Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 4.8e-252 874.0 439 100.0
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 6.5e-124 448.4 439 59.2
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 1.2e-104 384.4 472 51.1
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.9e-87 326.6 479 45.9
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 8.3e-87 325.1 479 45.7
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.5e-83 313.5 491 41.5
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 2.8e-82 310.1 462 43.9
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 7.6e-80 302.0 495 42.6
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 4.9e-79 299.3 490 41.2
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.2e-77 294.7 488 40.2
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 6.8e-73 278.9 504 39.1
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 1.2e-72 278.1 497 38.2
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 7.6e-72 275.4 496 39.1
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 1.4e-70 271.2 503 38.6
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 4.2e-70 269.6 487 40.2
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 5.4e-70 269.2 495 37.4
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 9.3e-70 268.5 480 39.8
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 9.3e-70 268.5 506 37.7
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 1.2e-69 268.1 498 38.4
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 5.1e-68 262.7 497 38.4
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 1.5e-67 261.2 475 39.4
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 3.3e-67 260.0 464 40.5
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 7.3e-67 258.8 475 39.4
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 2.1e-66 257.3 503 37.8
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 8.1e-66 255.4 496 38.3
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 1.1e-65 255.0 493 38.1
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 1.4e-65 254.6 495 37.6
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 3.1e-65 253.4 496 37.7
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 3.1e-65 253.4 480 38.8
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 4.0e-65 253.1 502 36.7
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 5.3e-65 252.7 484 37.6
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 9.0e-65 251.9 434 39.2
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 2.0e-64 250.8 490 36.7
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 2.0e-64 250.8 486 37.2
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 7.6e-64 248.8 507 36.7
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 7.6e-64 248.8 479 37.4
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 2.2e-63 247.3 435 38.9
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 2.2e-63 247.3 492 36.4
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 4.9e-63 246.1 441 38.5
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 1.1e-62 245.0 459 39.2
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 1.1e-59 235.0 498 36.1
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 5.6e-59 232.6 475 36.2
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 2.8e-58 230.3 511 37.4
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 2.8e-58 230.3 443 38.4
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 2.8e-58 230.3 502 35.3
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 1.1e-57 228.4 483 34.6
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 1.4e-57 228.0 530 35.7
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 1.4e-57 228.0 465 37.2
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 6.9e-57 225.7 442 36.9
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 9.0e-57 225.3 411 38.0
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 2.6e-56 223.8 511 37.2
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 4.5e-56 223.0 470 37.2
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 9.9e-56 221.9 532 33.6
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.3e-55 221.5 499 35.9
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 1.7e-55 221.1 484 34.5
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 1.7e-55 221.1 493 33.9
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 6.4e-55 219.2 514 34.6
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 8.4e-55 218.8 516 35.9
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.1e-54 218.4 484 34.7
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 1.4e-54 218.0 510 35.5
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 1.4e-54 218.0 510 33.7
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 5.4e-54 216.1 485 34.4
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 7.1e-54 215.7 505 34.9
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.6e-53 214.5 534 33.5
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 7.9e-53 212.2 472 36.2
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 1.8e-52 211.1 483 35.4
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 3.0e-52 210.3 510 33.3
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 3.9e-52 209.9 456 35.5
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 5.1e-52 209.5 413 37.0
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 8.7e-52 208.8 425 37.4
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 2.5e-51 207.2 510 33.1
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 7.4e-51 205.7 456 32.9
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.8e-49 201.1 466 32.6
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 2.4e-49 200.7 413 35.8
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 2.0e-48 197.6 460 34.6
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 4.5e-48 196.4 425 35.1
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 5.8e-48 196.1 430 33.3
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.2e-47 194.1 468 34.6
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.2e-47 194.1 468 34.6
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 1.4e-46 191.4 480 32.3
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 1.4e-46 191.4 414 36.0
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 1.9e-46 191.0 500 34.6
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 2.5e-46 190.7 430 33.5
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 2.5e-46 190.7 427 33.7
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 3.2e-46 190.3 495 33.3
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 4.2e-46 189.9 430 35.6
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 1.2e-45 188.3 436 34.9
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 1.6e-45 188.0 428 34.8
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 1.6e-45 188.0 428 34.8
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 1.6e-45 188.0 428 34.8
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 1.6e-45 188.0 421 36.1
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 3.5e-45 186.8 497 34.6
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 5.1e-44 183.0 413 32.7
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 3.3e-43 180.3 511 31.3
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 4.3e-43 179.9 486 34.2
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 4.3e-43 179.9 466 31.5
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 5.7e-43 179.5 421 33.0
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 1.6e-42 177.9 483 33.5
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 2.1e-42 177.6 465 31.4
ECA234G0697 Erigeron canadensis HOM05D006741 ORTHO05D008434 3.1e-41 173.7 341 37.5
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 5.0e-39 166.4 485 33.6
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.0e-36 158.7 466 32.2
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 6.7e-36 156.0 353 31.7
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.2e-31 141.0 376 35.1
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 2.0e-27 127.9 250 36.4
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 1.1e-25 122.1 229 38.0
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 1.4e-25 121.7 425 30.1
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 3.4e-24 117.1 499 26.3
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 5.0e-23 113.2 249 34.9
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 3.9e-20 103.6 378 29.4
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 2.0e-19 101.3 205 37.6
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 3.7e-18 97.1 324 29.6
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.5e-14 85.1 228 32.5
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 2.6e-11 74.3 141 36.9
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 3.3e-11 73.9 162 33.3
Mapoly0006s0242 Marchantia polymorpha HOM05D024617 ORTHO05D023508 8.5e-07 59.3 333 24.3


User provided reference genes

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