Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 3.6e-43 177.9 96 100.0
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 5.2e-26 120.9 94 71.3
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 2.1e-19 99.0 91 62.6
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 3.1e-18 95.1 93 63.4
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 8.9e-18 93.6 91 60.4
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 8.9e-18 93.6 91 60.4
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.5e-17 92.8 102 56.9
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.5e-17 92.8 91 60.4
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.0e-17 92.4 92 62.0
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 2.6e-17 92.0 91 59.3
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 5.8e-17 90.9 93 60.2
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 5.8e-17 90.9 93 60.2
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 7.6e-17 90.5 91 58.2
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 9.9e-17 90.1 89 55.1
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.9e-16 88.6 86 61.6
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 6.4e-16 87.4 91 54.9
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 6.4e-16 87.4 91 57.1
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 8.3e-16 87.0 95 55.8
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 8.3e-16 87.0 93 57.0
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 8.3e-16 87.0 91 56.0
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 8.3e-16 87.0 100 49.0
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 1.1e-15 86.7 102 54.9
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.1e-15 86.7 91 53.8
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.1e-15 86.7 101 52.5
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 1.4e-15 86.3 92 58.7
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.4e-15 85.5 92 57.6
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 2.4e-15 85.5 87 56.3
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.4e-15 85.5 91 56.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.2e-15 85.1 91 58.2
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 4.1e-15 84.7 91 54.9
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 4.1e-15 84.7 92 54.3
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 4.1e-15 84.7 95 55.8
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 4.1e-15 84.7 96 51.0
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.4e-15 84.3 90 55.6
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.4e-15 84.3 90 55.6
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 5.4e-15 84.3 86 55.8
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 7.1e-15 84.0 91 54.9
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 9.2e-15 83.6 90 54.4
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.2e-15 83.6 90 54.4
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 9.2e-15 83.6 89 53.9
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.6e-14 82.8 91 57.1
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.6e-14 82.8 95 55.8
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.6e-14 82.8 91 53.8
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 2.1e-14 82.4 93 55.9
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 7.8e-14 80.5 90 53.3
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 1.0e-13 80.1 92 54.3
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.3e-13 79.7 91 52.7
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.7e-13 79.3 93 53.8
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.7e-13 79.3 93 53.8
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.7e-13 79.3 93 53.8
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 2.3e-13 79.0 89 57.3
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 3.0e-13 78.6 91 51.6
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 3.0e-13 78.6 99 50.5
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 3.0e-13 78.6 95 52.6
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 3.9e-13 78.2 92 53.3
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 5.1e-13 77.8 89 52.8
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.9e-12 75.9 99 52.5
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 2.5e-12 75.5 69 60.9
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 3.3e-12 75.1 69 63.8
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 3.3e-12 75.1 89 46.1
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 5.6e-12 74.3 94 48.9
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 5.6e-12 74.3 91 47.3
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 9.6e-12 73.6 89 53.9
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 1.2e-11 73.2 57 70.2
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 6.2e-11 70.9 93 48.4
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 6.2e-11 70.9 92 54.3
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.4e-10 69.7 83 53.0
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 6.8e-10 67.4 84 48.8
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.2e-09 66.6 95 46.3
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 3.4e-09 65.1 92 47.8
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 9.9e-09 63.5 64 56.2
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 2.9e-08 62.0 85 48.2
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 1.1e-07 60.1 83 49.4
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.1e-07 60.1 87 47.1
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 3.2e-07 58.5 85 47.1
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.2e-06 56.6 50 62.0
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 3.5e-06 55.1 95 41.1


User provided reference genes

Program Settings