Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 2.0e-278 961.8 506 100.0
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 1.4e-226 789.6 474 87.8
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 4.9e-224 781.2 504 81.3
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 4.6e-190 668.3 506 68.8
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 4.3e-188 661.8 504 68.8
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 4.3e-188 661.8 499 70.7
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.4e-183 646.7 507 68.0
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 2.7e-182 642.5 514 68.5
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 1.0e-181 640.6 507 67.5
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 1.3e-181 640.2 520 65.4
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 5.1e-181 638.3 498 67.9
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 8.7e-181 637.5 502 67.5
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 2.5e-180 636.0 498 67.7
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 3.3e-180 635.6 502 66.7
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 3.3e-180 635.6 506 66.8
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 4.3e-180 635.2 499 67.7
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 7.4e-180 634.4 502 69.3
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 1.1e-178 630.6 499 67.9
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 3.1e-178 629.0 512 66.4
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 4.1e-178 628.6 506 66.4
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 2.6e-177 625.9 515 67.2
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 7.7e-177 624.4 520 66.5
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 2.2e-176 622.9 501 67.1
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 3.8e-176 622.1 498 67.5
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 3.2e-175 619.0 502 65.5
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 7.2e-175 617.8 505 65.7
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 6.1e-174 614.8 502 65.1
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 6.7e-173 611.3 499 65.3
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 9.7e-172 607.4 506 64.8
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 2.8e-171 605.9 508 64.6
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 3.7e-171 605.5 507 64.7
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 6.3e-171 604.7 504 64.3
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.8e-170 603.2 509 65.0
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 3.1e-170 602.4 505 64.0
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 6.9e-170 601.3 507 64.3
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 6.9e-170 601.3 496 64.3
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 7.7e-169 597.8 507 63.7
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 7.7e-169 597.8 500 64.6
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.0e-168 597.4 510 64.1
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.0e-168 597.4 507 63.5
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 1.3e-168 597.0 506 65.6
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.9e-168 595.9 500 64.2
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 4.2e-167 592.0 498 63.5
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 5.5e-167 591.7 514 63.6
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 7.2e-167 591.3 483 64.6
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 1.6e-166 590.1 503 62.2
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.6e-166 590.1 502 63.3
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 7.9e-166 587.8 503 62.0
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 1.1e-164 583.9 503 62.2
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 7.4e-164 581.3 495 62.6
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 9.7e-164 580.9 498 61.8
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 2.8e-163 579.3 506 61.3
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.4e-162 577.0 571 58.8
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 2.2e-160 569.7 502 61.2
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 2.9e-160 569.3 501 59.9
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 3.8e-160 568.9 500 61.6
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 8.5e-160 567.8 497 61.8
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.5e-159 567.0 500 62.2
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 7.2e-159 564.7 502 61.0
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 9.4e-159 564.3 504 60.7
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 2.7e-158 562.8 504 60.7
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 8.0e-158 561.2 502 62.0
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 6.7e-157 558.1 507 60.7
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 2.6e-156 556.2 504 60.3
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 2.2e-155 553.1 509 61.1
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 4.8e-155 552.0 491 61.3
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 1.8e-154 550.1 443 69.1
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 1.8e-154 550.1 459 66.4
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 5.3e-154 548.5 406 73.2
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 1.6e-153 547.0 522 57.1
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 1.6e-153 547.0 504 60.3
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 1.5e-151 540.4 506 58.7
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 3.6e-150 535.8 467 64.7
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 4.0e-149 532.3 479 63.0
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 8.8e-149 531.2 553 55.7
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 5.9e-145 518.5 507 58.0
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 8.8e-141 504.6 458 60.9
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 1.5e-140 503.8 473 60.0
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 5.7e-140 501.9 454 61.0
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 5.4e-138 495.4 529 53.9
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 6.6e-136 488.4 415 65.1
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.6e-134 483.8 477 58.1
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 5.2e-133 478.8 495 55.6
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 6.8e-133 478.4 435 60.5
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 4.4e-132 475.7 474 56.3
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 6.2e-126 455.3 373 63.8
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 5.8e-116 422.2 331 66.5
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 6.8e-109 398.7 367 61.6
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 2.1e-97 360.5 388 53.1
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 2.5e-95 353.6 509 45.0
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.4e-93 347.8 510 44.7
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 1.9e-90 337.4 285 63.2
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 3.6e-86 323.2 300 60.0
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 1.3e-80 304.7 256 64.5
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 8.4e-75 285.4 238 64.3
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 3.8e-67 260.0 252 57.5
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.6e-65 254.6 215 60.5
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.1e-61 241.9 170 70.6
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 7.7e-60 235.7 151 78.8
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 3.2e-58 230.3 210 58.1
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 1.5e-55 221.5 248 54.0
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 1.3e-51 208.4 179 64.8
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 7.2e-50 202.6 156 65.4
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 3.8e-43 180.3 142 65.5
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 1.6e-41 174.9 149 66.4
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 7.2e-34 149.4 491 29.5
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 3.4e-31 140.6 97 80.4
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 4.8e-30 136.7 105 76.2
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 4.8e-30 136.7 165 49.1
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-28 129.4 105 73.3
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 7.5e-23 112.8 94 62.8
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 9.8e-23 112.5 72 80.6
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 1.6e-20 105.1 86 72.1
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 3.5e-20 104.0 68 69.1
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 5.0e-19 100.1 77 63.6
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.5e-18 98.6 92 57.6
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.2e-14 84.7 59 76.3
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 7.3e-10 69.7 57 61.4
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 7.5e-07 59.7 42 59.5
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 6.4e-06 56.6 90 44.4


User provided reference genes

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