Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 0.0e+00 1934.8 975 100.0
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 4.4e-181 639.4 516 64.9
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 3.4e-165 586.6 1029 37.1
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.8e-159 567.0 514 56.4
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 4.1e-142 510.0 501 52.5
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 4.5e-133 479.9 510 50.0
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.2e-132 477.6 513 49.1
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 3.9e-129 466.8 412 61.4
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 5.7e-128 463.0 514 50.6
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 5.7e-128 463.0 513 49.7
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 7.4e-128 462.6 515 50.1
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 2.4e-126 457.6 512 48.8
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 4.5e-125 453.4 510 48.6
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 7.7e-125 452.6 517 48.4
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 8.5e-124 449.1 501 48.7
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 2.5e-123 447.6 535 48.0
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 7.2e-123 446.0 510 47.6
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 1.2e-122 445.3 505 48.3
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.8e-121 441.4 513 48.3
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.1e-120 438.7 485 50.5
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 3.3e-120 437.2 483 48.9
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 7.4e-120 436.0 509 48.3
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 4.8e-119 433.3 510 46.9
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 6.3e-119 433.0 516 48.3
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 3.1e-118 430.6 522 46.9
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 5.3e-118 429.9 511 46.0
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 6.5e-116 422.9 500 47.4
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.6e-114 417.2 478 49.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 3.6e-114 417.2 508 46.3
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.8e-113 414.8 508 46.1
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 5.2e-113 413.3 510 45.7
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.5e-112 411.8 515 47.4
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 2.0e-112 411.4 519 47.6
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.7e-111 408.3 509 45.4
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 4.8e-111 406.8 645 39.2
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 1.4e-110 405.2 506 45.7
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 1.4e-110 405.2 511 44.8
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 2.4e-110 404.4 516 45.3
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 2.4e-110 404.4 511 45.4
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 1.6e-109 401.7 513 45.6
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.0e-109 401.4 516 44.8
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 4.5e-109 400.2 419 50.1
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 5.9e-109 399.8 515 44.7
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 1.3e-108 398.7 514 45.3
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 3.8e-108 397.1 508 43.7
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 8.5e-108 396.0 486 46.5
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 2.5e-107 394.4 513 44.4
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 3.2e-107 394.0 508 44.7
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 3.2e-107 394.0 508 45.7
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 7.5e-104 382.9 505 42.8
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.8e-102 378.3 508 43.1
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 9.1e-102 375.9 474 46.6
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.2e-101 375.6 508 43.1
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 2.0e-101 374.8 462 46.8
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 3.5e-101 374.0 527 43.6
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 4.5e-101 373.6 511 41.9
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 5.9e-101 373.2 506 44.3
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.7e-100 371.7 503 43.1
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 2.3e-100 371.3 517 43.1
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 3.8e-100 370.5 509 43.4
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 5.0e-100 370.2 311 65.0
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.1e-99 369.0 525 42.5
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 2.5e-99 367.9 490 44.1
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 9.5e-99 365.9 520 43.7
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 4.7e-98 363.6 458 43.7
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 6.1e-98 363.2 521 43.2
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 8.0e-98 362.8 521 42.6
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.4e-97 362.1 513 43.7
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 4.0e-97 360.5 415 47.5
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 5.2e-97 360.1 522 42.9
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.2e-96 359.0 357 54.1
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 7.5e-96 356.3 479 42.8
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 9.8e-96 355.9 449 46.8
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 2.7e-93 347.8 672 36.8
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 2.5e-91 341.3 512 39.6
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.6e-90 337.4 371 49.1
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 1.8e-89 335.1 374 48.4
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 3.0e-89 334.3 449 45.2
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 3.0e-89 334.3 481 42.0
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 6.8e-89 333.2 511 39.5
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 3.4e-88 330.9 513 40.2
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.7e-85 321.2 505 37.6
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 1.7e-79 302.0 879 28.9
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 3.5e-77 294.3 410 43.9
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 6.0e-77 293.5 410 41.2
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 2.3e-76 291.6 526 35.4
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 4.1e-70 270.8 446 38.8
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.5e-67 261.5 334 45.5
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.1e-57 229.6 266 48.9
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 1.2e-56 226.1 549 28.6
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 2.9e-55 221.5 290 42.8
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 2.4e-54 218.4 312 41.3
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 3.9e-52 211.1 413 34.6
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 8.7e-52 209.9 315 39.0
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.9e-44 184.5 286 41.3
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 8.7e-44 183.3 337 38.0
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 1.6e-42 179.1 516 26.9
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.5e-40 172.6 148 58.8
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 5.1e-36 157.5 163 50.3
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 2.0e-32 145.6 579 24.7
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 5.8e-32 144.1 126 57.9
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 7.6e-32 143.7 284 34.2
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 1.6e-29 136.0 268 34.3
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 6.0e-29 134.0 102 56.9
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.6e-26 125.9 107 57.9
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 2.2e-26 125.6 256 30.9
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 8.2e-26 123.6 140 47.1
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 6.9e-25 120.6 524 25.0
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 2.0e-24 119.0 206 37.4
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 5.0e-23 114.4 142 45.8
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.9e-20 104.8 135 41.5
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 4.1e-17 94.7 178 37.1
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 3.0e-12 78.6 137 35.8
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 3.9e-12 78.2 140 37.9
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 3.9e-12 78.2 140 37.9
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 5.1e-12 77.8 260 29.2
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 1.3e-10 73.2 129 36.4
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 2.2e-10 72.4 90 47.8
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 1.0e-07 63.5 79 41.8
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 1.0e-07 63.5 79 41.8
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 1.0e-07 63.5 79 41.8
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 3.8e-07 61.6 63 44.4
Atru.chr1.2967 Acer truncatum HOM05D005725 ORTHO05D007531 8.5e-07 60.5 87 47.1


User provided reference genes

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