Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 1.5e-121 439.5 214 100.0
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 3.7e-96 355.1 215 81.4
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 1.3e-88 330.1 198 83.3
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 4.4e-73 278.5 219 62.6
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 7.4e-73 277.7 213 64.3
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 4.1e-71 271.9 208 64.9
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 5.3e-71 271.6 190 65.3
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 1.2e-70 270.4 182 68.7
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.6e-70 270.0 177 72.3
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.6e-70 270.0 210 62.4
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 7.7e-70 267.7 191 66.5
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.0e-69 267.3 219 60.3
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 1.3e-69 266.9 199 63.8
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 1.3e-69 266.9 176 71.6
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.3e-69 266.9 216 62.5
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.3e-69 266.9 197 67.5
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 2.9e-69 265.8 210 61.4
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 3.8e-69 265.4 181 68.5
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 5.0e-69 265.0 192 65.6
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 6.5e-69 264.6 205 62.0
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.5e-68 263.5 185 67.6
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.5e-68 263.5 209 61.2
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.9e-68 263.1 181 69.1
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 4.2e-68 261.9 187 67.4
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 4.2e-68 261.9 189 67.2
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 5.5e-68 261.5 203 64.0
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 5.5e-68 261.5 203 64.0
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 7.2e-68 261.2 196 64.8
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.2e-67 260.4 196 63.3
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.2e-67 260.4 185 67.0
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 1.2e-67 260.4 211 63.0
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.2e-67 260.4 227 59.5
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 2.1e-67 259.6 198 62.6
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.6e-67 258.8 206 62.1
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 3.6e-67 258.8 203 62.6
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 4.7e-67 258.5 176 69.9
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 6.1e-67 258.1 187 64.7
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 8.0e-67 257.7 204 61.8
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 8.0e-67 257.7 209 62.2
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.0e-66 257.3 193 63.7
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.4e-66 256.9 187 66.3
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 1.8e-66 256.5 186 67.2
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 2.3e-66 256.1 193 64.8
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 3.0e-66 255.8 181 66.9
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 3.0e-66 255.8 172 69.2
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 3.0e-66 255.8 198 61.6
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 6.7e-66 254.6 203 62.1
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 6.7e-66 254.6 215 59.5
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 8.8e-66 254.2 176 68.8
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 1.5e-65 253.4 191 64.4
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 4.4e-65 251.9 185 63.8
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 5.7e-65 251.5 188 62.8
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 1.7e-64 250.0 174 66.1
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 2.2e-64 249.6 181 66.3
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 2.8e-64 249.2 188 63.8
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 3.7e-64 248.8 201 59.7
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 1.4e-63 246.9 183 65.0
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.8e-63 246.5 183 63.9
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 1.8e-63 246.5 189 63.0
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 2.4e-63 246.1 182 64.8
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 5.3e-63 245.0 190 60.0
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 5.3e-63 245.0 215 58.6
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.2e-62 243.8 193 61.7
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.6e-62 243.4 194 62.9
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 2.7e-62 242.7 165 69.1
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 4.5e-62 241.9 196 61.2
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 2.2e-61 239.6 189 63.5
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 2.9e-61 239.2 175 61.1
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 8.5e-61 237.7 204 59.8
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 8.5e-61 237.7 201 58.2
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 1.9e-60 236.5 201 58.2
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 1.9e-60 236.5 201 58.2
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 3.2e-60 235.7 206 57.3
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 9.4e-60 234.2 200 59.0
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.2e-59 233.8 179 62.6
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 1.2e-59 233.8 192 61.5
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.2e-59 233.8 166 64.5
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 1.2e-59 233.8 177 62.1
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.6e-59 233.4 183 60.1
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 2.7e-59 232.6 177 62.7
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 3.6e-59 232.3 190 59.5
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 3.6e-59 232.3 180 60.0
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 8.0e-59 231.1 198 59.1
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 6.8e-58 228.0 166 66.9
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 8.8e-58 227.6 173 60.7
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.2e-57 227.3 177 65.0
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 1.2e-57 227.3 205 57.6
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 1.5e-57 226.9 190 58.4
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 2.0e-57 226.5 190 58.4
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 2.0e-57 226.5 142 70.4
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 5.7e-57 224.9 221 55.7
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 2.2e-56 223.0 155 69.0
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.8e-56 222.6 185 59.5
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 3.7e-56 222.2 145 72.4
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 8.3e-56 221.1 210 57.6
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 2.5e-52 209.5 134 71.6
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 2.5e-52 209.5 179 59.2
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 3.2e-52 209.1 125 74.4
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 4.7e-51 205.3 146 64.4
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 2.3e-50 203.0 134 66.4
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 5.7e-49 198.4 166 57.8
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 2.4e-47 193.0 164 53.0
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 4.1e-47 192.2 132 67.4
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.6e-46 190.3 178 53.9
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.7e-46 189.5 142 67.6
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 1.2e-43 180.6 177 54.2
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 9.8e-41 171.0 111 67.6
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.0e-37 161.0 93 81.7
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.9e-36 156.8 126 54.8
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 2.0e-33 146.7 136 53.7
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.4e-33 146.0 152 48.0
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 2.9e-32 142.9 129 56.6
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 2.9e-32 142.9 129 56.6
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 1.7e-29 133.7 128 46.9
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.0e-29 132.9 93 68.8
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 9.8e-25 117.9 104 51.9
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 2.9e-24 116.3 79 64.6
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.9e-23 113.6 126 47.6
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 1.7e-21 107.1 100 49.0
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.5e-20 103.2 103 51.5
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 7.3e-20 101.7 94 52.1
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.6e-17 91.7 114 36.0
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 6.9e-10 68.6 168 28.6
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 2.0e-09 67.0 44 68.2
Cre03.g208049 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D139805 7.1e-07 58.5 91 37.4


User provided reference genes

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