Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.3e-117 426.4 208 100.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 6.3e-93 344.4 208 84.1
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 4.5e-91 338.2 196 85.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.0e-83 312.8 204 76.0
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 3.5e-83 312.0 207 75.4
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.5e-81 305.8 181 79.0
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 3.2e-81 305.4 203 72.4
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 7.2e-81 304.3 206 73.3
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.6e-80 303.1 167 83.2
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.7e-80 302.4 203 74.9
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.7e-80 302.4 202 74.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 3.6e-80 302.0 198 75.3
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 8.0e-80 300.8 203 73.4
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.0e-79 300.4 199 74.4
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.0e-79 300.4 219 70.3
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.8e-79 299.7 202 73.8
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 2.3e-79 299.3 203 73.9
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.0e-79 298.5 203 72.9
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 8.8e-79 297.4 182 75.8
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.5e-78 296.6 208 70.7
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.5e-78 296.6 223 69.1
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.5e-78 296.6 194 74.7
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.6e-78 295.8 203 72.4
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 3.3e-78 295.4 194 72.7
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 3.3e-78 295.4 201 72.1
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 4.4e-78 295.0 206 70.4
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 7.5e-78 294.3 204 71.6
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.3e-77 293.5 202 71.8
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 1.3e-77 293.5 203 70.9
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 2.2e-77 292.7 199 70.9
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.8e-77 292.4 167 80.8
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 2.8e-77 292.4 167 80.8
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 2.8e-77 292.4 167 80.8
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 2.8e-77 292.4 167 80.8
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 2.8e-77 292.4 167 80.8
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 2.8e-77 292.4 170 78.2
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 3.7e-77 292.0 203 72.9
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 3.7e-77 292.0 186 72.0
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 4.8e-77 291.6 167 80.2
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 4.8e-77 291.6 166 80.1
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 4.8e-77 291.6 166 80.1
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 4.8e-77 291.6 204 70.6
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 6.3e-77 291.2 200 69.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 2.4e-76 289.3 222 68.0
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.4e-76 289.3 208 70.7
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 2.4e-76 289.3 168 80.4
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 7.0e-76 287.7 166 78.3
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 7.0e-76 287.7 202 72.3
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 9.1e-76 287.3 166 78.9
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 9.1e-76 287.3 167 79.6
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.2e-75 287.0 184 72.8
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.6e-75 286.6 166 78.9
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 2.0e-75 286.2 209 68.9
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.0e-75 286.2 203 69.5
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 3.5e-75 285.4 196 71.4
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 5.9e-75 284.6 229 64.6
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 7.7e-75 284.3 202 69.3
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.0e-74 283.9 180 73.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.7e-74 283.1 207 68.1
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.2e-74 282.7 207 68.6
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 3.8e-74 282.0 213 65.3
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 3.8e-74 282.0 202 69.3
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.0e-74 281.6 196 69.9
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 5.0e-74 281.6 175 76.6
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 5.0e-74 281.6 174 73.0
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 6.5e-74 281.2 210 67.6
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 6.5e-74 281.2 203 68.5
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.1e-73 280.4 197 68.5
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.1e-73 280.4 203 69.0
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.9e-73 279.6 183 73.2
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.2e-73 278.9 198 69.2
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.2e-72 276.9 153 83.0
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.6e-72 276.6 176 72.7
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 4.7e-72 275.0 220 64.5
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 8.0e-72 274.2 203 66.0
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.3e-71 272.7 202 68.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 5.2e-71 271.6 209 65.6
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 3.4e-70 268.9 203 66.5
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 3.7e-69 265.4 168 73.8
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 4.8e-69 265.0 200 64.0
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.1e-65 253.8 164 73.2
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 1.9e-65 253.1 166 69.9
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 3.3e-65 252.3 218 62.4
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 2.8e-64 249.2 167 75.4
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 4.4e-62 241.9 145 76.6
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 7.5e-62 241.1 145 76.6
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.7e-61 240.0 165 70.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.2e-61 239.6 141 77.3
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.2e-61 239.6 137 80.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 4.1e-60 235.3 144 75.7
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 7.0e-60 234.6 170 64.1
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.3e-58 230.3 181 65.7
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.0e-58 228.4 212 56.1
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 6.6e-58 228.0 163 63.8
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.3e-57 225.7 193 57.5
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 2.8e-56 222.6 161 68.3
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.1e-52 210.7 152 65.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.0e-50 204.1 111 84.7
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 3.4e-46 189.1 172 54.1
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.6e-40 170.2 192 49.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 8.4e-29 131.3 140 44.3
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.5e-17 93.2 165 38.2
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 2.9e-13 79.7 38 92.1
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 9.3e-12 74.7 133 36.1
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 6.9e-07 58.5 175 33.7
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 3.4e-06 56.2 132 31.1
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 3.4e-06 56.2 163 24.5
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 4.5e-06 55.8 138 31.9


User provided reference genes

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