Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4802 Erigeron canadensis HOM05D003167 ORTHO05D003929 1.7e-122 443.0 273 100.0
Lsat_1_v5_gn_2_23140 Lactuca sativa HOM05D003167 ORTHO05D003929 2.4e-92 342.8 212 82.1
ECA238G2918 Erigeron canadensis HOM05D003167 ORTHO05D003929 7.7e-91 337.8 211 83.9
DCAR_020795 Daucus carota HOM05D003167 ORTHO05D003929 1.6e-88 330.1 210 79.0
Cc00_g14960 Coffea canephora HOM05D003167 ORTHO05D003929 4.7e-88 328.6 210 79.0
Dinv35839 Davidia involucrata HOM05D003167 ORTHO05D003929 2.3e-87 326.2 212 78.3
Thecc.05G076300 Theobroma cacao HOM05D003167 ORTHO05D003929 5.2e-87 325.1 212 78.3
CiPaw.10G002600 Carya illinoinensis HOM05D003167 ORTHO05D003929 2.0e-86 323.2 212 78.8
MSTRG.21603 Avicennia marina HOM05D003167 ORTHO05D003929 2.6e-86 322.8 209 78.0
Gohir.D04G106400 Gossypium hirsutum HOM05D003167 ORTHO05D003929 2.6e-86 322.8 212 78.3
Gorai.009G410400 Gossypium raimondii HOM05D003167 ORTHO05D003929 2.6e-86 322.8 212 78.3
HanXRQChr11g0325191 Helianthus annuus HOM05D003167 ORTHO05D003929 4.4e-86 322.0 209 79.9
Manes.08G017200 Manihot esculenta HOM05D003167 ORTHO05D003929 4.4e-86 322.0 212 76.4
TAR623G0013 Trochodendron aralioides HOM05D003167 ORTHO05D003929 4.4e-86 322.0 210 79.5
CSS0014862 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 5.7e-86 321.6 212 77.4
CSS0043785 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 5.7e-86 321.6 212 77.4
GSVIVG01033725001 Vitis vinifera HOM05D003167 ORTHO05D003929 7.5e-86 321.2 212 77.8
Duzib093G1992 Durio zibethinus HOM05D003167 ORTHO05D003929 9.8e-86 320.9 210 78.1
Cfa016494 Carpinus fangiana HOM05D003167 ORTHO05D003929 2.2e-85 319.7 212 77.4
Gohir.A04G067800 Gossypium hirsutum HOM05D003167 ORTHO05D003929 2.2e-85 319.7 212 77.8
RcHm_v2.0_Chr3g0471451 Rosa chinensis HOM05D003167 ORTHO05D003929 3.7e-85 318.9 212 76.4
FAN02G2003 Fragaria x ananassa HOM05D003167 ORTHO05D003929 6.3e-85 318.2 212 76.4
ClCG10G019590 Citrullus lanatus HOM05D003167 ORTHO05D003929 1.1e-84 317.4 212 76.9
FvH4_6g17312 Fragaria vesca HOM05D003167 ORTHO05D003929 1.4e-84 317.0 212 75.9
FAN14G2907 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.4e-84 317.0 212 75.9
Lj3C1008T14 Lonicera japonica HOM05D003167 ORTHO05D003929 1.4e-84 317.0 232 73.3
Actinidia26630 Actinidia chinensis HOM05D003167 ORTHO05D003929 3.1e-84 315.8 212 75.5
Haze_19497 Corylus avellana HOM05D003167 ORTHO05D003929 5.4e-84 315.1 212 75.9
Ca_08942_v3 Cicer arietinum L. HOM05D003167 ORTHO05D003929 7.0e-84 314.7 212 75.0
unitig_578.g16659 Utricularia gibba HOM05D003167 ORTHO05D003929 7.0e-84 314.7 206 77.2
Lj1g0005916 Lotus japonicus HOM05D003167 ORTHO05D003929 9.1e-84 314.3 212 74.1
arahy.Tifrunner.gnm1.ann1.P92TZX Arachis hypogaea HOM05D003167 ORTHO05D003929 1.2e-83 313.9 212 75.9
arahy.Tifrunner.gnm1.ann1.WY8M22 Arachis hypogaea HOM05D003167 ORTHO05D003929 1.2e-83 313.9 212 75.9
Sed0027110 Sechium edule HOM05D003167 ORTHO05D003929 2.0e-83 313.2 210 76.2
SGA_v2.0_scaffold312G48279 Striga asiatica HOM05D003167 ORTHO05D003929 2.0e-83 313.2 207 77.3
Peaxi162Scf00732g00028 Petunia axillaris HOM05D003167 ORTHO05D003929 2.7e-83 312.8 210 75.2
CANSAT80G1311 Cannabis sativa HOM05D003167 ORTHO05D003929 1.0e-82 310.8 212 73.6
Hma1.2p1_0564F.1_g179130 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.0e-82 310.8 212 75.9
Medtr7g102700 Medicago truncatula HOM05D003167 ORTHO05D003929 1.7e-82 310.1 209 75.1
CsaV3_3G036590 Cucumis sativus L. HOM05D003167 ORTHO05D003929 5.0e-82 308.5 204 77.9
MELO3C009413.2 Cucumis melo HOM05D003167 ORTHO05D003929 6.6e-82 308.1 218 73.4
Migut.G00710 Erythranthe guttata HOM05D003167 ORTHO05D003929 8.6e-82 307.8 210 75.2
Phvul.001G184000 Phaseolus vulgaris HOM05D003167 ORTHO05D003929 8.6e-82 307.8 212 74.1
Atru.chr8.1695 Acer truncatum HOM05D003167 ORTHO05D003929 1.9e-81 306.6 212 73.6
vmacro07353 Vaccinium macrocarpon HOM05D003167 ORTHO05D003929 2.5e-81 306.2 212 73.6
ATR0724G050 Amborella trichopoda HOM05D003167 ORTHO05D003929 3.3e-81 305.8 217 74.2
VMungo1383G0302 Vigna mungo HOM05D003167 ORTHO05D003929 3.3e-81 305.8 212 73.1
Aqoxy1G01021 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 7.2e-81 304.7 212 72.6
Rhsim03G0085500 Rhododendron simsii HOM05D003167 ORTHO05D003929 7.2e-81 304.7 224 72.8
TAR636G1269 Trochodendron aralioides HOM05D003167 ORTHO05D003929 7.2e-81 304.7 212 72.2
THA.LOC104816364 Tarenaya hassleriana HOM05D003167 ORTHO05D003929 9.5e-81 304.3 212 74.5
FAN05G3544 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.6e-80 303.5 230 69.6
FAN05G3981 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.6e-80 303.5 230 69.6
Lalb_Chr25g0288761 Lupinus albus HOM05D003167 ORTHO05D003929 2.1e-80 303.1 211 72.5
PSO339G0841 Papaver somniferum HOM05D003167 ORTHO05D003929 3.6e-80 302.4 213 72.3
Sabra06G0093300 Salix brachista HOM05D003167 ORTHO05D003929 3.6e-80 302.4 238 67.2
TPR.G31678 Trifolium pratense HOM05D003167 ORTHO05D003929 3.6e-80 302.4 209 73.2
Ah.15g091330 Amaranthus hybridus HOM05D003167 ORTHO05D003929 6.1e-80 301.6 206 73.8
Cc00_g14970 Coffea canephora HOM05D003167 ORTHO05D003929 8.0e-80 301.2 252 64.7
Eucgr.K02416 Eucalyptus grandis HOM05D003167 ORTHO05D003929 8.0e-80 301.2 212 74.1
COL.COLO4_22264 Corchorus olitorius HOM05D003167 ORTHO05D003929 1.0e-79 300.8 209 73.7
EL10Ac7g16722 Beta vulgaris HOM05D003167 ORTHO05D003929 1.8e-79 300.1 210 71.9
Aa31LG1G9100 Aethionema arabicum HOM05D003167 ORTHO05D003929 5.2e-79 298.5 209 72.2
Medtr1g061860 Medicago truncatula HOM05D003167 ORTHO05D003929 5.2e-79 298.5 212 72.6
Potri.006G118700 Populus trichocarpa HOM05D003167 ORTHO05D003929 6.8e-79 298.1 188 79.3
Lalb_Chr21g0315291 Lupinus albus HOM05D003167 ORTHO05D003929 8.9e-79 297.7 212 70.8
Ciclev10011207m.g Citrus clementina HOM05D003167 ORTHO05D003929 1.5e-78 297.0 212 71.7
AUR62042696 Chenopodium quinoa HOM05D003167 ORTHO05D003929 2.0e-78 296.6 207 72.5
CDE04G1328 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 3.4e-78 295.8 212 70.8
VMungo0720G2588 Vigna mungo HOM05D003167 ORTHO05D003929 7.5e-78 294.7 212 71.7
AUR62040188 Chenopodium quinoa HOM05D003167 ORTHO05D003929 9.8e-78 294.3 207 71.5
Solyc10g085410.3 Solanum lycopersicum HOM05D003167 ORTHO05D003929 6.3e-77 291.6 209 70.8
BolC8t52784H Brassica oleracea HOM05D003167 ORTHO05D003929 1.1e-76 290.8 205 72.2
Glyma.03G188600 Glycine max HOM05D003167 ORTHO05D003929 1.1e-76 290.8 209 70.3
C05p02250 Brassica napus HOM05D003167 ORTHO05D003929 1.4e-76 290.4 208 70.7
Aqoxy1G01022 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 1.8e-76 290.0 208 72.1
Thhalv10006994m.g Eutrema salsugineum HOM05D003167 ORTHO05D003929 1.8e-76 290.0 205 71.7
Mapoly0001s0156 Marchantia polymorpha HOM05D003167 ORTHO05D003929 1.8e-76 290.0 209 70.3
SalBow8G1467 Salvia bowleyana HOM05D003167 ORTHO05D003929 1.8e-76 290.0 212 72.2
SalBow8G3947 Salvia bowleyana HOM05D003167 ORTHO05D003929 1.8e-76 290.0 212 72.2
Sopen10g034860 Solanum pennellii HOM05D003167 ORTHO05D003929 1.8e-76 290.0 208 70.7
PGSC0003DMG400040194 Solanum tuberosum HOM05D003167 ORTHO05D003929 1.8e-76 290.0 208 70.7
AagrBONN_evm.TU.Sc2ySwM_344.2239 Anthoceros agrestis HOM05D003167 ORTHO05D003929 2.4e-76 289.7 211 69.2
A09p68130 Brassica napus HOM05D003167 ORTHO05D003929 2.4e-76 289.7 205 71.2
C08p52570 Brassica napus HOM05D003167 ORTHO05D003929 2.4e-76 289.7 205 71.7
BcaC05g24486 Brassica carinata HOM05D003167 ORTHO05D003929 3.2e-76 289.3 205 70.7
Peaxi162Scf01089g10011 Petunia axillaris HOM05D003167 ORTHO05D003929 4.1e-76 288.9 210 69.0
QL07p041296 Quercus lobata HOM05D003167 ORTHO05D003929 4.1e-76 288.9 212 71.7
MD14G1096200 Malus domestica HOM05D003167 ORTHO05D003929 5.4e-76 288.5 212 69.8
Pp3c27_420 Physcomitrium patens HOM05D003167 ORTHO05D003929 5.4e-76 288.5 212 67.9
PGR142G4079 Punica granatum HOM05D003167 ORTHO05D003929 5.4e-76 288.5 212 69.8
HPP92_017793 Vanilla planifolia HOM05D003167 ORTHO05D003929 7.0e-76 288.1 212 68.9
A10p02430 Brassica napus HOM05D003167 ORTHO05D003929 9.2e-76 287.7 205 70.7
CARHR003240 Cardamine hirsuta HOM05D003167 ORTHO05D003929 9.2e-76 287.7 208 69.2
TPR.G27088 Trifolium pratense HOM05D003167 ORTHO05D003929 9.2e-76 287.7 205 73.2
Sp1g02770 Schrenkiella parvula HOM05D003167 ORTHO05D003929 2.0e-75 286.6 204 71.6
Hund04098 Selenicereus undatus HOM05D003167 ORTHO05D003929 2.7e-75 286.2 210 69.0
Glyma.19G188800 Glycine max HOM05D003167 ORTHO05D003929 3.5e-75 285.8 209 69.4
BolC5t29003H Brassica oleracea HOM05D003167 ORTHO05D003929 5.9e-75 285.0 205 70.2
Sc01g0003900 Simmondsia chinensis HOM05D003167 ORTHO05D003929 7.8e-75 284.6 211 68.2
Zm00001eb061170 Zea mays HOM05D003167 ORTHO05D003929 7.8e-75 284.6 209 71.3
Prupe.7G122300 Prunus persica HOM05D003167 ORTHO05D003929 1.0e-74 284.3 184 77.7
Lj8P306T56 Lonicera japonica HOM05D003167 ORTHO05D003929 5.0e-74 282.0 212 69.3
Thecc.06G013600 Theobroma cacao HOM05D003167 ORTHO05D003929 1.9e-73 280.0 209 70.3
AL1G13510 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 4.3e-73 278.9 210 66.7
Nitab4.5_0002027g0020 Nicotiana tabacum HOM05D003167 ORTHO05D003929 4.3e-73 278.9 210 68.1
AT1G03910 Arabidopsis thaliana HOM05D003167 ORTHO05D003929 7.3e-73 278.1 210 66.7
Psat6g078080 Pisum sativum HOM05D003167 ORTHO05D003929 9.5e-73 277.7 189 75.1
PSO210G0575 Papaver somniferum HOM05D003167 ORTHO05D003929 1.6e-72 276.9 209 67.5
Carub.0001s0306 Capsella rubella HOM05D003167 ORTHO05D003929 8.0e-72 274.6 208 66.8
Os03g0800100 Oryza sativa ssp. japonica HOM05D003167 ORTHO05D003929 2.3e-71 273.1 210 67.6
Cpa.g.sc5.120 Carica papaya HOM05D003167 ORTHO05D003929 4.0e-71 272.3 212 67.5
SHI27742 Sapria himalayana HOM05D003167 ORTHO05D003929 5.2e-71 271.9 218 66.5
BcaC07g42222 Brassica carinata HOM05D003167 ORTHO05D003929 3.4e-70 269.2 208 68.8
BraA09t42148Z Brassica rapa HOM05D003167 ORTHO05D003929 3.4e-70 269.2 250 58.8
CAN.G738.3 Capsicum annuum HOM05D003167 ORTHO05D003929 1.1e-65 254.2 200 65.0
CARHR131270 Cardamine hirsuta HOM05D003167 ORTHO05D003929 3.3e-65 252.7 209 63.6
Carub.0004s1866 Capsella rubella HOM05D003167 ORTHO05D003929 4.7e-64 248.8 208 61.5
AL4G33010 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 6.2e-64 248.4 206 63.1
Thecc.08G192100 Theobroma cacao HOM05D003167 ORTHO05D003929 7.5e-62 241.5 211 65.9
SMO169G0108 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 4.9e-61 238.8 211 60.2
Oeu005667.1 Olea europaea HOM05D003167 ORTHO05D003929 4.1e-60 235.7 161 73.9
CBR_g4119 Chara braunii HOM05D003167 ORTHO05D003929 1.3e-58 230.7 200 60.5
COL.COLO4_17620 Corchorus olitorius HOM05D003167 ORTHO05D003929 4.9e-53 212.2 211 58.3
PGR083G2067 Punica granatum HOM05D003167 ORTHO05D003929 1.6e-51 207.2 210 54.8
Psat3g037760 Pisum sativum HOM05D003167 ORTHO05D003929 2.7e-51 206.5 129 79.8
Glyma.13G148300 Glycine max HOM05D003167 ORTHO05D003929 4.6e-51 205.7 129 79.1
SEGI_24622 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 6.6e-50 201.8 132 77.3
Atru.chr10.1911 Acer truncatum HOM05D003167 ORTHO05D003929 8.6e-50 201.4 207 56.5
Atru.chr10.2405 Acer truncatum HOM05D003167 ORTHO05D003929 1.1e-49 201.1 206 54.4
Cc10_g12700 Coffea canephora HOM05D003167 ORTHO05D003929 7.1e-44 181.8 104 84.6
AUR62007183 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.3e-42 177.6 217 51.6
EL10Ac3g06890 Beta vulgaris HOM05D003167 ORTHO05D003929 1.7e-42 177.2 207 51.2
SMO364G0524 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 1.7e-42 177.2 212 49.5
Cc07_g17880 Coffea canephora HOM05D003167 ORTHO05D003929 1.4e-36 157.5 206 48.1
FAN26G0867 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.3e-34 151.0 222 46.4
FAN26G2184 Fragaria x ananassa HOM05D003167 ORTHO05D003929 5.1e-34 149.1 222 46.4
Zm00001eb032700 Zea mays HOM05D003167 ORTHO05D003929 6.6e-34 148.7 129 65.9
FvH4_1g06450 Fragaria vesca HOM05D003167 ORTHO05D003929 1.9e-33 147.1 213 46.9
FAN23G0551 Fragaria x ananassa HOM05D003167 ORTHO05D003929 5.6e-33 145.6 222 45.9
FAN19G3088 Fragaria x ananassa HOM05D003167 ORTHO05D003929 9.6e-33 144.8 213 46.5
FAN28G1035 Fragaria x ananassa HOM05D003167 ORTHO05D003929 2.8e-32 143.3 215 47.4
AUR62007182 Chenopodium quinoa HOM05D003167 ORTHO05D003929 6.2e-32 142.1 146 58.9
MD12G1102200 Malus domestica HOM05D003167 ORTHO05D003929 2.4e-31 140.2 91 80.2
Eucgr.D02277 Eucalyptus grandis HOM05D003167 ORTHO05D003929 6.9e-31 138.7 210 41.4
Potri.001G242900 Populus trichocarpa HOM05D003167 ORTHO05D003929 1.3e-29 134.4 126 57.9
RcHm_v2.0_Chr2g0092191 Rosa chinensis HOM05D003167 ORTHO05D003929 2.9e-29 133.3 219 43.8
PRCOL_00002534 Prasinoderma coloniale HOM05D003167 ORTHO05D003929 1.9e-28 130.6 187 39.6
Hma1.2p1_0033F.1_g020920 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 5.1e-26 122.5 107 62.6
CARHR131200 Cardamine hirsuta HOM05D003167 ORTHO05D003929 4.3e-25 119.4 87 64.4
Hma1.2p1_2996F.1_g331470 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 7.4e-25 118.6 107 60.7
Cc04_g07780 Coffea canephora HOM05D003167 ORTHO05D003929 1.6e-24 117.5 86 66.3
AUR62018820 Chenopodium quinoa HOM05D003167 ORTHO05D003929 3.7e-24 116.3 214 40.2
SMO301G0016 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 6.5e-21 105.5 212 37.3
Zm00001eb382350 Zea mays HOM05D003167 ORTHO05D003929 6.5e-21 105.5 79 73.4
SEGI_06196 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 8.4e-21 105.1 82 63.4
SEGI_13117 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 8.4e-21 105.1 82 63.4
Aqoxy3G01485 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 1.4e-20 104.4 145 42.8
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 3.3e-17 93.2 124 49.2
Lj2g0005784 Lotus japonicus HOM05D003167 ORTHO05D003929 5.3e-15 85.9 70 57.1
AUR62022074 Chenopodium quinoa HOM05D003167 ORTHO05D003929 5.8e-14 82.4 173 38.7
Nitab4.5_0007768g0050 Nicotiana tabacum HOM05D003167 ORTHO05D003929 1.3e-13 81.3 81 54.3
Cre09.g398650 Chlamydomonas reinhardtii HOM05D003167 ORTHO05D003929 1.7e-13 80.9 166 33.7
AUR62009153 Chenopodium quinoa HOM05D003167 ORTHO05D003929 2.2e-13 80.5 169 39.1
Oeu026917.1 Olea europaea HOM05D003167 ORTHO05D003929 8.4e-13 78.6 172 33.1
Sp4g05130 Schrenkiella parvula HOM05D003167 ORTHO05D003929 7.1e-12 75.5 151 40.4
COL.COLO4_36480 Corchorus olitorius HOM05D003167 ORTHO05D003929 1.6e-11 74.3 83 55.4
RcHm_v2.0_Chr5g0072821 Rosa chinensis HOM05D003167 ORTHO05D003929 3.5e-11 73.2 44 79.5
Nitab4.5_0000883g0050 Nicotiana tabacum HOM05D003167 ORTHO05D003929 1.0e-10 71.6 66 66.7
CARHR131220 Cardamine hirsuta HOM05D003167 ORTHO05D003929 1.9e-09 67.4 60 56.7
SEGI_26849 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 5.7e-09 65.9 48 68.8
CDE07G1466 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 1.3e-08 64.7 52 57.7
MD12G1102100 Malus domestica HOM05D003167 ORTHO05D003929 2.2e-08 63.9 37 75.7


User provided reference genes

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