Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0382 Erigeron canadensis HOM05D003915 ORTHO05D005386 0.0e+00 1189.9 621 100.0
ECA234G1757 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.1e-74 283.1 383 40.5
ECA234G4739 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-52 210.3 372 36.0
ECA246G3950 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-45 187.2 187 51.9
ECA247G0143 Erigeron canadensis HOM05D003915 ORTHO05D005386 1.2e-43 182.2 198 49.0
ECA233G2306 Erigeron canadensis HOM05D000296 ORTHO05D000175 2.0e-41 174.9 228 43.0
ECA232G3499 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-39 169.1 483 29.8
HanXRQChr05g0132981 Helianthus annuus HOM05D003915 ORTHO05D005386 4.4e-25 120.6 612 23.9
HanXRQChr07g0188391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-22 112.5 387 25.1
HanXRQChr11g0329921 Helianthus annuus HOM05D003915 ORTHO05D005386 1.9e-20 105.1 403 27.8
HanXRQChr13g0391411 Helianthus annuus HOM05D000003 ORTHO05D000004 2.8e-19 101.3 357 26.3
ECA233G3171 Erigeron canadensis HOM05D000002 ORTHO05D000004 1.1e-18 99.4 179 34.6
HanXRQChr07g0203291 Helianthus annuus HOM05D000003 ORTHO05D000004 5.2e-18 97.1 388 25.5
Lsat_1_v5_gn_0_15061 Lactuca sativa HOM05D003915 ORTHO05D005386 6.8e-18 96.7 386 25.1
HanXRQChr10g0309431 Helianthus annuus HOM05D003915 ORTHO05D005386 8.9e-18 96.3 364 24.5
HanXRQChr10g0307071 Helianthus annuus HOM05D003915 ORTHO05D005386 2.6e-17 94.7 380 25.5
ECA232G0938 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.4e-17 94.4 333 25.5
HanXRQChr03g0092381 Helianthus annuus HOM05D003915 ORTHO05D001516 3.4e-17 94.4 334 24.0
HanXRQChr12g0362641 Helianthus annuus HOM05D003915 ORTHO05D005386 3.4e-17 94.4 362 26.0
Lsat_1_v5_gn_2_126760 Lactuca sativa HOM05D003915 ORTHO05D005386 5.8e-17 93.6 378 25.7
Lsat_1_v5_gn_5_131521 Lactuca sativa HOM05D003915 ORTHO05D001516 1.7e-16 92.0 373 23.3
HanXRQChr03g0078981 Helianthus annuus HOM05D003915 ORTHO05D001516 2.2e-16 91.7 440 21.8
HanXRQChr01g0005411 Helianthus annuus HOM05D003915 ORTHO05D005386 3.7e-16 90.9 346 24.6
HanXRQChr03g0068571 Helianthus annuus HOM05D003915 ORTHO05D005386 6.4e-16 90.1 342 23.7
Lsat_1_v5_gn_2_130020 Lactuca sativa HOM05D003915 ORTHO05D005386 6.4e-16 90.1 354 24.9
HanXRQChr08g0228311 Helianthus annuus HOM05D003915 ORTHO05D005386 3.2e-15 87.8 357 26.3
HanXRQChr10g0280261 Helianthus annuus HOM05D003915 ORTHO05D005386 4.1e-15 87.4 375 24.3
ECA246G3612 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.2e-14 85.9 168 32.1
Lsat_1_v5_gn_8_26961 Lactuca sativa HOM05D003915 ORTHO05D005386 1.2e-14 85.9 363 24.2
ECA232G0418 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.6e-14 85.5 450 24.2
ECA240G4012 Erigeron canadensis HOM05D003915 ORTHO05D005386 2.7e-14 84.7 232 28.0
HanXRQChr05g0136121 Helianthus annuus HOM05D000003 ORTHO05D000004 4.6e-14 84.0 349 22.3
Lsat_1_v5_gn_8_106980 Lactuca sativa HOM05D003915 ORTHO05D005386 4.6e-14 84.0 351 24.2
ECA233G2859 Erigeron canadensis HOM05D062464 ORTHO05D005386 6.0e-14 83.6 116 39.7
ECA240G1637 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.0e-14 83.6 332 24.7
ECA248G2000 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.8e-14 83.2 157 34.4
HanXRQChr08g0227851 Helianthus annuus HOM05D000003 ORTHO05D000004 3.0e-13 81.3 345 22.9
Lsat_1_v5_gn_1_47520 Lactuca sativa HOM05D003915 ORTHO05D005386 3.9e-13 80.9 372 23.9
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 5.1e-13 80.5 316 23.7
HanXRQChr06g0166111 Helianthus annuus HOM05D003915 ORTHO05D001516 6.6e-13 80.1 401 24.2
HanXRQChr16g0525111 Helianthus annuus HOM05D003915 ORTHO05D005386 6.6e-13 80.1 335 24.2
ECA232G4463 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.6e-13 79.7 97 43.3
ECA240G0224 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.6e-13 79.7 165 30.9
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-12 79.3 565 22.7
HanXRQChr12g0376001 Helianthus annuus HOM05D000003 ORTHO05D000004 1.5e-12 79.0 352 22.7
Lsat_1_v5_gn_6_45961 Lactuca sativa HOM05D003915 ORTHO05D005386 1.5e-12 79.0 333 25.5
ECA248G3810 Erigeron canadensis HOM05D003915 ORTHO05D005386 4.3e-12 77.4 308 24.4
ECA232G4385 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.3e-12 76.6 347 24.2
ECA232G4857 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.8e-11 74.7 124 41.1
HanXRQChr14g0428581 Helianthus annuus HOM05D003915 ORTHO05D005386 2.8e-11 74.7 415 22.4
Lsat_1_v5_gn_4_158101 Lactuca sativa HOM05D003915 ORTHO05D005386 2.8e-11 74.7 457 22.8
ECA232G2828 Erigeron canadensis HOM05D000003 ORTHO05D005386 4.7e-11 73.9 403 23.6
Lsat_1_v5_gn_9_62980 Lactuca sativa HOM05D003915 ORTHO05D005386 4.7e-11 73.9 355 23.9
HanXRQChr15g0482051 Helianthus annuus HOM05D003915 ORTHO05D005386 1.4e-10 72.4 464 23.3
Lsat_1_v5_gn_1_51800 Lactuca sativa HOM05D003915 ORTHO05D005386 1.8e-10 72.0 259 25.1
ECA234G1839 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.0e-10 70.9 343 22.7
HanXRQChr12g0362171 Helianthus annuus HOM05D003915 ORTHO05D005386 5.2e-10 70.5 324 23.5
Lsat_1_v5_gn_4_143721 Lactuca sativa HOM05D003915 ORTHO05D005386 8.9e-10 69.7 441 23.1
Lsat_1_v5_gn_6_61781 Lactuca sativa HOM05D003915 ORTHO05D005386 8.9e-10 69.7 333 24.9
ECA247G1369 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.2e-09 69.3 131 35.1
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-09 69.3 400 21.0
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-09 69.3 305 22.3
Lsat_1_v5_gn_8_76080 Lactuca sativa HOM05D003915 ORTHO05D005386 1.5e-09 68.9 133 29.3
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.5e-09 68.9 303 20.8
Lsat_1_v5_gn_2_75660 Lactuca sativa HOM05D003915 ORTHO05D005386 2.0e-09 68.6 347 24.5
Lsat_1_v5_gn_3_90821 Lactuca sativa HOM05D003915 ORTHO05D005386 2.0e-09 68.6 311 24.1
ECA247G3751 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.6e-09 68.2 462 22.3
Lsat_1_v5_gn_3_28940 Lactuca sativa HOM05D003915 ORTHO05D005386 4.4e-09 67.4 433 23.1
Lsat_1_v5_gn_6_27160 Lactuca sativa HOM05D003915 ORTHO05D005386 4.4e-09 67.4 188 25.0
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.4e-09 67.4 288 22.9
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.8e-09 67.0 285 23.2
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-08 65.9 288 21.9
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-08 65.9 304 21.7
Phvul.001G122700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-08 65.5 294 22.8
Lsat_1_v5_gn_3_49820 Lactuca sativa HOM05D003915 ORTHO05D005386 2.9e-08 64.7 304 26.0
ECA247G0472 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.4e-08 63.5 100 34.0
Lsat_1_v5_gn_2_124920 Lactuca sativa HOM05D003915 ORTHO05D005386 6.4e-08 63.5 219 28.3
Lsat_1_v5_gn_2_125141 Lactuca sativa HOM05D008939 ORTHO05D001516 6.4e-08 63.5 395 22.5
Lsat_1_v5_gn_2_13360 Lactuca sativa HOM05D003915 ORTHO05D005386 1.1e-07 62.8 242 25.2
EL10Ac7g17245 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-07 62.4 507 23.3
Lsat_1_v5_gn_4_45380 Lactuca sativa HOM05D003915 ORTHO05D005386 1.9e-07 62.0 154 29.2
Lsat_1_v5_gn_5_153820 Lactuca sativa HOM05D003915 ORTHO05D005386 1.9e-07 62.0 123 32.5
Lsat_1_v5_gn_8_31381 Lactuca sativa HOM05D003915 ORTHO05D005386 1.9e-07 62.0 105 32.4
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.9e-07 62.0 324 23.5
ECA247G1656 Erigeron canadensis HOM05D002777 ORTHO05D045201 2.4e-07 61.6 75 41.3
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 2.4e-07 61.6 439 19.6
ECA247G2767 Erigeron canadensis HOM05D062464 ORTHO05D005386 4.1e-07 60.8 99 34.3
Lsat_1_v5_gn_3_121940 Lactuca sativa HOM05D003915 ORTHO05D005386 4.1e-07 60.8 129 27.9
Lsat_1_v5_gn_8_156261 Lactuca sativa HOM05D003915 ORTHO05D005386 4.1e-07 60.8 368 19.8
Lsat_1_v5_gn_5_169341 Lactuca sativa HOM05D003915 ORTHO05D005386 5.4e-07 60.5 147 29.3
Lsat_1_v5_gn_6_110901 Lactuca sativa HOM05D003915 ORTHO05D005386 5.4e-07 60.5 278 22.7
Phvul.001G152700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.1e-07 60.1 278 22.3
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.1e-07 60.1 306 21.2
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.2e-06 59.3 356 20.2
Lsat_1_v5_gn_4_144340 Lactuca sativa HOM05D003915 ORTHO05D005386 1.6e-06 58.9 132 30.3
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-06 58.9 291 20.6
Lj2g0003501 Lotus japonicus HOM05D002777 ORTHO05D001516 2.1e-06 58.5 359 21.7
Lj6g0021963 Lotus japonicus HOM05D002777 ORTHO05D001516 2.7e-06 58.2 344 21.2
TPR.G14641 Trifolium pratense HOM05D002777 ORTHO05D001516 2.7e-06 58.2 202 24.3
Lsat_1_v5_gn_6_82040 Lactuca sativa HOM05D003915 ORTHO05D001516 3.5e-06 57.8 307 21.8
Phvul.011G132400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.5e-06 57.8 311 21.2
Lsat_1_v5_gn_1_31001 Lactuca sativa HOM05D003915 ORTHO05D005386 4.6e-06 57.4 132 31.1
Lsat_1_v5_gn_4_128920 Lactuca sativa HOM05D003915 ORTHO05D005386 6.0e-06 57.0 187 28.3
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 7.8e-06 56.6 643 24.0
Lsat_1_v5_gn_6_75320 Lactuca sativa HOM05D003915 ORTHO05D005386 7.8e-06 56.6 147 29.9


User provided reference genes

Program Settings