Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 6.1e-51 203.8 96 100.0
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.7e-45 185.7 92 93.5
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 4.1e-39 164.5 91 80.2
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 4.1e-39 164.5 91 80.2
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 7.0e-39 163.7 95 76.8
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.2e-38 162.9 91 79.1
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 2.7e-38 161.8 87 82.8
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 4.5e-38 161.0 94 77.7
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 4.5e-38 161.0 87 81.6
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 4.5e-38 161.0 91 76.9
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 4.5e-38 161.0 94 76.6
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.9e-38 160.6 90 81.1
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 1.0e-37 159.8 87 80.5
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.0e-37 159.8 93 78.5
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 1.3e-37 159.5 96 77.1
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.3e-37 159.5 90 80.0
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.7e-37 159.1 97 77.3
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.3e-37 158.7 87 80.5
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 2.3e-37 158.7 85 81.2
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 2.9e-37 158.3 87 80.5
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 2.9e-37 158.3 90 75.6
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 2.9e-37 158.3 87 80.5
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 3.9e-37 157.9 91 79.1
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 3.9e-37 157.9 91 75.8
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 3.9e-37 157.9 84 81.0
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 5.0e-37 157.5 87 78.2
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 5.0e-37 157.5 96 71.9
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 5.0e-37 157.5 96 75.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 6.6e-37 157.1 94 74.5
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 6.6e-37 157.1 97 77.3
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 6.6e-37 157.1 91 76.9
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.6e-37 157.1 92 77.2
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.6e-37 157.1 92 77.2
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 8.6e-37 156.8 96 76.0
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 8.6e-37 156.8 88 77.3
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 8.6e-37 156.8 87 79.3
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 8.6e-37 156.8 86 81.4
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 8.6e-37 156.8 86 81.4
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 1.1e-36 156.4 86 77.9
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 1.1e-36 156.4 90 74.4
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 1.1e-36 156.4 84 84.5
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 1.1e-36 156.4 86 77.9
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 1.1e-36 156.4 86 77.9
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.5e-36 156.0 88 78.4
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 1.5e-36 156.0 88 76.1
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.9e-36 155.6 87 79.3
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 2.5e-36 155.2 90 75.6
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 2.5e-36 155.2 91 73.6
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 2.5e-36 155.2 87 78.2
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 2.5e-36 155.2 87 78.2
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 3.3e-36 154.8 94 75.5
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 3.3e-36 154.8 90 75.6
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 3.3e-36 154.8 90 74.4
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 3.3e-36 154.8 91 76.9
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 4.3e-36 154.5 90 78.9
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 5.6e-36 154.1 94 75.5
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 7.3e-36 153.7 94 75.5
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 7.3e-36 153.7 93 75.3
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 7.3e-36 153.7 93 75.3
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 7.3e-36 153.7 93 75.3
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 7.3e-36 153.7 88 78.4
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 7.3e-36 153.7 93 74.2
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 9.5e-36 153.3 85 78.8
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 1.2e-35 152.9 94 74.5
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 1.2e-35 152.9 91 75.8
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 1.2e-35 152.9 85 78.8
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.6e-35 152.5 93 74.2
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 1.6e-35 152.5 91 74.7
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 2.1e-35 152.1 85 77.6
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.8e-35 151.8 83 79.5
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.8e-35 151.8 83 79.5
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.8e-35 151.8 83 79.5
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 3.6e-35 151.4 92 73.9
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 4.7e-35 151.0 94 73.4
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 4.7e-35 151.0 85 76.5
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 4.7e-35 151.0 85 76.5
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 4.7e-35 151.0 96 71.9
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.7e-35 151.0 81 84.0
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 4.7e-35 151.0 85 77.6
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 6.1e-35 150.6 85 78.8
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 6.1e-35 150.6 94 73.4
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 8.0e-35 150.2 96 75.0
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 8.0e-35 150.2 93 73.1
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 1.4e-34 149.4 85 75.3
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 1.4e-34 149.4 91 73.6
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 1.4e-34 149.4 91 73.6
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 1.4e-34 149.4 91 73.6
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 1.4e-34 149.4 91 73.6
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 2.3e-34 148.7 94 73.4
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 4.0e-34 147.9 91 72.5
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 6.8e-34 147.1 96 68.8
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 8.9e-34 146.7 89 74.2
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.2e-33 146.4 84 73.8
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.2e-33 146.4 79 79.7
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 2.0e-33 145.6 85 72.9
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 4.4e-33 144.4 90 71.1
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 5.8e-33 144.1 83 73.5
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 4.9e-32 141.0 85 71.8
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 8.3e-32 140.2 81 71.6
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 8.3e-32 140.2 85 71.8
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 8.3e-32 140.2 85 71.8
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 1.9e-31 139.0 86 72.1
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 3.2e-31 138.3 94 67.0
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 4.1e-31 137.9 81 71.6
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 9.2e-31 136.7 93 71.0
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 1.2e-30 136.3 71 81.7
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 2.0e-30 135.6 93 66.7
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 6.0e-30 134.0 93 65.6
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 7.8e-30 133.7 92 68.5
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 7.8e-30 133.7 93 66.7
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 2.3e-29 132.1 75 76.0
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 4.3e-28 127.9 72 75.0
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 6.2e-27 124.0 91 63.7
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 8.9e-26 120.2 84 65.5
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 7.5e-25 117.1 91 59.3
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 9.8e-25 116.7 89 60.7
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 3.0e-21 105.1 84 53.6
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.1e-21 104.4 70 68.6
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.1e-21 104.4 70 68.6
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.1e-20 103.2 63 69.8
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 8.1e-19 97.1 82 50.0
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 3.4e-17 91.7 78 52.6
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 2.3e-13 79.0 78 43.6
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 3.9e-13 78.2 80 43.8
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 5.1e-13 77.8 42 76.2
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 3.4e-09 65.1 87 48.3
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 2.2e-08 62.4 41 73.2
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 4.6e-06 54.7 56 44.6
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 6.0e-06 54.3 36 72.2


User provided reference genes

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