Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4517 Erigeron canadensis HOM05D005101 ORTHO05D001271 0.0e+00 1500.3 878 100.0
ECA232G4886 Erigeron canadensis HOM05D005101 ORTHO05D001271 1.6e-302 1042.7 798 78.2
HanXRQChr13g0388431 Helianthus annuus HOM05D005101 ORTHO05D001271 1.6e-36 159.1 229 42.8
Lsat_1_v5_gn_8_25240 Lactuca sativa HOM05D005101 ORTHO05D001271 2.5e-34 151.8 226 42.5
ECA233G5568 Erigeron canadensis HOM05D005101 ORTHO05D001271 5.6e-34 150.6 245 42.0
HanXRQChr07g0204251 Helianthus annuus HOM05D005101 ORTHO05D001271 7.3e-34 150.2 220 42.3
Dinv23351 Davidia involucrata HOM05D005101 ORTHO05D001271 3.8e-30 137.9 240 40.0
Oeu059862.1 Olea europaea HOM05D005101 ORTHO05D001271 3.2e-29 134.8 223 40.4
Sed0027880 Sechium edule HOM05D005101 ORTHO05D001271 4.6e-28 131.0 244 37.7
QL02p016087 Quercus lobata HOM05D005101 ORTHO05D001271 6.0e-28 130.6 315 33.7
Oeu064738.2 Olea europaea HOM05D005101 ORTHO05D001271 7.9e-28 130.2 513 28.1
Lj4C813T13 Lonicera japonica HOM05D005101 ORTHO05D001271 1.3e-27 129.4 268 35.8
TAR628G1111 Trochodendron aralioides HOM05D005101 ORTHO05D001271 2.3e-27 128.6 214 38.3
GSVIVG01013451001 Vitis vinifera HOM05D005101 ORTHO05D001271 3.9e-27 127.9 217 38.2
Cc10_g00130 Coffea canephora HOM05D005101 ORTHO05D001271 1.1e-26 126.3 309 34.6
Hma1.2p1_0914F.1_g236180 Hydrangea macrophylla HOM05D005101 ORTHO05D001271 1.5e-26 125.9 403 31.5
Prupe.5G002400 Prunus persica HOM05D005101 ORTHO05D001271 1.5e-26 125.9 269 33.8
HanXRQChr08g0216541 Helianthus annuus HOM05D005101 ORTHO05D001271 2.5e-26 125.2 253 37.2
Sp1g18670 Schrenkiella parvula HOM05D005101 ORTHO05D001271 5.6e-26 124.0 398 29.4
CsaV3_4G037750 Cucumis sativus L. HOM05D005101 ORTHO05D001271 9.6e-26 123.2 320 33.8
Atru.chr13.27 Acer truncatum HOM05D005101 ORTHO05D001271 1.3e-25 122.9 224 37.5
SalBow7G2128 Salvia bowleyana HOM05D005101 ORTHO05D001271 1.3e-25 122.9 407 29.0
Cpa.g.sc36.107 Carica papaya HOM05D005101 ORTHO05D001271 1.6e-25 122.5 228 36.0
MSTRG.24898 Avicennia marina HOM05D005101 ORTHO05D001271 2.1e-25 122.1 220 37.3
BcaC05g26005 Brassica carinata HOM05D005101 ORTHO05D001271 2.1e-25 122.1 401 29.2
BolC5t30665H Brassica oleracea HOM05D005101 ORTHO05D001271 2.1e-25 122.1 401 29.2
MD06G1001600 Malus domestica HOM05D005101 ORTHO05D001271 2.1e-25 122.1 213 37.1
Ciclev10000062m.g Citrus clementina HOM05D005101 ORTHO05D001271 3.7e-25 121.3 237 37.1
A06p17010 Brassica napus HOM05D005101 ORTHO05D001271 4.8e-25 120.9 396 28.5
BraA06t24808Z Brassica rapa HOM05D005101 ORTHO05D001271 4.8e-25 120.9 396 28.5
C05p19640 Brassica napus HOM05D005101 ORTHO05D001271 6.2e-25 120.6 401 28.9
BcaB07g32090 Brassica carinata HOM05D005101 ORTHO05D001271 1.1e-24 119.8 371 28.6
CiPaw.08G078400 Carya illinoinensis HOM05D005101 ORTHO05D001271 1.8e-24 119.0 253 36.4
vmacro04431 Vaccinium macrocarpon HOM05D005101 ORTHO05D001271 1.8e-24 119.0 226 38.5
Potri.006G191500 Populus trichocarpa HOM05D005101 ORTHO05D001271 4.0e-24 117.9 226 36.7
THA.LOC104812021 Tarenaya hassleriana HOM05D005101 ORTHO05D001271 4.0e-24 117.9 220 35.9
PGR031G3180 Punica granatum HOM05D005101 ORTHO05D001271 1.2e-23 116.3 338 30.5
Sc22g0001420 Simmondsia chinensis HOM05D005101 ORTHO05D001271 1.2e-23 116.3 217 35.5
TAR381G0675 Trochodendron aralioides HOM05D005101 ORTHO05D001271 1.2e-23 116.3 285 33.7
Migut.C00341 Erythranthe guttata HOM05D005101 ORTHO05D001271 2.6e-23 115.2 288 31.2
Oeu030369.3 Olea europaea HOM05D005101 ORTHO05D001271 4.5e-23 114.4 219 35.6
Peaxi162Scf00205g01431 Petunia axillaris HOM05D005101 ORTHO05D001271 4.5e-23 114.4 252 35.7
THA.LOC104813728 Tarenaya hassleriana HOM05D005101 ORTHO05D001271 5.8e-23 114.0 308 29.2
Aa31LG7G5150 Aethionema arabicum HOM05D005101 ORTHO05D001271 7.6e-23 113.6 392 29.1
CSS0024940 Camellia sinensis var. sinensis HOM05D005101 ORTHO05D001271 1.0e-22 113.2 220 39.1
CiPaw.07G130900 Carya illinoinensis HOM05D005101 ORTHO05D001271 1.0e-22 113.2 382 29.8
Nitab4.5_0002112g0140 Nicotiana tabacum HOM05D005101 ORTHO05D001271 1.3e-22 112.8 217 37.3
Thhalv10006715m.g Eutrema salsugineum HOM05D005101 ORTHO05D001271 2.9e-22 111.7 367 31.3
Carub.0001s2044 Capsella rubella HOM05D005101 ORTHO05D001271 3.8e-22 111.3 469 26.2
MELO3C017068.2 Cucumis melo HOM05D005101 ORTHO05D001271 3.8e-22 111.3 338 30.8
Gohir.A01G080000 Gossypium hirsutum HOM05D005101 ORTHO05D001271 8.4e-22 110.2 388 29.6
TAR376G0758 Trochodendron aralioides HOM05D005101 ORTHO05D001271 8.4e-22 110.2 379 28.0
SGA_v2.0_scaffold26G11270 Striga asiatica HOM05D005101 ORTHO05D001271 1.1e-21 109.8 413 27.6
CAN.G610.9 Capsicum annuum HOM05D005101 ORTHO05D001271 1.4e-21 109.4 389 29.3
Thecc.07G035700 Theobroma cacao HOM05D005101 ORTHO05D001271 1.4e-21 109.4 209 37.3
FAN13G2092 Fragaria x ananassa HOM05D005101 ORTHO05D001271 1.9e-21 109.0 213 36.6
CANSAT64G2160 Cannabis sativa HOM05D005101 ORTHO05D001271 2.5e-21 108.6 316 28.5
Lj2g0011718 Lotus japonicus HOM05D005101 ORTHO05D001271 3.2e-21 108.2 248 34.3
FvH4_5g26490 Fragaria vesca HOM05D005101 ORTHO05D001271 4.2e-21 107.8 213 36.2
FAN18G2527 Fragaria x ananassa HOM05D005101 ORTHO05D001271 4.2e-21 107.8 213 36.2
Dinv05511 Davidia involucrata HOM05D005101 ORTHO05D001271 5.5e-21 107.5 157 44.6
AT1G20970 Arabidopsis thaliana HOM05D005101 ORTHO05D001271 7.1e-21 107.1 429 25.4
Actinidia37901 Actinidia chinensis HOM05D005101 ORTHO05D001271 9.3e-21 106.7 227 34.8
Gohir.D01G067200 Gossypium hirsutum HOM05D005101 ORTHO05D001271 1.6e-20 105.9 385 29.4
FAN04G0351 Fragaria x ananassa HOM05D005101 ORTHO05D001271 2.1e-20 105.5 213 35.2
unitig_8.g4908 Utricularia gibba HOM05D005101 ORTHO05D001271 2.1e-20 105.5 232 32.3
FAN08G1478 Fragaria x ananassa HOM05D005101 ORTHO05D001271 3.5e-20 104.8 213 35.7
Nitab4.5_0000694g0200 Nicotiana tabacum HOM05D005101 ORTHO05D001271 4.6e-20 104.4 393 28.8
unitig_32.g11138 Utricularia gibba HOM05D005101 ORTHO05D001271 6.0e-20 104.0 220 34.5
CARHR021430 Cardamine hirsuta HOM05D005101 ORTHO05D001271 7.9e-20 103.6 330 29.4
Sabra06G0146700 Salix brachista HOM05D005101 ORTHO05D001271 7.9e-20 103.6 382 27.7
Migut.C00640 Erythranthe guttata HOM05D005101 ORTHO05D001271 1.3e-19 102.8 381 28.9
AUR62018772 Chenopodium quinoa HOM05D005101 ORTHO05D001271 1.8e-19 102.4 265 32.8
AL1G34040 Arabidopsis lyrata HOM05D005101 ORTHO05D001271 2.3e-19 102.1 484 26.0
Hund14431 Selenicereus undatus HOM05D005101 ORTHO05D001271 2.3e-19 102.1 262 29.8
Phvul.003G008900 Phaseolus vulgaris HOM05D005101 ORTHO05D001271 5.1e-19 100.9 289 30.8
TPR.G22374 Trifolium pratense HOM05D005101 ORTHO05D001271 5.1e-19 100.9 289 31.8
Psat6g132160 Pisum sativum HOM05D005101 ORTHO05D001271 6.7e-19 100.5 261 33.0
Gorai.002G089100 Gossypium raimondii HOM05D005101 ORTHO05D001271 8.7e-19 100.1 386 29.0
Duzib268G0010 Durio zibethinus HOM05D005101 ORTHO05D001271 1.5e-18 99.4 399 28.1
TWI56G0322 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 1.9e-18 99.0 348 29.6
Cfa014159 Carpinus fangiana HOM05D005101 ORTHO05D001271 5.7e-18 97.4 353 28.6
Nn5g31073 Nelumbo nucifera HOM05D005101 ORTHO05D001271 9.6e-18 96.7 223 33.2
PSO675G4128 Papaver somniferum HOM05D005101 ORTHO05D001271 1.3e-17 96.3 244 29.1
Haze_22881 Corylus avellana HOM05D005101 ORTHO05D001271 2.8e-17 95.1 346 28.3
AUR62007227 Chenopodium quinoa HOM05D005101 ORTHO05D001271 3.7e-17 94.7 270 31.5
Glyma.20G006500 Glycine max HOM05D005101 ORTHO05D001271 1.1e-16 93.2 271 31.7
Sopen05g004540 Solanum pennellii HOM05D005101 ORTHO05D001271 1.8e-16 92.4 503 25.4
Actinidia33602 Actinidia chinensis HOM05D005101 ORTHO05D001271 1.5e-15 89.4 325 28.6
Lalb_Chr04g0258871 Lupinus albus HOM05D005101 ORTHO05D001271 2.0e-15 89.0 245 29.8
Ca_25723_v3 Cicer arietinum L. HOM05D005101 ORTHO05D001271 2.6e-15 88.6 214 33.6
TWI36G1399 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 5.8e-15 87.4 352 27.6
Gohir.A04G015650 Gossypium hirsutum HOM05D005101 ORTHO05D001271 7.6e-15 87.0 355 28.2
Glyma.07G159600 Glycine max HOM05D005101 ORTHO05D001271 1.3e-14 86.3 356 27.2
Sc07g0008820 Simmondsia chinensis HOM05D005101 ORTHO05D001271 1.3e-14 86.3 214 32.2
EL10Ac5g12200 Beta vulgaris HOM05D005101 ORTHO05D001271 2.2e-14 85.5 429 26.8
Gorai.009G438800 Gossypium raimondii HOM05D005101 ORTHO05D001271 2.9e-14 85.1 215 33.0
Gohir.D05G370650 Gossypium hirsutum HOM05D005101 ORTHO05D001271 3.8e-14 84.7 213 33.8
Gorai.009G439100 Gossypium raimondii HOM05D005101 ORTHO05D001271 3.8e-14 84.7 213 33.3
RcHm_v2.0_Chr7g0217401 Rosa chinensis HOM05D005101 ORTHO05D001271 4.9e-14 84.3 213 32.4
Rhsim07G0258200 Rhododendron simsii HOM05D005101 ORTHO05D001271 1.1e-13 83.2 223 31.8
Aqoxy6G03044 Aquilegia oxysepala HOM05D005101 ORTHO05D001271 1.4e-13 82.8 243 28.8
ECA232G0026 Erigeron canadensis HOM05D005101 ORTHO05D023322 1.9e-13 82.4 258 28.7
PSO541G3235 Papaver somniferum HOM05D005101 ORTHO05D001271 9.3e-13 80.1 214 29.0
DCAR_013950 Daucus carota HOM05D005101 ORTHO05D001271 1.2e-12 79.7 217 30.9
Ah.07g200000 Amaranthus hybridus HOM05D005101 ORTHO05D001271 2.1e-12 79.0 284 27.8
Lalb_Chr17g0338131 Lupinus albus HOM05D005101 ORTHO05D001271 2.1e-12 79.0 214 30.4
MBI04_g11526_MAGBIO Magnolia biondii HOM05D005101 ORTHO05D001271 3.5e-12 78.2 218 29.8
Lalb_Chr10g0095281 Lupinus albus HOM05D005101 ORTHO05D001271 1.0e-11 76.6 373 25.7
DCAR_017623 Daucus carota HOM05D005101 ORTHO05D001271 1.8e-11 75.9 223 30.0
Medtr1g035040 Medicago truncatula HOM05D005101 ORTHO05D001271 1.9e-10 72.4 250 26.4
Zm00001eb102050 Zea mays HOM05D005101 ORTHO05D001271 2.5e-10 72.0 236 29.7
Lsat_1_v5_gn_9_48100 Lactuca sativa HOM05D005101 ORTHO05D001271 2.8e-09 68.6 484 24.8
CDE10G1108 Ceratophyllum demersum HOM05D041590 ORTHO05D043859 3.7e-09 68.2 336 27.1
Manes.05G129900 Manihot esculenta HOM05D005101 ORTHO05D001271 4.8e-09 67.8 397 22.9
Gohir.D05G370550 Gossypium hirsutum HOM05D005101 ORTHO05D001271 1.4e-08 66.2 205 29.8
HPP92_015728 Vanilla planifolia HOM05D005101 ORTHO05D001271 1.2e-07 63.2 223 26.0


User provided reference genes

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