Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0397 Erigeron canadensis HOM05D003457 ORTHO05D009249 1.0e-132 476.9 257 100.0
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 3.9e-28 129.4 266 36.8
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.7e-28 128.6 266 36.5
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-27 127.9 272 36.0
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 1.6e-26 124.0 266 36.1
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.3e-26 122.1 236 39.0
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 7.4e-19 98.6 271 31.4
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.5e-11 74.3 218 29.8
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 2.6e-11 73.6 229 28.4
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 3.3e-11 73.2 212 29.7
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 3.3e-11 73.2 200 30.5
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.4e-11 72.0 212 30.7
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 9.7e-11 71.6 212 29.7
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 4.8e-10 69.3 258 28.7
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 4.8e-10 69.3 206 33.0
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 6.3e-10 68.9 242 27.7
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 8.2e-10 68.6 64 56.2
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 1.8e-09 67.4 193 37.8
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 2.4e-09 67.0 200 27.5
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 2.4e-09 67.0 204 28.4
Lsat_1_v5_gn_7_39641 Lactuca sativa HOM05D003457 ORTHO05D009249 2.4e-09 67.0 221 29.4
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 4.1e-09 66.2 190 28.9
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 5.3e-09 65.9 53 60.4
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 9.1e-09 65.1 201 37.3
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 9.1e-09 65.1 51 60.8
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 9.1e-09 65.1 201 28.4
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 1.6e-08 64.3 195 37.9
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 1.6e-08 64.3 48 62.5
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 1.6e-08 64.3 48 62.5
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.6e-08 64.3 189 30.2
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.6e-08 64.3 205 30.2
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 1.6e-08 64.3 231 27.3
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 2.0e-08 63.9 96 37.5
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 2.6e-08 63.5 184 28.3
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 2.6e-08 63.5 51 56.9
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 2.6e-08 63.5 244 26.6
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 4.5e-08 62.8 48 60.4
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 4.5e-08 62.8 48 60.4
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 4.5e-08 62.8 202 36.6
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 5.9e-08 62.4 220 29.1
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 5.9e-08 62.4 227 30.8
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 7.7e-08 62.0 195 40.0
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 7.7e-08 62.0 220 28.6
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 1.0e-07 61.6 245 29.0
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 1.3e-07 61.2 194 36.1
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.3e-07 61.2 223 27.4
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.3e-07 61.2 223 27.4
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.3e-07 61.2 223 27.4
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.3e-07 61.2 220 27.7
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 1.3e-07 61.2 298 24.8
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.7e-07 60.8 87 37.9
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 2.2e-07 60.5 51 52.9
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.2e-07 60.5 200 26.5
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.9e-07 60.1 275 28.0
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 3.8e-07 59.7 201 27.4
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 3.8e-07 59.7 214 29.4
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 3.8e-07 59.7 82 46.3
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 3.8e-07 59.7 265 26.8
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 5.0e-07 59.3 214 29.0
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 6.5e-07 58.9 213 27.2
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 6.5e-07 58.9 95 40.0
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 6.5e-07 58.9 184 27.2
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 8.5e-07 58.5 87 37.9
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 8.5e-07 58.5 229 27.1
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.1e-06 58.2 52 53.8
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 1.1e-06 58.2 226 29.2
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 1.1e-06 58.2 182 26.9
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 1.5e-06 57.8 41 65.9
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 1.5e-06 57.8 88 36.4
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 1.5e-06 57.8 88 36.4
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.9e-06 57.4 241 25.7
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 1.9e-06 57.4 241 25.7
ECA233G2997 Erigeron canadensis HOM05D003457 ORTHO05D009249 3.2e-06 56.6 92 39.1
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.2e-06 56.6 212 31.6
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 4.2e-06 56.2 184 28.3
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 4.2e-06 56.2 179 27.9
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 5.5e-06 55.8 91 37.4
Lsat_1_v5_gn_5_150000 Lactuca sativa HOM05D003457 ORTHO05D009249 5.5e-06 55.8 193 29.0
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 5.5e-06 55.8 52 51.9
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 7.2e-06 55.5 200 25.0
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 9.4e-06 55.1 98 39.8
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 9.4e-06 55.1 220 26.4


User provided reference genes

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