Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 5.6e-103 377.5 175 100.0
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 1.7e-99 365.9 175 95.4
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 3.8e-99 364.8 173 95.4
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 5.1e-96 354.4 175 92.0
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 5.1e-96 354.4 175 92.0
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 5.1e-96 354.4 175 92.0
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 1.9e-95 352.4 174 91.4
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 1.9e-95 352.4 175 90.9
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 1.9e-95 352.4 175 90.3
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 2.5e-95 352.1 175 90.3
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 3.3e-95 351.7 175 91.4
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 3.3e-95 351.7 175 91.4
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 3.3e-95 351.7 175 92.0
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 3.3e-95 351.7 175 92.0
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 3.3e-95 351.7 175 90.9
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 4.3e-95 351.3 175 90.3
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 4.3e-95 351.3 173 92.5
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 4.3e-95 351.3 175 90.3
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 5.7e-95 350.9 175 90.9
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 7.4e-95 350.5 175 90.9
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 7.4e-95 350.5 175 90.9
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 9.6e-95 350.1 175 90.3
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 1.3e-94 349.7 175 92.0
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.6e-94 349.4 175 90.3
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 1.6e-94 349.4 175 90.3
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.6e-94 349.4 175 89.7
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 2.8e-94 348.6 175 90.9
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 2.8e-94 348.6 175 90.3
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 2.8e-94 348.6 175 90.3
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 2.8e-94 348.6 175 90.3
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 2.8e-94 348.6 175 89.1
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 3.7e-94 348.2 175 90.3
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 3.7e-94 348.2 175 89.7
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 3.7e-94 348.2 174 89.7
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 3.7e-94 348.2 174 89.7
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 3.7e-94 348.2 173 89.6
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 4.8e-94 347.8 175 89.1
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 4.8e-94 347.8 172 90.7
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 4.8e-94 347.8 175 89.1
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 4.8e-94 347.8 175 89.7
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 4.8e-94 347.8 173 90.8
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 4.8e-94 347.8 175 89.7
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 6.2e-94 347.4 175 89.1
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 6.2e-94 347.4 175 89.7
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 8.2e-94 347.1 175 89.1
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 8.2e-94 347.1 172 90.7
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 8.2e-94 347.1 175 89.7
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 8.2e-94 347.1 175 89.7
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 8.2e-94 347.1 175 90.3
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 1.1e-93 346.7 175 89.1
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 1.4e-93 346.3 175 90.3
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 1.4e-93 346.3 175 88.6
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 1.8e-93 345.9 175 88.6
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.8e-93 345.9 175 89.1
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 1.8e-93 345.9 167 91.6
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 2.4e-93 345.5 175 89.7
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 3.1e-93 345.1 174 88.5
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 3.1e-93 345.1 175 89.1
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 3.1e-93 345.1 174 87.9
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 4.0e-93 344.7 175 88.0
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 4.0e-93 344.7 175 89.1
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 5.3e-93 344.4 175 88.6
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 5.3e-93 344.4 175 88.0
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 5.3e-93 344.4 175 87.4
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 5.3e-93 344.4 175 88.6
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 5.3e-93 344.4 175 88.6
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 5.3e-93 344.4 175 89.1
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 6.9e-93 344.0 175 88.6
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 6.9e-93 344.0 175 88.6
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 6.9e-93 344.0 175 88.6
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 6.9e-93 344.0 175 87.4
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 6.9e-93 344.0 175 88.6
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 6.9e-93 344.0 175 88.6
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 9.0e-93 343.6 175 89.1
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 9.0e-93 343.6 175 88.0
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 9.0e-93 343.6 175 88.0
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.2e-92 343.2 175 86.3
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.0
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.5e-92 342.8 172 90.1
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.5e-92 342.8 172 90.1
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 1.5e-92 342.8 172 89.5
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.6
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.6
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 88.6
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 2.0e-92 342.4 173 91.3
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 2.0e-92 342.4 175 87.4
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 2.6e-92 342.0 175 87.4
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 3.4e-92 341.7 175 87.4
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 4.5e-92 341.3 175 86.9
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 4.5e-92 341.3 175 86.9
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 4.5e-92 341.3 175 87.4
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 4.5e-92 341.3 175 87.4
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 5.8e-92 340.9 175 88.0
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 7.6e-92 340.5 175 87.4
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 7.6e-92 340.5 175 88.0
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 1.3e-91 339.7 175 87.4
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 1.7e-91 339.3 174 88.5
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 2.9e-91 338.6 175 87.4
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 3.8e-91 338.2 175 86.9
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 7.1e-90 334.0 175 86.9
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 1.6e-89 332.8 174 87.4
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 1.8e-88 329.3 175 84.6
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 3.3e-87 325.1 244 66.8
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 9.0e-85 317.0 175 80.0
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 1.0e-83 313.5 173 79.8
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 2.2e-83 312.4 173 78.6
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 3.8e-83 311.6 169 82.8
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 5.1e-80 301.2 173 77.5
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 3.3e-79 298.5 171 77.2
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 1.7e-78 296.2 150 87.3
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 6.3e-78 294.3 181 79.0
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 2.0e-76 289.3 175 73.1
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 2.1e-73 279.3 165 71.5
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 5.1e-72 274.6 131 93.9
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 8.2e-70 267.3 131 90.8
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 1.1e-69 266.9 131 89.3
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 4.1e-69 265.0 167 76.6
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 5.0e-67 258.1 164 68.9
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 1.6e-60 236.5 125 84.8
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 4.7e-57 224.9 124 81.5
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 1.8e-56 223.0 112 89.3
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 2.0e-55 219.5 119 83.2
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 9.8e-55 217.2 125 78.4
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 3.7e-54 215.3 114 86.8
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 1.7e-51 206.5 166 54.8
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 3.2e-50 202.2 112 77.7
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 3.0e-48 195.7 104 84.6
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 1.6e-44 183.3 141 64.5
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 6.6e-43 177.9 95 85.3
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 5.4e-37 158.3 87 82.8
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 7.3e-34 147.9 177 49.2
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 1.1e-29 134.0 131 52.7
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 1.2e-28 130.6 114 59.6
Nn5g29750 Nelumbo nucifera HOM05D005492 ORTHO05D006911 5.6e-26 121.7 62 87.1
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 4.1e-21 105.5 115 47.0


User provided reference genes

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