Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 7.0e-151 537.3 287 100.0
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.4e-47 194.1 298 45.6
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 2.9e-32 143.3 185 46.5
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 1.9e-31 140.6 302 37.1
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 5.5e-31 139.0 305 35.7
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 3.6e-30 136.3 302 35.1
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.8e-29 134.0 298 34.2
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 1.8e-29 134.0 193 44.6
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 4.0e-29 132.9 178 45.5
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 4.0e-29 132.9 305 35.4
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 8.8e-29 131.7 168 49.4
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 3.4e-28 129.8 309 34.3
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 3.4e-28 129.8 297 34.3
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 4.4e-28 129.4 302 34.4
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 7.5e-28 128.6 302 34.8
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 7.5e-28 128.6 162 48.1
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 7.5e-28 128.6 309 34.3
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 9.8e-28 128.3 309 34.3
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 9.8e-28 128.3 294 35.7
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.7e-27 127.5 297 33.7
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 2.2e-27 127.1 162 49.4
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 3.7e-27 126.3 161 49.1
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 8.3e-27 125.2 143 49.7
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 8.3e-27 125.2 307 34.5
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 1.8e-26 124.0 299 34.1
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 2.4e-26 123.6 173 45.1
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 3.1e-26 123.2 202 41.6
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 4.1e-26 122.9 196 41.8
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 4.1e-26 122.9 300 33.0
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 4.1e-26 122.9 305 33.1
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 9.1e-26 121.7 146 47.3
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 1.2e-25 121.3 309 32.4
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 2.0e-25 120.6 315 33.7
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 2.7e-25 120.2 303 32.0
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 3.5e-25 119.8 178 43.8
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 4.5e-25 119.4 301 32.9
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 5.9e-25 119.0 163 45.4
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.0e-24 118.2 298 34.2
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.7e-24 117.5 310 30.6
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 1.7e-24 117.5 303 32.7
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 2.3e-24 117.1 143 52.4
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 2.3e-24 117.1 335 31.9
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.9e-24 116.7 314 32.8
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 3.8e-24 116.3 143 47.6
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 5.0e-24 115.9 209 39.7
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 6.6e-24 115.5 137 48.2
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 2.5e-23 113.6 315 32.4
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 2.5e-23 113.6 295 30.8
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 3.3e-23 113.2 290 34.8
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 5.5e-23 112.5 304 33.2
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 7.2e-23 112.1 292 34.2
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.2e-22 111.3 152 46.7
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.6e-22 110.9 154 45.5
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 4.7e-22 109.4 311 33.1
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 8.0e-22 108.6 323 30.7
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 1.4e-21 107.8 150 46.0
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 1.4e-21 107.8 281 33.1
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.4e-21 107.8 166 44.6
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.8e-21 107.5 310 33.5
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 2.3e-21 107.1 177 40.7
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 4.0e-21 106.3 160 44.4
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 1.5e-20 104.4 307 31.3
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 2.6e-20 103.6 97 56.7
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 2.6e-20 103.6 341 29.0
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 5.7e-20 102.4 107 53.3
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 5.7e-20 102.4 141 45.4
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.7e-19 100.9 313 38.3
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.2e-19 100.5 292 30.8
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 2.8e-19 100.1 116 50.0
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 6.3e-19 99.0 162 38.9
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 1.1e-18 98.2 301 31.6
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 2.4e-18 97.1 312 33.3
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 4.1e-18 96.3 161 42.2
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 5.4e-18 95.9 298 31.5
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 9.2e-18 95.1 295 30.2
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 1.2e-17 94.7 115 46.1
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.6e-17 94.4 292 31.8
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.6e-17 94.4 294 29.9
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 2.7e-17 93.6 102 50.0
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 2.7e-17 93.6 120 50.8
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 2.7e-17 93.6 202 33.7
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 5.9e-17 92.4 292 37.0
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 5.9e-17 92.4 173 37.6
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 5.9e-17 92.4 144 40.3
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 8.6e-16 88.6 100 50.0
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.1e-15 88.2 126 42.1
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.5e-15 87.0 180 36.7
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 2.5e-15 87.0 281 30.2
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 3.3e-15 86.7 300 28.7
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 7.3e-15 85.5 180 36.7
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.6e-14 84.3 150 41.3
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 8.0e-14 82.0 237 28.3
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 8.9e-13 78.6 181 32.6
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 9.8e-12 75.1 70 58.6
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.4e-10 71.2 96 43.8
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.4e-10 71.2 278 32.7
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.6e-09 67.8 74 50.0
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 2.0e-09 67.4 304 27.0
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.3e-08 64.7 70 55.7


User provided reference genes

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