Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 0.0e+00 1080.5 811 100.0
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.5e-161 573.5 423 72.1
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 8.3e-157 558.5 420 71.2
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 6.6e-146 522.3 346 76.0
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 3.1e-143 513.5 346 74.3
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 3.1e-143 513.5 346 75.1
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 3.1e-143 513.5 346 75.1
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 6.8e-143 512.3 348 76.1
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 4.4e-142 509.6 346 75.7
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 1.7e-141 507.7 345 75.1
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 2.9e-141 506.9 344 74.7
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 4.9e-141 506.1 348 74.1
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 8.3e-141 505.4 345 74.2
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 3.2e-140 503.4 347 74.4
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.6e-139 501.1 346 74.3
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 2.0e-139 500.7 346 73.4
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.5e-139 500.0 346 73.4
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 4.6e-139 499.6 346 73.4
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 4.6e-139 499.6 346 73.4
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 1.3e-138 498.0 345 73.0
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 2.3e-138 497.3 346 72.8
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 2.3e-138 497.3 344 73.5
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 2.3e-138 497.3 346 72.8
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 2.3e-138 497.3 346 72.0
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 3.0e-138 496.9 344 73.8
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 1.1e-137 495.0 345 73.6
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.6e-137 492.7 346 73.7
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 2.1e-136 490.7 344 71.2
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 2.8e-136 490.3 345 74.2
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 3.6e-136 490.0 345 72.8
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 4.7e-136 489.6 345 72.5
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 6.2e-136 489.2 346 73.4
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.8e-135 487.6 345 72.5
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 2.6e-134 483.8 345 72.2
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.6e-134 483.8 346 71.4
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 2.6e-134 483.8 345 70.1
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 3.4e-134 483.4 348 70.1
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 5.8e-134 482.6 345 69.9
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 1.7e-133 481.1 345 72.5
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 1.7e-133 481.1 423 60.5
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 2.9e-133 480.3 348 70.4
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 4.9e-133 479.6 342 72.2
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 8.3e-133 478.8 348 69.5
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 2.4e-132 477.2 345 68.7
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 2.4e-132 477.2 345 69.6
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 4.1e-132 476.5 344 72.1
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.2e-131 474.9 349 68.8
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 1.2e-131 474.9 344 69.5
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.2e-131 474.9 344 72.7
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 1.2e-131 474.9 347 68.6
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 2.1e-131 474.2 346 70.8
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 2.1e-131 474.2 332 72.0
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 2.7e-131 473.8 347 67.7
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 2.7e-131 473.8 346 71.1
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 6.0e-131 472.6 346 70.5
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 7.8e-131 472.2 346 70.2
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 1.0e-130 471.9 345 70.7
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.3e-130 470.7 347 66.6
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 3.9e-130 469.9 347 67.1
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 5.1e-130 469.5 380 65.3
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 6.6e-130 469.2 346 69.1
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 8.6e-130 468.8 347 66.6
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 8.6e-130 468.8 347 66.6
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 8.6e-130 468.8 346 70.5
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 1.1e-129 468.4 347 66.3
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 2.5e-129 467.2 339 70.5
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 5.6e-129 466.1 346 66.8
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 5.6e-129 466.1 345 66.4
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 9.5e-129 465.3 351 67.5
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 9.5e-129 465.3 347 66.0
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 2.8e-128 463.8 345 66.4
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 4.7e-128 463.0 348 66.4
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 4.7e-128 463.0 347 67.4
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.1e-127 460.3 355 69.3
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 3.1e-127 460.3 343 71.1
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 2.0e-126 457.6 392 60.7
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 4.4e-126 456.4 346 68.8
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 4.4e-126 456.4 345 66.7
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.7e-125 454.5 300 76.7
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 2.9e-125 453.8 387 61.0
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 6.4e-125 452.6 351 69.5
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.4e-124 451.4 354 68.1
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 4.1e-124 449.9 300 75.7
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 5.4e-124 449.5 304 73.7
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.2e-123 448.4 299 77.3
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 8.6e-122 442.2 346 66.8
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 1.9e-121 441.0 345 65.5
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 9.6e-121 438.7 314 70.7
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 8.9e-119 432.2 323 66.3
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 3.5e-115 420.2 345 62.6
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.1e-113 415.2 312 67.3
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 3.3e-113 413.7 321 65.4
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.1e-111 408.7 282 69.1
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 6.0e-107 392.9 345 56.2
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.0e-106 392.1 341 56.3
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 3.4e-102 377.1 346 54.0
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 1.9e-92 344.7 337 51.6
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 4.6e-83 313.5 244 62.3
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 8.7e-82 309.3 327 50.5
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 3.4e-78 297.4 257 63.0
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 5.9e-78 296.6 314 51.6
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 6.5e-77 293.1 186 80.1
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.9e-74 283.9 370 48.9
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 2.2e-72 278.1 185 77.3
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 2.5e-68 264.6 184 67.4
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.9e-66 257.3 401 38.2
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.9e-66 257.3 401 38.2
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 5.1e-66 256.9 354 42.9
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.1e-65 255.8 400 37.5
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.8e-56 224.6 509 30.1
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 4.8e-56 223.8 341 41.3
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.2e-52 211.1 201 53.2
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 8.3e-48 196.4 124 75.0
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 4.1e-47 194.1 355 36.9
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 8.8e-42 176.4 114 74.6
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.5e-38 164.1 146 60.3
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 3.4e-17 94.7 71 67.6
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 4.4e-17 94.4 64 76.6
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.5e-17 93.6 174 35.1
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.9e-16 91.7 170 36.5
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 3.7e-16 91.3 61 67.2
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 2.4e-15 88.6 61 77.0
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 2.4e-15 88.6 65 69.2
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.1e-15 87.0 184 33.2
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.1e-15 87.0 172 34.9
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.2e-11 76.3 53 75.5


User provided reference genes

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