Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.1e-87 326.6 170 100.0
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 3.5e-49 198.7 160 74.4
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 4.0e-45 185.3 174 65.5
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 1.2e-38 163.7 169 59.8
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 1.2e-38 163.7 168 60.1
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 4.7e-38 161.8 167 60.5
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 6.2e-38 161.4 145 64.1
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 1.1e-37 160.6 162 61.7
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.4e-37 160.2 176 59.1
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.8e-37 159.8 190 56.3
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-37 159.5 176 58.0
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 4.0e-37 158.7 170 55.9
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 5.2e-37 158.3 184 53.8
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 6.8e-37 157.9 173 55.5
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.8e-37 157.9 173 55.5
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 8.9e-37 157.5 184 56.5
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 8.9e-37 157.5 144 64.6
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 8.9e-37 157.5 144 64.6
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 1.2e-36 157.1 117 72.6
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 1.2e-36 157.1 119 73.1
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 1.5e-36 156.8 117 72.6
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.5e-36 156.8 183 53.6
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 2.0e-36 156.4 125 69.6
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 2.0e-36 156.4 168 56.5
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 2.6e-36 156.0 167 57.5
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 3.4e-36 155.6 172 56.4
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 3.4e-36 155.6 119 72.3
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 4.4e-36 155.2 118 72.0
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 4.4e-36 155.2 121 70.2
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 4.4e-36 155.2 138 65.9
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 4.4e-36 155.2 138 65.9
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 4.4e-36 155.2 144 65.3
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 5.8e-36 154.8 121 70.2
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 5.8e-36 154.8 126 68.3
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 7.5e-36 154.5 150 59.3
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 7.5e-36 154.5 150 59.3
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 7.5e-36 154.5 150 59.3
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 7.5e-36 154.5 125 68.8
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 9.8e-36 154.1 179 53.6
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 9.8e-36 154.1 120 70.8
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 9.8e-36 154.1 172 57.6
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 1.3e-35 153.7 163 57.7
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.7e-35 153.3 122 68.9
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 1.7e-35 153.3 175 54.9
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.2e-35 152.9 146 64.4
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 2.2e-35 152.9 119 69.7
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.9e-35 152.5 146 64.4
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 3.7e-35 152.1 119 70.6
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 4.9e-35 151.8 145 57.9
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 4.9e-35 151.8 119 70.6
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 6.4e-35 151.4 119 70.6
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 6.4e-35 151.4 119 68.1
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.1e-34 150.6 119 68.9
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.1e-34 150.6 171 55.6
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.1e-34 150.6 145 65.5
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 1.9e-34 149.8 141 64.5
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 2.4e-34 149.4 118 71.2
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 2.4e-34 149.4 128 66.4
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 2.4e-34 149.4 174 55.2
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 5.4e-34 148.3 124 67.7
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 5.4e-34 148.3 162 53.1
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 7.1e-34 147.9 118 67.8
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 7.1e-34 147.9 118 68.6
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 7.1e-34 147.9 166 55.4
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 9.2e-34 147.5 184 52.7
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.6e-33 146.7 124 66.9
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.6e-33 146.7 168 56.5
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 2.1e-33 146.4 139 61.9
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 2.7e-33 146.0 169 53.3
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 3.5e-33 145.6 119 69.7
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 3.5e-33 145.6 123 65.9
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 7.8e-33 144.4 127 65.4
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 7.8e-33 144.4 150 58.7
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.0e-32 144.1 126 65.9
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 3.9e-32 142.1 137 62.0
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 5.1e-32 141.7 124 65.3
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 5.1e-32 141.7 126 63.5
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 6.6e-32 141.4 132 62.1
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 1.1e-31 140.6 162 54.3
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 1.1e-31 140.6 139 65.5
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 1.1e-31 140.6 145 60.7
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.9e-31 139.8 136 63.2
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 2.5e-31 139.4 135 63.0
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 3.3e-31 139.0 123 63.4
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.6e-31 138.3 140 58.6
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 1.6e-30 136.7 130 60.8
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 2.8e-30 136.0 136 61.0
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 4.7e-30 135.2 101 72.3
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 4.7e-30 135.2 141 58.9
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 8.9e-29 131.0 152 54.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 8.9e-29 131.0 87 79.3
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 4.4e-28 128.6 98 70.4
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 7.6e-28 127.9 151 51.7
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 9.9e-28 127.5 143 55.2
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 3.8e-27 125.6 99 66.7
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 7.1e-26 121.3 146 52.1
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 7.1e-26 121.3 146 52.1
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.3e-24 117.1 123 56.1
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 3.0e-24 115.9 141 51.8
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 3.9e-24 115.5 122 58.2
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 6.6e-24 114.8 118 58.5
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 6.2e-22 108.2 130 55.4
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 5.2e-21 105.1 108 56.5
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 3.8e-19 99.0 117 47.9
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 1.4e-18 97.1 94 60.6
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 5.4e-18 95.1 82 65.9
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.6e-17 92.0 80 66.2
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 3.9e-16 89.0 136 43.4
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 5.1e-16 88.6 80 65.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 1.5e-15 87.0 120 45.8
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.0e-13 79.0 106 43.4
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 4.5e-12 75.5 79 57.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 6.4e-11 71.6 89 51.7
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.4e-10 70.5 100 49.0


User provided reference genes

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