Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.9e-226 788.9 413 100.0
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 1.5e-98 364.0 391 55.5
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 9.6e-93 344.7 381 54.9
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.8e-62 244.2 435 42.3
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.8e-62 244.2 441 42.2
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 3.7e-60 236.5 401 41.4
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 8.5e-57 225.3 403 40.7
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.5e-56 223.8 434 39.4
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 4.2e-56 223.0 487 38.2
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 9.3e-56 221.9 496 37.7
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 9.3e-56 221.9 496 37.7
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 9.3e-56 221.9 403 40.7
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.6e-55 221.1 431 40.4
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 2.7e-55 220.3 467 38.3
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 4.6e-55 219.5 442 37.1
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 6.7e-54 215.7 490 36.5
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 1.9e-53 214.2 458 37.3
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.5e-53 213.8 471 37.6
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 2.5e-53 213.8 471 37.6
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 7.4e-53 212.2 429 37.5
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 2.2e-52 210.7 402 39.3
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 2.8e-52 210.3 468 37.0
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 3.7e-52 209.9 417 39.6
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 8.2e-52 208.8 448 37.3
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 1.1e-51 208.4 255 51.0
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 1.8e-51 207.6 381 42.3
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 3.1e-51 206.8 461 36.2
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 6.9e-51 205.7 445 36.2
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.5e-50 204.5 475 36.6
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 1.5e-50 204.5 217 54.4
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 1.5e-50 204.5 394 40.6
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 1.0e-49 201.8 445 38.7
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 1.3e-49 201.4 457 36.5
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.7e-49 201.1 446 37.9
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 1.7e-49 201.1 416 39.2
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.7e-49 201.1 423 38.5
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.2e-49 200.7 447 39.1
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.0e-49 199.5 447 37.4
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.5e-49 199.1 447 37.6
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 8.5e-49 198.7 462 36.8
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.4e-48 198.0 302 45.0
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.2e-48 196.8 447 37.4
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 7.2e-48 195.7 467 37.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 1.2e-47 194.9 448 37.3
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 1.2e-47 194.9 424 37.3
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 1.6e-47 194.5 397 38.8
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 3.6e-47 193.4 421 37.8
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 4.6e-47 193.0 458 36.5
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.6e-47 193.0 365 41.1
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 4.6e-47 193.0 403 38.2
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 4.6e-47 193.0 378 40.2
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 1.0e-46 191.8 386 37.0
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.0e-46 191.8 272 44.1
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 3.0e-46 190.3 294 41.5
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 5.1e-46 189.5 272 43.0
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 8.8e-46 188.7 266 45.1
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 1.1e-45 188.3 294 40.5
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 1.1e-45 188.3 369 39.3
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 2.0e-45 187.6 399 37.6
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.3e-44 184.9 444 36.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 8.2e-44 182.2 240 48.8
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 3.1e-43 180.3 455 34.9
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 6.9e-43 179.1 456 33.3
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 1.2e-42 178.3 468 35.7
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 2.6e-42 177.2 423 37.4
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 3.4e-42 176.8 418 35.2
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 4.5e-42 176.4 354 37.9
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 4.5e-42 176.4 423 34.3
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 4.5e-42 176.4 456 34.9
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.0e-41 175.3 233 46.4
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 2.9e-41 173.7 357 38.7
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 5.0e-41 172.9 431 36.7
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 6.5e-41 172.6 423 37.6
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 3.2e-40 170.2 408 37.0
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 5.5e-40 169.5 501 33.9
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 2.7e-39 167.2 528 32.2
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 3.6e-39 166.8 438 34.9
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.8e-38 164.5 426 34.0
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 8.8e-38 162.2 413 34.4
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 8.8e-38 162.2 413 34.4
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 8.8e-38 162.2 272 43.8
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 7.4e-37 159.1 433 34.6
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 3.7e-36 156.8 378 37.6
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 3.1e-35 153.7 432 33.6
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 4.1e-35 153.3 326 38.0
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 5.3e-35 152.9 435 33.8
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 7.0e-35 152.5 386 38.3
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 1.2e-34 151.8 355 36.9
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 2.6e-34 150.6 234 38.9
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 7.7e-34 149.1 334 35.9
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 1.7e-33 147.9 250 41.6
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 1.5e-32 144.8 318 35.8
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.5e-32 144.1 463 30.2
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 2.5e-32 144.1 322 37.9
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 9.4e-32 142.1 381 35.7
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 2.1e-31 141.0 279 39.8
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 1.0e-30 138.7 192 47.4
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 3.7e-28 130.2 179 48.0
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 2.9e-25 120.6 139 51.1
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 2.9e-25 120.6 433 29.8
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 7.2e-24 115.9 303 32.7
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.4e-22 111.7 132 53.0
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 3.7e-20 103.6 515 28.9
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 3.5e-18 97.1 253 33.2
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 2.2e-17 94.4 339 29.5
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 1.6e-15 88.2 116 46.6
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 4.0e-14 83.6 235 33.2
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 4.0e-14 83.6 169 41.4
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 4.1e-11 73.6 91 44.0
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 1.6e-10 71.6 135 39.3
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 6.6e-09 66.2 128 35.9
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 2.1e-07 61.2 40 75.0


User provided reference genes

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