Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 7.6e-129 463.8 223 100.0
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.0e-104 383.6 220 81.4
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.0e-101 373.6 223 77.1
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 5.2e-93 344.7 214 74.8
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 7.0e-90 334.3 215 68.8
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.2e-89 333.6 216 70.4
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 5.9e-89 331.3 216 70.8
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 6.5e-88 327.8 215 69.8
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 4.2e-87 325.1 219 68.9
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 5.5e-87 324.7 218 66.5
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.2e-86 323.6 217 67.3
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.2e-86 323.6 213 67.1
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.1e-86 322.8 215 66.0
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 2.1e-86 322.8 217 67.3
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 3.6e-86 322.0 215 66.5
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 8.0e-86 320.9 221 67.0
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 8.0e-86 320.9 221 66.5
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.0e-85 320.5 220 68.2
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.0e-85 320.5 221 67.0
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.4e-85 320.1 218 67.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.8e-85 319.7 217 63.6
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 2.3e-85 319.3 216 67.1
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 4.0e-85 318.5 217 65.9
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 6.8e-85 317.8 210 67.6
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 6.8e-85 317.8 217 65.9
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 6.8e-85 317.8 213 66.2
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 8.8e-85 317.4 221 66.5
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.2e-84 317.0 215 65.6
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.2e-84 317.0 215 67.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 2.0e-84 316.2 217 62.7
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 2.6e-84 315.8 217 65.4
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 2.6e-84 315.8 220 67.3
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.6e-84 315.8 219 66.2
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 3.4e-84 315.5 217 65.9
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 3.4e-84 315.5 215 67.9
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 5.7e-84 314.7 216 65.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.5e-84 314.3 210 64.8
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 2.2e-83 312.8 233 63.5
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 2.8e-83 312.4 211 67.3
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 2.8e-83 312.4 217 65.4
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.4e-82 310.1 214 63.1
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 4.5e-81 305.1 216 65.7
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.0e-80 303.9 210 65.7
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.7e-80 303.1 215 66.5
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.7e-80 303.1 211 64.9
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.9e-80 302.4 218 64.2
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 6.5e-80 301.2 215 63.7
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 6.5e-80 301.2 210 66.2
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.1e-79 300.4 213 61.5
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.1e-79 300.4 220 61.4
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.5e-79 300.1 215 61.9
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 3.2e-79 298.9 225 62.7
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 3.2e-79 298.9 223 62.8
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 4.2e-79 298.5 215 61.9
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.2e-79 298.5 216 63.0
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 4.2e-79 298.5 218 63.3
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 7.2e-79 297.7 215 63.3
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 7.2e-79 297.7 200 68.0
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 9.4e-79 297.4 213 65.3
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 9.4e-79 297.4 183 71.0
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 1.2e-78 297.0 215 63.7
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.2e-78 297.0 271 52.8
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 3.6e-78 295.4 215 61.4
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 3.6e-78 295.4 215 60.9
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 4.7e-78 295.0 215 60.9
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 6.1e-78 294.7 215 62.3
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 6.1e-78 294.7 219 61.2
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.0e-77 293.9 215 59.5
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 1.0e-77 293.9 214 63.1
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.8e-77 293.1 213 62.4
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 5.2e-77 291.6 214 64.5
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 3.4e-76 288.9 215 60.5
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 3.4e-76 288.9 215 60.5
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 3.4e-76 288.9 215 60.5
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 5.7e-76 288.1 213 61.5
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 7.5e-76 287.7 215 59.5
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.3e-75 287.0 215 60.0
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.3e-75 287.0 210 59.5
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.8e-75 285.8 215 59.1
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 4.9e-75 285.0 208 63.5
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 6.3e-75 284.6 210 60.5
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 2.7e-73 279.3 213 60.1
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 3.5e-73 278.9 214 58.4
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 7.7e-73 277.7 212 60.8
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 2.3e-72 276.2 215 61.9
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 2.9e-72 275.8 213 59.2
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 6.6e-72 274.6 217 57.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 8.6e-72 274.2 213 59.2
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 8.0e-70 267.7 196 63.3
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 5.2e-69 265.0 223 55.2
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 7.5e-68 261.2 215 56.3
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 9.8e-68 260.8 173 64.7
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 2.9e-67 259.2 213 54.9
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 3.7e-67 258.8 211 55.0
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 3.2e-66 255.8 222 54.1
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.6e-62 243.4 173 64.7
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 2.1e-62 243.0 242 47.5
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.4e-61 240.4 213 53.5
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 2.0e-60 236.5 218 50.9
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.0e-60 236.5 179 62.0
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 7.5e-60 234.6 172 63.4
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.7e-59 233.4 173 57.8
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.7e-59 232.3 218 49.5
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 3.5e-57 225.7 209 53.6
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.0e-56 221.9 152 65.8
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 5.0e-56 221.9 219 45.2
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.3e-55 219.2 208 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 2.3e-53 213.0 221 47.5
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.9e-50 203.4 210 46.7
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 4.1e-50 202.2 157 61.1
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.2e-49 200.7 210 47.6
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 3.0e-48 196.1 155 61.3
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 3.3e-47 192.6 184 51.1
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 7.6e-44 181.4 213 42.7
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 4.9e-43 178.7 136 58.8
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 4.1e-42 175.6 162 52.5
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.2e-36 157.5 112 61.6
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.3e-30 137.5 227 30.8
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 4.5e-28 129.0 133 49.6
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 4.2e-26 122.5 82 65.9
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 6.2e-22 108.6 92 55.4
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 9.3e-18 94.7 217 28.6
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.8e-13 80.5 90 45.6
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.0e-11 74.7 61 55.7
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 1.3e-11 74.3 120 30.0
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 2.5e-10 70.1 44 61.4
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 9.3e-10 68.2 76 50.0
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.2e-09 67.8 62 50.0


User provided reference genes

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