28.2
VMungo0647G0538 Vigna mungo HOM05D002737 ORTHO05D009499 3.6e-06 57.8 134 28.4
AL2G34470 Arabidopsis lyrata HOM05D002453 ORTHO05D002107 4.7e-06 57.4 106 30.2
CiPaw.10G079400 Carya illinoinensis HOM05D002737 ORTHO05D009499 4.7e-06 57.4 132 28.8
Nn1g09793 Nelumbo nucifera HOM05D002453 ORTHO05D002107 4.7e-06 57.4 110 28.2
Dinv17357 Davidia involucrata HOM05D002986 ORTHO05D007611 6.2e-06 57.0 94 31.9
MBI11_g00911_MAGBIO Magnolia biondii HOM05D002986 ORTHO05D007611 6.2e-06 57.0 94 33.0
QL10p016708 Quercus lobata HOM05D002453 ORTHO05D002107 6.2e-06 57.0 94 29.8
TPR.G8770 Trifolium pratense HOM05D002737 ORTHO05D009499 6.2e-06 57.0 132 26.5
Aqoxy1G00388 Aquilegia oxysepala HOM05D002986 ORTHO05D007611 8.1e-06 56.6 94 29.8
AT1G74580 Arabidopsis thaliana HOM05D002453 ORTHO05D002107 8.1e-06 56.6 106 31.1
CiPaw.09G206300 Carya illinoinensis HOM05D007172 ORTHO05D009267 8.1e-06 56.6 108 26.9
FAN08G1232 Fragaria x ananassa HOM05D002453 ORTHO05D002107 8.1e-06 56.6 114 28.9
FAN18G2707 Fragaria x ananassa HOM05D002453 ORTHO05D002107 8.1e-06 56.6 114 28.9
Manes.14G077600 Manihot esculenta HOM05D002453 ORTHO05D002107 8.1e-06 56.6 94 30.9
TPR.G18613 Trifolium pratense HOM05D007409 ORTHO05D009264 8.1e-06 56.6 109 28.4


User provided reference genes

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