Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.1e-68 263.5 163 100.0
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 5.0e-53 211.5 167 80.8
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 9.7e-49 197.2 163 79.8
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 8.8e-42 174.1 171 70.8
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 5.7e-41 171.4 170 70.0
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.3e-40 170.2 162 68.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 3.7e-40 168.7 166 67.5
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 4.8e-40 168.3 169 68.6
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.3e-40 167.9 165 67.9
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 8.3e-40 167.5 168 67.3
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 1.1e-39 167.2 165 67.9
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.4e-39 166.8 132 76.5
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.8e-39 166.4 165 67.9
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 3.1e-39 165.6 163 68.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 9.1e-39 164.1 153 68.6
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.2e-38 163.7 172 68.6
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.2e-38 163.7 127 79.5
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.2e-38 163.7 161 67.1
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 1.2e-38 163.7 166 66.3
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.2e-38 163.7 162 67.9
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.6e-38 163.3 118 81.4
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 1.6e-38 163.3 165 68.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 2.7e-38 162.5 114 85.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.7e-38 162.5 163 66.3
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 4.5e-38 161.8 154 68.8
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 4.5e-38 161.8 168 67.3
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 4.5e-38 161.8 167 65.9
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 7.7e-38 161.0 118 80.5
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 7.7e-38 161.0 119 78.2
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.0e-37 160.6 155 67.7
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-37 160.2 166 65.7
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.7e-37 159.8 157 66.9
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.7e-37 159.8 161 65.2
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 2.2e-37 159.5 172 66.3
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.2e-37 159.5 176 65.9
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 2.9e-37 159.1 166 66.3
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 2.9e-37 159.1 163 67.5
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 2.9e-37 159.1 165 63.0
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.9e-37 159.1 164 65.2
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 2.9e-37 159.1 132 72.7
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 3.8e-37 158.7 163 65.0
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 3.8e-37 158.7 161 65.2
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 3.8e-37 158.7 165 64.8
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 5.0e-37 158.3 118 78.8
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 5.0e-37 158.3 161 66.5
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 6.5e-37 157.9 163 66.9
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.5e-37 157.9 175 65.1
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 6.5e-37 157.9 161 68.3
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 8.5e-37 157.5 155 67.1
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 8.5e-37 157.5 118 78.0
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 1.1e-36 157.1 163 65.6
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.1e-36 157.1 161 65.2
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.1e-36 157.1 118 78.0
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.5e-36 156.8 165 64.8
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.5e-36 156.8 166 64.5
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.5e-36 156.8 165 63.0
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.9e-36 156.4 161 65.8
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.5e-36 156.0 167 62.9
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.2e-36 155.6 105 90.5
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 4.2e-36 155.2 165 63.6
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 4.2e-36 155.2 161 64.6
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 7.2e-36 154.5 154 66.2
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 9.4e-36 154.1 157 68.2
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.6e-35 153.3 161 64.6
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 2.7e-35 152.5 134 72.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.4e-34 150.2 157 66.2
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.4e-34 150.2 162 61.7
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 1.8e-34 149.8 158 63.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 3.0e-34 149.1 113 79.6
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 3.0e-34 149.1 112 79.5
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 3.0e-34 149.1 163 61.3
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 4.0e-34 148.7 159 62.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 8.8e-34 147.5 159 63.5
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 8.8e-34 147.5 159 63.5
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.2e-33 147.1 159 63.5
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.2e-33 147.1 159 63.5
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.6e-33 146.0 105 84.8
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 2.6e-33 146.0 163 58.9
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 3.4e-33 145.6 156 65.4
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.4e-33 145.2 118 74.6
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 5.7e-33 144.8 123 68.3
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 7.5e-33 144.4 156 63.5
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 9.8e-33 144.1 111 77.5
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 9.8e-33 144.1 156 63.5
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 9.8e-33 144.1 156 63.5
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.4e-31 140.2 111 73.9
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.4e-31 139.4 154 59.1
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.1e-31 139.0 150 58.0
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 7.0e-31 137.9 196 43.9
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.2e-30 137.1 113 69.9
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 5.9e-30 134.8 173 56.1
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 7.7e-30 134.4 111 72.1
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 3.6e-27 125.6 122 64.8
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 4.9e-24 115.2 103 58.3
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.2e-23 112.5 118 66.9
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 5.4e-23 111.7 176 46.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 5.9e-22 108.2 114 52.6
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.6e-19 100.1 133 48.1
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.8e-19 99.4 157 43.3
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.7e-19 98.6 106 54.7
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.1e-18 95.9 201 37.3
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.9e-16 88.6 97 53.6
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 4.1e-15 85.5 114 44.7
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 8.0e-11 71.2 101 45.5
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 2.3e-10 69.7 60 60.0
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 2.6e-09 66.2 60 55.0
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 9.8e-09 64.3 96 41.7
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.3e-08 63.9 107 44.9


User provided reference genes

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