Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.7e-268 929.1 599 100.0
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 5.9e-176 621.7 600 74.7
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 4.0e-148 529.3 597 67.2
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 2.0e-131 473.8 573 60.2
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.6e-128 464.2 584 54.3
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 4.6e-128 462.6 613 47.3
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 5.2e-124 449.1 587 53.5
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.6e-120 437.6 582 57.2
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 3.5e-120 436.4 578 55.9
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 3.9e-119 433.0 580 53.4
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 3.9e-119 433.0 579 54.1
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 9.5e-118 428.3 576 55.6
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 1.2e-117 427.9 578 58.0
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 3.6e-117 426.4 622 52.4
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 6.2e-117 425.6 577 49.4
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 3.1e-116 423.3 584 55.8
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 4.0e-116 422.9 578 54.2
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.2e-115 421.4 584 55.1
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.2e-115 421.4 606 49.0
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 2.0e-115 420.6 582 55.7
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 2.2e-114 417.2 609 51.6
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.9e-114 416.8 610 53.6
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 4.1e-113 412.9 581 53.0
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 4.1e-113 412.9 613 54.6
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 7.1e-113 412.1 552 56.0
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.2e-112 411.4 603 39.3
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.2e-112 411.4 608 46.9
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 1.0e-111 408.3 579 55.4
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.3e-111 407.1 581 54.6
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 5.1e-111 406.0 597 56.1
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 8.6e-111 405.2 580 51.9
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.9e-110 404.1 581 49.7
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 4.3e-110 402.9 590 50.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.1e-108 398.3 579 55.8
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.2e-107 394.8 588 53.9
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 2.6e-107 393.7 612 52.1
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 2.6e-107 393.7 590 52.4
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 2.6e-107 393.7 579 54.9
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 7.6e-107 392.1 589 54.3
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.7e-106 391.0 598 39.0
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.2e-106 390.6 613 41.6
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 4.2e-105 386.3 579 49.4
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.5e-104 383.3 598 47.8
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 6.0e-104 382.5 584 46.1
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.3e-103 380.6 604 42.2
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.9e-102 377.5 585 53.2
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 7.3e-102 375.6 575 51.5
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.6e-101 374.4 609 43.7
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.8e-100 370.9 579 49.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 5.3e-100 369.4 588 43.2
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.5e-99 367.9 579 49.2
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.6e-99 367.1 595 51.6
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 3.4e-99 366.7 580 43.1
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 2.3e-95 354.0 586 52.9
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.1e-94 351.7 595 49.2
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 9.6e-94 348.6 522 52.5
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 1.1e-92 345.1 595 46.4
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.8e-92 344.4 520 49.6
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.0e-92 343.2 547 51.4
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 5.3e-92 342.8 596 48.8
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 5.3e-92 342.8 596 48.8
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 5.3e-92 342.8 610 42.6
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 9.0e-92 342.0 580 50.9
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 2.2e-90 337.4 579 48.2
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 4.9e-90 336.3 356 56.2
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 4.9e-90 336.3 594 49.8
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 4.6e-88 329.7 581 51.3
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 5.1e-87 326.2 576 49.7
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 4.3e-86 323.2 502 51.6
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 9.6e-86 322.0 586 50.5
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 1.6e-85 321.2 591 49.4
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 2.1e-85 320.9 476 54.2
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.8e-85 319.7 597 46.2
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.8e-85 319.7 597 46.2
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 8.1e-85 318.9 501 54.5
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 8.1e-85 318.9 515 54.4
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 5.8e-83 312.8 597 45.9
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 7.1e-81 305.8 589 49.2
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 4.6e-80 303.1 585 48.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 5.1e-79 299.7 586 48.1
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 2.1e-77 294.3 548 42.7
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.0e-74 283.1 397 46.6
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.4e-73 281.6 615 40.0
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 4.6e-72 276.6 577 39.3
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 4.3e-70 270.0 588 48.0
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 9.7e-70 268.9 599 44.6
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 9.0e-68 262.3 601 47.1
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 7.7e-67 259.2 545 50.3
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 2.5e-65 254.2 369 52.8
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 2.5e-65 254.2 593 36.6
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 2.5e-65 254.2 593 36.6
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 7.9e-64 249.2 591 45.5
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.4e-63 248.4 587 45.3
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 2.0e-62 244.6 585 39.0
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 2.5e-62 244.2 588 38.3
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 9.7e-62 242.3 582 44.7
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 3.7e-61 240.4 519 44.9
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 8.2e-61 239.2 591 44.3
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 3.1e-60 237.3 606 27.7
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.0e-58 232.3 473 48.4
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 5.0e-58 229.9 587 46.7
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 3.7e-53 213.8 536 43.1
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 7.0e-52 209.5 510 38.8
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 2.7e-27 127.9 156 44.9
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.3e-25 120.6 158 46.8
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 5.6e-25 120.2 316 26.6
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 3.0e-23 114.4 216 44.0
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 8.3e-21 106.3 225 33.8
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.9e-12 78.6 207 54.1
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 2.0e-11 75.1 176 31.2
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 4.6e-11 73.9 64 67.2
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 4.3e-09 67.4 196 28.1
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 4.3e-09 67.4 54 59.3
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 7.3e-09 66.6 90 40.0
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 1.2e-08 65.9 54 57.4


User provided reference genes

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