Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4673 Erigeron canadensis HOM05D004821 ORTHO05D005711 1.3e-221 772.7 380 100.0
Lsat_1_v5_gn_7_44620 Lactuca sativa HOM05D004821 ORTHO05D005711 2.8e-115 419.5 271 76.8
HanXRQChr03g0094031 Helianthus annuus HOM05D004821 ORTHO05D005711 5.7e-100 368.6 271 68.6
CiPaw.02G124700 Carya illinoinensis HOM05D004821 ORTHO05D005711 1.8e-93 347.1 272 63.6
Cfa008514 Carpinus fangiana HOM05D004821 ORTHO05D005711 2.0e-92 343.6 272 64.0
Ca_13543_v3 Cicer arietinum L. HOM05D004821 ORTHO05D005711 3.3e-92 342.8 272 63.6
Phvul.003G074500 Phaseolus vulgaris HOM05D004821 ORTHO05D005711 1.7e-91 340.5 263 63.9
Solyc04g008520.3 Solanum lycopersicum HOM05D004821 ORTHO05D005711 1.7e-91 340.5 272 62.5
Haze_11130 Corylus avellana HOM05D004821 ORTHO05D005711 2.8e-91 339.7 272 63.2
Hund22594 Selenicereus undatus HOM05D004821 ORTHO05D005711 4.8e-91 339.0 272 62.9
CANSAT56G1350 Cannabis sativa HOM05D004821 ORTHO05D005711 6.3e-91 338.6 272 64.0
Actinidia18397 Actinidia chinensis HOM05D004821 ORTHO05D005711 8.2e-91 338.2 272 63.2
Sopen04g003670 Solanum pennellii HOM05D004821 ORTHO05D005711 8.2e-91 338.2 272 62.1
arahy.Tifrunner.gnm1.ann1.PJYW2S Arachis hypogaea HOM05D004821 ORTHO05D005711 3.1e-90 336.3 272 62.5
arahy.Tifrunner.gnm1.ann1.TNA3AF Arachis hypogaea HOM05D004821 ORTHO05D005711 3.1e-90 336.3 272 62.5
Lj4g0002865 Lotus japonicus HOM05D004821 ORTHO05D005711 4.1e-90 335.9 272 62.9
Peaxi162Scf00329g00933 Petunia axillaris HOM05D004821 ORTHO05D005711 5.3e-90 335.5 272 61.8
QL10p064358 Quercus lobata HOM05D004821 ORTHO05D005711 5.3e-90 335.5 272 62.9
VMungo1215G0856 Vigna mungo HOM05D004821 ORTHO05D005711 9.1e-90 334.7 263 63.1
Cc03_g15980 Coffea canephora HOM05D004821 ORTHO05D005711 1.2e-89 334.3 272 62.1
Nn1g09422 Nelumbo nucifera HOM05D004821 ORTHO05D005711 1.6e-89 334.0 269 63.2
TPR.G5989 Trifolium pratense HOM05D004821 ORTHO05D005711 1.6e-89 334.0 272 61.0
RcHm_v2.0_Chr2g0084461 Rosa chinensis HOM05D004821 ORTHO05D005711 2.0e-89 333.6 272 62.1
PGSC0003DMG400029438 Solanum tuberosum HOM05D004821 ORTHO05D005711 2.0e-89 333.6 272 61.0
CiPaw.01G201700 Carya illinoinensis HOM05D004821 ORTHO05D005711 4.5e-89 332.4 272 62.1
Ciclev10021021m.g Citrus clementina HOM05D004821 ORTHO05D005711 4.5e-89 332.4 272 62.5
Oeu033086.1 Olea europaea HOM05D004821 ORTHO05D005711 7.7e-89 331.6 272 62.1
Atru.chr3.1996 Acer truncatum HOM05D004821 ORTHO05D005711 2.9e-88 329.7 273 63.0
Cpa.g.sc151.7 Carica papaya HOM05D004821 ORTHO05D005711 2.9e-88 329.7 272 62.1
Psat4g001240 Pisum sativum HOM05D004821 ORTHO05D005711 2.9e-88 329.7 272 60.3
PGR042G3220 Punica granatum HOM05D004821 ORTHO05D005711 3.8e-88 329.3 272 60.3
Manes.01G010100 Manihot esculenta HOM05D004821 ORTHO05D005711 5.0e-88 328.9 272 62.5
MSTRG.4551 Avicennia marina HOM05D004821 ORTHO05D005711 8.5e-88 328.2 272 62.1
Nitab4.5_0006607g0020 Nicotiana tabacum HOM05D004821 ORTHO05D005711 1.9e-87 327.0 271 60.5
FvH4_1g00191 Fragaria vesca HOM05D004821 ORTHO05D005711 2.5e-87 326.6 272 61.8
Hma1.2p1_0872F.1_g231140 Hydrangea macrophylla HOM05D004821 ORTHO05D005711 2.5e-87 326.6 271 62.7
Prupe.7G269800 Prunus persica HOM05D004821 ORTHO05D005711 2.5e-87 326.6 272 60.7
Sabra07G0115900 Salix brachista HOM05D004821 ORTHO05D005711 3.2e-87 326.2 271 63.1
Potri.007G144900 Populus trichocarpa HOM05D004821 ORTHO05D005711 4.2e-87 325.9 271 62.4
COL.COLO4_16819 Corchorus olitorius HOM05D004821 ORTHO05D005711 5.5e-87 325.5 271 61.3
Potri.017G007300 Populus trichocarpa HOM05D004821 ORTHO05D005711 5.5e-87 325.5 271 62.7
Glyma.17G000700 Glycine max HOM05D004821 ORTHO05D005711 7.2e-87 325.1 264 60.6
CAN.G458.7 Capsicum annuum HOM05D004821 ORTHO05D005711 9.4e-87 324.7 274 59.1
Nitab4.5_0000129g0470 Nicotiana tabacum HOM05D004821 ORTHO05D005711 9.4e-87 324.7 271 60.9
Ah.13g073170 Amaranthus hybridus HOM05D004821 ORTHO05D005711 2.1e-86 323.6 276 60.1
Eucgr.A00428 Eucalyptus grandis HOM05D004821 ORTHO05D005711 2.1e-86 323.6 272 59.6
Medtr4g134950 Medicago truncatula HOM05D004821 ORTHO05D005711 2.1e-86 323.6 272 59.6
PSO675G6376 Papaver somniferum HOM05D004821 ORTHO05D005711 2.7e-86 323.2 272 62.1
Thecc.03G204200 Theobroma cacao HOM05D004821 ORTHO05D005711 6.1e-86 322.0 272 60.7
PSO732G0644 Papaver somniferum HOM05D004821 ORTHO05D005711 8.0e-86 321.6 272 61.8
Aqoxy5G00034 Aquilegia oxysepala HOM05D004821 ORTHO05D005711 1.0e-85 321.2 270 63.3
CSS0009446 Camellia sinensis var. sinensis HOM05D004821 ORTHO05D005711 1.0e-85 321.2 272 59.9
CSS0027099 Camellia sinensis var. sinensis HOM05D004821 ORTHO05D005711 1.0e-85 321.2 272 59.9
Lj6A619G67 Lonicera japonica HOM05D004821 ORTHO05D005711 1.0e-85 321.2 272 60.3
MBI10_g16333_MAGBIO Magnolia biondii HOM05D004821 ORTHO05D005711 5.2e-85 318.9 268 61.6
Gohir.A11G015800 Gossypium hirsutum HOM05D004821 ORTHO05D005711 1.2e-84 317.8 272 59.9
SGA_v2.0_scaffold12G06219 Striga asiatica HOM05D004821 ORTHO05D005711 1.2e-84 317.8 272 59.6
Carub.0004s2652 Capsella rubella HOM05D004821 ORTHO05D005711 1.5e-84 317.4 272 59.2
Eucgr.A00426 Eucalyptus grandis HOM05D004821 ORTHO05D005711 1.5e-84 317.4 272 58.8
BcaB01g03351 Brassica carinata HOM05D004821 ORTHO05D005711 2.6e-84 316.6 269 59.1
C03p29340 Brassica napus HOM05D004821 ORTHO05D005711 3.3e-84 316.2 269 58.7
CsaV3_6G037260 Cucumis sativus L. HOM05D004821 ORTHO05D005711 3.3e-84 316.2 272 59.2
Thhalv10001539m.g Eutrema salsugineum HOM05D004821 ORTHO05D005711 3.3e-84 316.2 269 59.5
FAN26G2560 Fragaria x ananassa HOM05D004821 ORTHO05D005711 3.3e-84 316.2 272 59.9
FAN26G2598 Fragaria x ananassa HOM05D004821 ORTHO05D005711 3.3e-84 316.2 272 59.9
MD00G1087400 Malus domestica HOM05D004821 ORTHO05D005711 3.3e-84 316.2 272 59.2
Migut.G00920 Erythranthe guttata HOM05D004821 ORTHO05D005711 4.4e-84 315.8 272 59.6
Lalb_Chr13g0304481 Lupinus albus HOM05D004821 ORTHO05D005711 9.7e-84 314.7 275 55.3
MD15G1143200 Malus domestica HOM05D004821 ORTHO05D005711 9.7e-84 314.7 271 59.0
Actinidia11430 Actinidia chinensis HOM05D004821 ORTHO05D005711 1.3e-83 314.3 272 59.6
ClCG09G014480 Citrullus lanatus HOM05D004821 ORTHO05D005711 1.7e-83 313.9 272 58.5
EL10Ac3g06166 Beta vulgaris HOM05D004821 ORTHO05D005711 2.2e-83 313.5 272 58.1
Gorai.007G016400 Gossypium raimondii HOM05D004821 ORTHO05D005711 2.2e-83 313.5 272 59.6
DCAR_029913 Daucus carota HOM05D004821 ORTHO05D005711 3.7e-83 312.8 269 58.0
Sabra17G0008100 Salix brachista HOM05D004821 ORTHO05D005711 3.7e-83 312.8 271 60.9
Rhsim09G0003600 Rhododendron simsii HOM05D004821 ORTHO05D005711 4.8e-83 312.4 272 58.8
GSVIVG01038250001 Vitis vinifera HOM05D004821 ORTHO05D005711 4.8e-83 312.4 272 59.6
THA.LOC104804303 Tarenaya hassleriana HOM05D004821 ORTHO05D005711 8.2e-83 311.6 272 58.1
A03p24610 Brassica napus HOM05D004821 ORTHO05D005711 1.1e-82 311.2 269 57.6
BolC3t15281H Brassica oleracea HOM05D004821 ORTHO05D005711 1.1e-82 311.2 281 56.6
BraA03t11666Z Brassica rapa HOM05D004821 ORTHO05D005711 1.1e-82 311.2 269 57.6
AL4G42830 Arabidopsis lyrata HOM05D004821 ORTHO05D005711 2.4e-82 310.1 272 56.6
AT2G43950 Arabidopsis thaliana HOM05D004821 ORTHO05D005711 2.4e-82 310.1 272 56.6
CARHR139130 Cardamine hirsuta HOM05D004821 ORTHO05D005711 3.1e-82 309.7 272 56.2
THA.LOC104802343 Tarenaya hassleriana HOM05D004821 ORTHO05D005711 1.6e-81 307.4 269 57.6
Sp4g26050 Schrenkiella parvula HOM05D004821 ORTHO05D005711 2.0e-81 307.0 272 56.6
Migut.N03030 Erythranthe guttata HOM05D004821 ORTHO05D005711 4.5e-81 305.8 272 59.6
Sed0001216 Sechium edule HOM05D004821 ORTHO05D005711 1.3e-80 304.3 272 57.4
Aa31LG1G25650 Aethionema arabicum HOM05D004821 ORTHO05D005711 2.9e-80 303.1 269 55.4
BcaB06g29351 Brassica carinata HOM05D004821 ORTHO05D005711 3.8e-80 302.8 272 55.9
SalBow3G1744 Salvia bowleyana HOM05D004821 ORTHO05D005711 3.8e-80 302.8 310 54.5
BraA04t18773Z Brassica rapa HOM05D004821 ORTHO05D005711 6.5e-80 302.0 272 55.1
A04p33140 Brassica napus HOM05D004821 ORTHO05D005711 8.5e-80 301.6 272 54.8
C04p70840 Brassica napus HOM05D004821 ORTHO05D005711 1.9e-79 300.4 272 55.5
Duzib205G0343 Durio zibethinus HOM05D004821 ORTHO05D005711 4.2e-79 299.3 294 54.4
BcaB06g29509 Brassica carinata HOM05D004821 ORTHO05D005711 1.2e-78 297.7 265 56.2
vmacro00722 Vaccinium macrocarpon HOM05D004821 ORTHO05D005711 1.8e-77 293.9 302 54.3
Gohir.A12G247900 Gossypium hirsutum HOM05D004821 ORTHO05D005711 2.3e-77 293.5 272 54.8
Gorai.008G266600 Gossypium raimondii HOM05D004821 ORTHO05D005711 2.3e-77 293.5 272 54.8
AUR62002483 Chenopodium quinoa HOM05D004821 ORTHO05D005711 5.2e-77 292.4 323 49.5
Gohir.D12G248600 Gossypium hirsutum HOM05D004821 ORTHO05D005711 1.2e-76 291.2 272 54.4
AUR62023709 Chenopodium quinoa HOM05D004821 ORTHO05D005711 2.6e-76 290.0 272 56.6
Gohir.D11G015800 Gossypium hirsutum HOM05D004821 ORTHO05D005711 4.8e-75 285.8 272 57.0
Gohir.A08G102400 Gossypium hirsutum HOM05D004821 ORTHO05D005711 8.3e-75 285.0 269 54.6
Thecc.05G001800 Theobroma cacao HOM05D004821 ORTHO05D005711 2.4e-74 283.5 272 55.1
Gorai.004G122500 Gossypium raimondii HOM05D004821 ORTHO05D005711 2.7e-73 280.0 269 53.9
Gohir.D08G113600 Gossypium hirsutum HOM05D004821 ORTHO05D005711 3.5e-73 279.6 269 53.5
CDE02G4358 Ceratophyllum demersum HOM05D004821 ORTHO05D005711 3.3e-71 273.1 270 53.0
MELO3C014389.2 Cucumis melo HOM05D004821 ORTHO05D005711 4.2e-71 272.7 237 57.4
Eucgr.L00828 Eucalyptus grandis HOM05D004821 ORTHO05D005711 4.7e-70 269.2 272 52.2
HPP92_004517 Vanilla planifolia HOM05D004821 ORTHO05D005711 1.4e-69 267.7 269 51.7
TAR362G0479 Trochodendron aralioides HOM05D004821 ORTHO05D005711 7.0e-66 255.4 279 51.3
ATR0743G163 Amborella trichopoda HOM05D004821 ORTHO05D005711 3.5e-65 253.1 255 50.6
unitig_37.g12004 Utricularia gibba HOM05D004821 ORTHO05D005711 4.5e-65 252.7 272 49.6
Os02g0608900 Oryza sativa ssp. japonica HOM05D004821 ORTHO05D005711 7.3e-63 245.4 284 47.9
Duzib084G0132 Durio zibethinus HOM05D004821 ORTHO05D005711 1.7e-59 234.2 272 47.4
BcaC02g07141 Brassica carinata HOM05D004821 ORTHO05D005711 1.4e-58 231.1 277 48.7
Hund12277 Selenicereus undatus HOM05D004821 ORTHO05D005711 2.4e-58 230.3 229 53.7
HPP92_004526 Vanilla planifolia HOM05D004821 ORTHO05D005711 4.1e-58 229.6 250 49.2
Dinv24752 Davidia involucrata HOM05D004821 ORTHO05D005711 2.3e-56 223.8 193 61.7
Eucgr.D01249 Eucalyptus grandis HOM05D004821 ORTHO05D005711 3.7e-51 206.5 199 56.8
Pp3c26_11540 Physcomitrium patens HOM05D004821 ORTHO05D005711 1.1e-50 204.9 269 41.3
Ah.07g203210 Amaranthus hybridus HOM05D004821 ORTHO05D005711 5.4e-50 202.6 169 61.5
Pp3c3_3220 Physcomitrium patens HOM05D004821 ORTHO05D005711 5.1e-48 196.1 269 40.5
Zm00001eb133840 Zea mays HOM05D004821 ORTHO05D005711 5.1e-48 196.1 213 46.9
Mapoly0065s0080 Marchantia polymorpha HOM05D004821 ORTHO05D005711 9.5e-47 191.8 265 38.5
SMO119G0235 Selaginella moellendorffii HOM05D004821 ORTHO05D005711 1.2e-46 191.4 263 39.2
Eucgr.D01533 Eucalyptus grandis HOM05D004821 ORTHO05D005711 4.7e-46 189.5 198 53.5
AagrBONN_evm.TU.Sc2ySwM_362.2829 Anthoceros agrestis HOM05D004821 ORTHO05D005711 5.4e-42 176.0 240 39.6
Sc25g0003030 Simmondsia chinensis HOM05D004821 ORTHO05D005711 1.3e-40 171.4 242 40.9
CBR_g30320 Chara braunii HOM05D004821 ORTHO05D005711 1.6e-33 147.9 284 34.5
Zm00001eb246750 Zea mays HOM05D004821 ORTHO05D005711 3.6e-30 136.7 208 42.3
QL10p064343 Quercus lobata HOM05D004821 ORTHO05D005711 2.6e-28 130.6 84 71.4
RcHm_v2.0_Chr7g0203201 Rosa chinensis HOM05D004821 ORTHO05D005711 9.9e-28 128.6 150 49.3
BcaB04g18803 Brassica carinata HOM05D004821 ORTHO05D005711 3.2e-26 123.6 77 74.0
Actinidia34565 Actinidia chinensis HOM05D004821 ORTHO05D005711 1.1e-23 115.2 68 75.0
BcaC05g24570 Brassica carinata HOM05D000813 ORTHO05D004282 5.6e-23 112.8 91 60.4
MD09G1202400 Malus domestica HOM05D004821 ORTHO05D005711 6.2e-22 109.4 100 56.0
Oeu053428.1 Olea europaea HOM05D004821 ORTHO05D005711 8.1e-22 109.0 121 52.1
ECA232G1130 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-15 87.0 85 52.9
ECA236G0671 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.6e-15 86.3 97 54.6
ECA234G1308 Erigeron canadensis HOM05D004261 ORTHO05D005642 7.4e-15 85.9 92 56.5
ECA233G1376 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-15 85.5 49 81.6
FAN07G0128 Fragaria x ananassa HOM05D004821 ORTHO05D005711 1.6e-14 84.7 91 46.2
ECA247G0254 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-13 81.6 55 70.9
BcaC07g42475 Brassica carinata HOM05D004821 ORTHO05D005711 2.4e-13 80.9 58 65.5
BcaB02g11099 Brassica carinata HOM05D004821 ORTHO05D005711 3.1e-13 80.5 56 66.1
Ah.07g203220 Amaranthus hybridus HOM05D004821 ORTHO05D005711 3.8e-11 73.6 60 51.7
ECA240G0008 Erigeron canadensis HOM05D046237 ORTHO05D187881 6.5e-11 72.8 49 71.4
ECA238G4673 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-10 70.5 56 64.3
CDE09G1416 Ceratophyllum demersum HOM05D004821 ORTHO05D005711 1.2e-09 68.6 178 32.0
CARHR257120 Cardamine hirsuta HOM05D004821 ORTHO05D005711 1.6e-09 68.2 63 46.0
C07p46620 Brassica napus HOM05D004821 ORTHO05D005711 7.9e-09 65.9 65 46.2
BolC7t45177H Brassica oleracea HOM05D004821 ORTHO05D005711 7.9e-09 65.9 65 46.2
ECA234G1232 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-08 65.1 93 47.3
Migut.G00919 Erythranthe guttata HOM05D004821 ORTHO05D005711 8.7e-08 62.4 51 54.9
ECA236G3254 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-07 58.9 61 49.2
ECA247G3636 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 58.5 56 53.6
Hund22592 Selenicereus undatus HOM05D004821 ORTHO05D005711 1.3e-06 58.5 57 43.9
ECA248G0242 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 58.2 40 65.0
CDE09G1042 Ceratophyllum demersum HOM05D001480 ORTHO05D001331 2.8e-06 57.4 60 45.0
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.8e-06 57.4 62 48.4
ECA246G4795 Erigeron canadensis HOM05D000028 ORTHO05D001176 6.2e-06 56.2 78 43.6


User provided reference genes

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