Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 3.2e-173 611.7 313 100.0
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.1e-146 523.5 312 83.3
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 4.0e-144 515.0 301 83.4
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 4.8e-129 464.9 314 71.3
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 5.3e-128 461.5 314 71.7
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.5e-127 458.4 316 70.9
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 4.2e-125 451.8 314 71.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 5.5e-125 451.4 314 71.3
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.7e-124 449.1 314 70.1
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 7.9e-124 447.6 314 70.1
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.0e-123 445.7 312 72.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 6.7e-123 444.5 312 70.2
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.5e-122 443.4 315 67.6
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 3.3e-122 442.2 314 68.8
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.3e-122 442.2 315 67.9
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.4e-122 441.8 314 69.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 7.4e-122 441.0 313 69.3
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.3e-121 440.3 314 68.2
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.7e-121 439.9 312 67.3
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 2.2e-121 439.5 312 68.3
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 6.3e-121 438.0 313 68.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 8.2e-121 437.6 314 68.2
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.1e-120 437.2 314 68.2
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.4e-120 436.8 321 67.0
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.4e-120 436.8 312 68.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.8e-120 436.4 311 67.8
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.8e-120 436.4 312 67.6
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 3.1e-120 435.6 313 67.7
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.1e-120 435.6 312 68.3
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 7.0e-120 434.5 312 67.9
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 7.0e-120 434.5 314 68.2
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 9.1e-120 434.1 304 69.1
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.2e-119 433.7 312 67.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 2.6e-119 432.6 312 67.3
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 3.4e-119 432.2 312 67.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.4e-119 432.2 312 67.6
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.4e-119 432.2 313 67.7
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.0e-118 430.6 316 68.0
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 8.5e-118 427.6 303 68.3
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 8.5e-118 427.6 312 67.0
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.9e-117 426.4 319 65.2
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.9e-117 426.4 312 66.7
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.5e-117 426.0 311 66.6
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 3.2e-117 425.6 312 67.3
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.2e-117 425.6 313 67.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 5.5e-117 424.9 312 66.0
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 9.4e-117 424.1 312 66.3
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.2e-116 423.7 313 66.5
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.6e-116 423.3 303 68.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.7e-116 422.5 312 66.0
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 2.7e-116 422.5 312 66.0
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 2.7e-116 422.5 312 66.0
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 3.6e-116 422.2 314 65.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 4.7e-116 421.8 312 66.3
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 4.7e-116 421.8 312 66.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 6.1e-116 421.4 312 66.0
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 8.0e-116 421.0 313 65.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.4e-115 420.2 314 65.9
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 5.2e-115 418.3 314 65.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.6e-114 416.0 316 67.1
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.6e-114 416.0 293 72.4
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 5.7e-114 414.8 318 64.5
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.3e-113 413.7 315 65.1
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.8e-113 412.5 313 66.5
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 4.8e-113 411.8 356 59.6
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 1.8e-112 409.8 309 66.3
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 9.1e-112 407.5 313 64.5
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 9.1e-112 407.5 303 64.4
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.8e-110 402.1 306 64.4
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.5e-110 401.4 270 73.3
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.5e-109 400.2 306 64.4
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 7.2e-109 397.9 334 61.4
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.6e-108 396.7 307 64.5
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.7e-108 396.0 312 66.3
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 3.0e-107 392.5 309 62.1
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.7e-105 386.7 313 60.4
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 2.7e-103 379.4 314 58.6
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 6.5e-102 374.8 313 61.0
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 4.2e-101 372.1 268 68.7
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.1e-100 369.8 298 62.4
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.0e-100 367.9 310 61.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 3.7e-97 359.0 334 57.2
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.0e-94 350.9 313 57.5
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 2.5e-93 346.3 243 69.1
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.2e-92 344.0 268 65.7
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.2e-92 344.0 268 65.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.4e-90 335.5 321 49.8
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.7e-89 333.6 254 64.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.3e-86 323.9 313 53.7
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.8e-84 316.2 313 47.0
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 7.5e-82 308.1 206 72.8
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.4e-80 303.9 232 63.8
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.9e-80 303.5 311 47.3
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.1e-80 302.4 312 47.8
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 5.4e-80 302.0 256 60.9
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.2e-74 284.3 314 48.1
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 2.1e-71 273.5 191 68.6
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.7e-70 270.4 216 63.0
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.0e-70 269.6 306 43.5
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 5.2e-67 258.8 177 70.1
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.3e-65 254.2 268 48.5
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.7e-60 235.7 232 52.6
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.6e-55 220.7 304 38.5
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 3.5e-55 219.5 328 42.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.1e-47 193.7 148 63.5
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-37 161.4 127 58.3
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.5e-37 161.0 227 43.6
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 4.0e-35 152.9 128 56.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 5.1e-30 136.0 103 66.0
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 9.0e-27 125.2 244 34.4
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 5.5e-24 115.9 93 62.4
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 6.7e-22 109.0 212 33.5
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.5e-21 107.1 88 56.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 5.7e-21 105.9 70 72.9
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.2e-15 88.2 45 93.3
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 1.1e-08 65.1 43 74.4
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.5e-08 63.9 70 42.9


User provided reference genes

Program Settings