Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G0087 Erigeron canadensis HOM05D002846 ORTHO05D002692 3.4e-107 391.7 203 100.0
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 6.2e-53 211.5 168 67.9
Lsat_1_v5_gn_8_128540 Lactuca sativa HOM05D002846 ORTHO05D002692 2.4e-41 172.9 187 55.1
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 1.2e-19 100.9 179 43.0
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.2e-17 92.8 173 42.8
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.0e-15 86.3 160 40.6
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 6.7e-15 85.1 160 38.8
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 9.7e-14 81.3 169 39.1
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 9.7e-14 81.3 170 39.4
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.8e-13 79.7 158 38.0
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 4.8e-13 79.0 155 38.1
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 6.3e-13 78.6 184 34.8
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 1.4e-12 77.4 178 38.2
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 3.1e-12 76.3 162 40.7
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 4.1e-12 75.9 158 34.8
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 4.1e-12 75.9 157 37.6
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 6.9e-12 75.1 173 37.0
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 6.9e-12 75.1 161 38.5
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 9.1e-12 74.7 150 38.7
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 9.1e-12 74.7 150 39.3
Lalb_Chr24g0393141 Lupinus albus HOM05D002846 ORTHO05D002692 9.1e-12 74.7 114 43.9
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 1.2e-11 74.3 169 38.5
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.2e-11 74.3 158 38.0
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 1.5e-11 73.9 158 39.2
EL10Ac9g20666 Beta vulgaris HOM05D002846 ORTHO05D002692 2.0e-11 73.6 156 36.5
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.6e-11 73.2 137 38.7
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 3.4e-11 72.8 155 40.6
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 3.4e-11 72.8 158 38.6
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 4.5e-11 72.4 174 36.8
CANSAT64G1541 Cannabis sativa HOM05D002846 ORTHO05D002692 1.3e-10 70.9 178 33.7
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 1.3e-10 70.9 168 36.9
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 1.3e-10 70.9 169 39.1
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.9e-10 69.7 165 37.0
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 2.9e-10 69.7 170 40.0
AUR62025052 Chenopodium quinoa HOM05D002846 ORTHO05D002692 3.8e-10 69.3 121 42.1
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 3.8e-10 69.3 171 35.1
MSTRG.14152 Avicennia marina HOM05D002846 ORTHO05D002692 5.0e-10 68.9 146 40.4
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 5.0e-10 68.9 164 37.8
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 5.0e-10 68.9 164 36.0
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 5.0e-10 68.9 168 36.3
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 5.0e-10 68.9 155 38.1
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 6.5e-10 68.6 136 38.2
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 6.5e-10 68.6 166 33.7
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 8.5e-10 68.2 170 35.9
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.1e-09 67.8 171 38.0
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 1.9e-09 67.0 167 38.3
Dinv02736 Davidia involucrata HOM05D002846 ORTHO05D002692 1.9e-09 67.0 119 44.5
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 1.9e-09 67.0 115 40.0
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 1.9e-09 67.0 180 36.1
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 2.5e-09 66.6 155 40.6
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 2.5e-09 66.6 183 39.9
Actinidia09707 Actinidia chinensis HOM05D002846 ORTHO05D002692 3.2e-09 66.2 162 40.1
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 3.2e-09 66.2 154 36.4
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 4.2e-09 65.9 136 35.3
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 4.2e-09 65.9 175 36.0
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 5.5e-09 65.5 151 37.1
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 5.5e-09 65.5 133 36.8
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 7.2e-09 65.1 166 35.5
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 7.2e-09 65.1 142 36.6
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 7.2e-09 65.1 144 35.4
Sopen07g026090 Solanum pennellii HOM05D002846 ORTHO05D002692 7.2e-09 65.1 121 38.0
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 9.4e-09 64.7 177 34.5
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 9.4e-09 64.7 152 32.2
Lj1A758T10 Lonicera japonica HOM05D002846 ORTHO05D002692 9.4e-09 64.7 112 42.0
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 9.4e-09 64.7 121 40.5
CiPaw.03G161600 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.2e-08 64.3 128 39.8
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 1.2e-08 64.3 124 42.7
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.2e-08 64.3 165 34.5
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 1.6e-08 63.9 129 37.2
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.6e-08 63.9 165 33.9
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 2.1e-08 63.5 157 37.6
PGR042G0859 Punica granatum HOM05D002846 ORTHO05D002692 2.1e-08 63.5 143 39.2
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.1e-08 63.5 158 36.7
DCAR_021181 Daucus carota HOM05D002846 ORTHO05D002692 2.7e-08 63.2 108 41.7
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.7e-08 63.2 157 37.6
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 3.6e-08 62.8 163 37.4
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 3.6e-08 62.8 176 33.5
MD17G1094800 Malus domestica HOM05D002846 ORTHO05D002692 4.7e-08 62.4 118 41.5
SalBow1G8286 Salvia bowleyana HOM05D002846 ORTHO05D002692 4.7e-08 62.4 148 35.8
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 6.1e-08 62.0 165 32.7
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 6.1e-08 62.0 111 38.7
Glyma.13G308000 Glycine max HOM05D002846 ORTHO05D002692 6.1e-08 62.0 95 46.3
Hund01143 Selenicereus undatus HOM05D002846 ORTHO05D002692 6.1e-08 62.0 142 34.5
Sc12g0002340 Simmondsia chinensis HOM05D002846 ORTHO05D002692 6.1e-08 62.0 133 33.8
Rhsim06G0159700 Rhododendron simsii HOM05D002846 ORTHO05D002692 7.9e-08 61.6 117 38.5
Sc01g0004150 Simmondsia chinensis HOM05D002846 ORTHO05D002692 1.0e-07 61.2 99 39.4
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 1.0e-07 61.2 112 40.2
HPP92_004138 Vanilla planifolia HOM05D002846 ORTHO05D002692 1.0e-07 61.2 94 42.6
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 1.8e-07 60.5 158 34.8
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.8e-07 60.5 138 36.2
MBI02_g23957_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 2.3e-07 60.1 170 35.3
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 3.0e-07 59.7 152 35.5
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 3.9e-07 59.3 105 39.0
PSO210G5289 Papaver somniferum HOM05D002846 ORTHO05D002692 3.9e-07 59.3 161 32.3
BcaC01g03489 Brassica carinata HOM05D002846 ORTHO05D002692 5.1e-07 58.9 162 32.1
BolC3t17475H Brassica oleracea HOM05D002846 ORTHO05D002692 5.1e-07 58.9 162 32.1
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 5.1e-07 58.9 154 35.7
MBI18_g03004_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 5.1e-07 58.9 125 40.8
Solyc07g052460.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 5.1e-07 58.9 125 36.8
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 5.1e-07 58.9 161 33.5
AT3G21710 Arabidopsis thaliana HOM05D002846 ORTHO05D002692 6.7e-07 58.5 92 42.4
Ciclev10009727m.g Citrus clementina HOM05D002846 ORTHO05D002692 6.7e-07 58.5 119 32.8
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 1.1e-06 57.8 159 34.0
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.1e-06 57.8 152 32.9
CARHR097660 Cardamine hirsuta HOM05D002846 ORTHO05D002692 1.5e-06 57.4 164 34.8
Eucgr.A01716 Eucalyptus grandis HOM05D002846 ORTHO05D002692 1.5e-06 57.4 161 34.2
Nn1g03606 Nelumbo nucifera HOM05D002846 ORTHO05D002692 1.5e-06 57.4 129 34.9
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 1.5e-06 57.4 163 35.0
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 2.6e-06 56.6 126 36.5
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.3e-06 56.2 160 35.0
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 3.3e-06 56.2 160 35.0
BcaC05g28139 Brassica carinata HOM05D002846 ORTHO05D002692 4.4e-06 55.8 110 36.4
Thhalv10021505m.g Eutrema salsugineum HOM05D002846 ORTHO05D002692 4.4e-06 55.8 91 40.7
Oeu027251.1 Olea europaea HOM05D002846 ORTHO05D002692 4.4e-06 55.8 153 33.3
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 4.4e-06 55.8 150 34.0
C05p41700 Brassica napus HOM05D002846 ORTHO05D002692 5.7e-06 55.5 154 32.5
BolC5t32905H Brassica oleracea HOM05D002846 ORTHO05D002692 5.7e-06 55.5 154 32.5
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 5.7e-06 55.5 144 31.9
MSTRG.12286 Avicennia marina HOM05D002846 ORTHO05D002692 7.4e-06 55.1 154 36.4
A03p42420 Brassica napus HOM05D002846 ORTHO05D002692 7.4e-06 55.1 162 31.5
C03p51900 Brassica napus HOM05D002846 ORTHO05D002692 7.4e-06 55.1 162 31.5
BraA03t13394Z Brassica rapa HOM05D002846 ORTHO05D002692 7.4e-06 55.1 162 31.5
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 7.4e-06 55.1 124 34.7
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 7.4e-06 55.1 150 35.3
AL3G35830 Arabidopsis lyrata HOM05D002846 ORTHO05D002692 9.7e-06 54.7 92 40.2
EL10Ac4g07933 Beta vulgaris HOM05D019198 ORTHO05D002692 9.7e-06 54.7 100 36.0
BcaB04g19182 Brassica carinata HOM05D002846 ORTHO05D002692 9.7e-06 54.7 162 30.9
ClCG02G001830 Citrullus lanatus HOM05D002846 ORTHO05D002692 9.7e-06 54.7 86 36.0
Oeu036754.1 Olea europaea HOM05D002846 ORTHO05D002692 9.7e-06 54.7 95 41.1
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 9.7e-06 54.7 150 34.7
Sopen05g027000 Solanum pennellii HOM05D002846 ORTHO05D002692 9.7e-06 54.7 119 37.0


User provided reference genes

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