Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 6.8e-112 407.5 234 100.0
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 4.1e-56 222.2 220 62.7
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 1.3e-46 190.7 218 57.8
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 1.3e-41 174.1 230 47.0
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 2.4e-40 169.9 214 48.1
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 6.9e-40 168.3 238 47.5
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 2.0e-39 166.8 235 47.2
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 5.0e-38 162.2 217 48.8
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 6.5e-38 161.8 212 48.6
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 2.1e-36 156.8 212 47.6
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 3.6e-36 156.0 230 42.6
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.7e-36 155.6 223 47.1
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 7.9e-36 154.8 239 44.4
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 1.0e-35 154.5 225 46.2
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 1.0e-35 154.5 215 44.2
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 3.9e-35 152.5 222 45.5
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 3.9e-35 152.5 226 44.7
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 3.9e-35 152.5 217 46.1
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 6.7e-35 151.8 212 47.6
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 8.8e-35 151.4 210 46.2
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 1.1e-34 151.0 232 44.8
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 1.5e-34 150.6 220 44.5
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 3.3e-34 149.4 224 42.9
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 5.7e-34 148.7 215 44.7
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 5.7e-34 148.7 228 44.7
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 5.7e-34 148.7 232 45.3
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 9.7e-34 147.9 218 45.0
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 9.7e-34 147.9 229 44.5
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 1.3e-33 147.5 228 44.7
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 1.7e-33 147.1 203 47.3
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.7e-33 147.1 230 44.3
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 2.2e-33 146.7 224 45.1
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 2.8e-33 146.4 223 43.9
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 3.7e-33 146.0 225 46.2
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 3.7e-33 146.0 210 46.7
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.8e-33 145.6 222 43.7
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 4.8e-33 145.6 219 44.7
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 4.8e-33 145.6 231 41.6
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 4.8e-33 145.6 229 45.0
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 6.3e-33 145.2 219 40.6
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 8.2e-33 144.8 232 42.2
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 8.2e-33 144.8 210 44.3
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 1.4e-32 144.1 221 44.3
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 1.4e-32 144.1 210 44.3
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 1.4e-32 144.1 223 42.6
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 1.8e-32 143.7 210 45.2
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 4.1e-32 142.5 216 44.0
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 4.1e-32 142.5 216 44.0
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 9.1e-32 141.4 212 43.4
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 1.2e-31 141.0 254 40.6
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 1.6e-31 140.6 215 45.6
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 2.0e-31 140.2 208 43.8
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 2.6e-31 139.8 216 44.4
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 1.3e-30 137.5 204 42.2
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 1.7e-30 137.1 213 43.7
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 1.7e-30 137.1 212 42.0
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 1.7e-30 137.1 234 39.7
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 1.7e-30 137.1 212 43.4
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 2.9e-30 136.3 237 41.8
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 5.0e-30 135.6 212 43.9
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 5.0e-30 135.6 212 43.9
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 6.5e-30 135.2 238 39.9
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 8.5e-30 134.8 213 40.8
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 8.5e-30 134.8 209 44.5
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 8.5e-30 134.8 245 42.0
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 1.9e-29 133.7 216 44.4
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 2.5e-29 133.3 225 40.0
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 2.5e-29 133.3 261 38.3
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 2.5e-29 133.3 230 41.7
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 4.2e-29 132.5 209 44.0
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 5.5e-29 132.1 222 43.2
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 5.5e-29 132.1 210 43.3
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 9.4e-29 131.3 230 41.7
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 9.4e-29 131.3 214 43.5
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 1.2e-28 131.0 208 42.8
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.6e-28 130.6 219 42.9
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.1e-28 130.2 219 42.5
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 2.7e-28 129.8 222 41.4
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 2.7e-28 129.8 212 41.5
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 2.7e-28 129.8 219 41.6
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 3.6e-28 129.4 232 39.2
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 6.1e-28 128.6 225 41.8
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 8.0e-28 128.3 228 41.2
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 1.4e-27 127.5 226 40.3
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 1.4e-27 127.5 212 41.5
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 1.4e-27 127.5 218 39.0
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 1.4e-27 127.5 206 42.2
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 1.8e-27 127.1 204 42.6
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 1.8e-27 127.1 204 42.6
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 2.3e-27 126.7 222 41.4
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 2.3e-27 126.7 208 43.8
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 3.0e-27 126.3 188 47.9
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 5.2e-27 125.6 211 43.1
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 6.7e-27 125.2 225 40.9
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 1.5e-26 124.0 206 41.3
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 1.5e-26 124.0 206 42.2
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 1.5e-26 124.0 187 44.4
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 2.6e-26 123.2 227 38.3
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 4.4e-26 122.5 221 39.4
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 5.7e-26 122.1 224 37.9
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 7.5e-26 121.7 222 37.8
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 7.5e-26 121.7 222 42.8
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 1.7e-25 120.6 212 44.8
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 1.8e-24 117.1 209 43.1
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 5.3e-24 115.5 185 42.7
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 2.7e-23 113.2 214 38.8
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 5.9e-23 112.1 181 44.2
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 1.7e-22 110.5 212 39.6
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 4.2e-21 105.9 281 34.5
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 6.3e-17 92.0 147 40.1
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 1.1e-16 91.3 306 31.4
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 2.0e-15 87.0 112 47.3
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 6.5e-14 82.0 112 43.8
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 1.5e-13 80.9 179 36.3
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 7.2e-13 78.6 197 33.5
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 2.1e-12 77.0 120 41.7
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 1.4e-11 74.3 59 62.7
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 7.5e-10 68.6 229 32.3
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 8.3e-09 65.1 130 36.9
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.4e-08 64.3 136 37.5
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 4.1e-08 62.8 103 40.8
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 4.5e-07 59.3 85 44.7


User provided reference genes

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