Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 3.0e-145 518.5 254 100.0
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.0e-117 426.0 266 80.1
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 1.7e-116 422.9 254 82.7
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 6.1e-82 308.1 256 59.4
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.6e-77 293.5 257 57.2
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 3.5e-77 292.4 219 60.7
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 4.5e-77 292.0 237 61.6
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.2e-76 289.7 239 60.3
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 2.2e-76 289.7 270 53.3
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 6.5e-76 288.1 231 62.3
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.1e-75 287.3 213 65.7
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 3.2e-75 285.8 254 57.1
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 4.2e-75 285.4 245 59.2
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 4.2e-75 285.4 227 59.0
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.5e-75 285.0 231 61.5
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 2.3e-73 279.6 212 60.4
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.6e-72 276.2 225 58.2
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 3.4e-72 275.8 231 58.0
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 4.4e-72 275.4 259 54.8
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 5.7e-72 275.0 220 57.3
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 5.7e-72 275.0 258 52.7
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 7.5e-72 274.6 246 56.1
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 7.5e-72 274.6 172 73.8
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 3.7e-71 272.3 161 77.0
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 3.7e-71 272.3 256 55.1
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 6.3e-71 271.6 224 62.9
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 8.3e-71 271.2 212 61.8
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 8.3e-71 271.2 161 76.4
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.4e-70 270.4 201 60.7
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.8e-70 270.0 257 52.9
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.8e-70 270.0 256 55.9
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.4e-70 269.6 194 64.4
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 5.4e-70 268.5 246 56.5
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 9.1e-70 267.7 257 54.9
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 9.1e-70 267.7 210 60.0
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 3.5e-69 265.8 184 66.8
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 5.9e-69 265.0 169 72.8
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 1.7e-68 263.5 198 62.6
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 2.2e-68 263.1 253 52.6
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 2.2e-68 263.1 200 62.0
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.9e-68 262.7 205 61.5
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.9e-68 262.7 229 56.8
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 2.9e-68 262.7 213 60.6
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.9e-68 262.7 259 54.8
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 3.8e-68 262.3 262 49.6
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.8e-68 262.3 194 60.8
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 3.8e-68 262.3 194 60.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 5.0e-68 261.9 194 60.3
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 5.0e-68 261.9 231 56.7
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 1.5e-67 260.4 199 60.3
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 2.5e-67 259.6 263 53.2
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 4.2e-67 258.8 195 59.5
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 4.2e-67 258.8 242 52.9
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 7.2e-67 258.1 248 52.4
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 7.2e-67 258.1 202 59.4
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 7.2e-67 258.1 201 60.7
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 7.2e-67 258.1 211 57.8
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 7.2e-67 258.1 228 56.1
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 9.4e-67 257.7 248 51.6
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 9.4e-67 257.7 258 53.1
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 9.4e-67 257.7 184 65.8
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 9.4e-67 257.7 187 64.7
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.2e-66 257.3 193 61.1
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 2.1e-66 256.5 213 57.3
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.7e-66 256.1 195 60.5
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 3.6e-66 255.8 249 52.2
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.6e-66 255.8 196 62.8
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 3.6e-66 255.8 196 61.2
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.0e-65 254.2 247 51.8
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.4e-65 253.8 194 59.8
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.5e-64 250.4 185 61.1
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.5e-64 250.4 183 62.8
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.0e-64 250.0 161 67.7
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 5.7e-64 248.4 240 52.5
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.7e-63 246.9 245 50.2
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.2e-63 246.5 207 58.0
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.2e-63 246.5 210 55.7
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.7e-63 245.7 163 66.9
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.7e-63 245.7 196 61.2
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 4.9e-63 245.4 240 51.7
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 4.9e-63 245.4 195 58.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.9e-63 245.4 212 55.2
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 4.9e-63 245.4 193 62.2
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 1.4e-62 243.8 212 54.7
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.8e-62 243.4 212 54.2
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 7.0e-62 241.5 213 57.3
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.6e-61 240.4 297 47.1
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.0e-61 240.0 214 56.5
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 5.6e-59 231.9 223 49.8
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 7.3e-59 231.5 243 48.6
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 9.5e-59 231.1 187 61.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-58 230.7 264 49.6
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 2.1e-58 229.9 196 57.7
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.4e-54 217.2 191 55.5
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.8e-54 216.9 186 59.7
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.8e-54 216.9 221 51.1
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 7.0e-54 214.9 311 39.2
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 2.0e-53 213.4 198 49.5
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.9e-51 206.8 125 75.2
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 2.6e-48 196.4 161 55.3
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 3.2e-46 189.5 177 53.1
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 4.4e-40 169.1 193 43.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 2.9e-39 166.4 134 60.4
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.0e-36 157.9 147 55.8
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.4e-33 147.5 163 42.9
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.6e-29 132.5 105 62.9
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 7.3e-27 125.2 90 71.1
HanXRQChr07g0197211 Helianthus annuus HOM05D001581 ORTHO05D001479 2.6e-24 116.7 88 71.6
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 2.2e-23 113.6 215 34.9
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.2e-23 113.6 163 40.5
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-22 111.3 114 54.4
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 4.2e-22 109.4 66 69.7
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 7.1e-22 108.6 197 32.5
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 8.1e-10 68.6 103 38.8
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 7.6e-08 62.0 50 52.0
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 3.2e-06 56.6 32 71.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 3.2e-06 56.6 32 71.9


User provided reference genes

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