Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.9e-154 549.3 308 100.0
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 5.6e-114 414.8 297 79.5
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.7e-108 396.0 310 72.6
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.5e-90 336.3 309 62.8
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.1e-88 329.3 311 59.8
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 3.1e-88 329.3 310 61.6
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.0e-88 328.9 311 59.8
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.3e-88 328.6 311 59.8
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.2e-87 327.4 308 61.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.0e-87 326.6 311 59.5
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 2.0e-87 326.6 311 61.1
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.6e-87 326.2 305 61.0
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.6e-87 326.2 305 62.6
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.4e-87 325.9 305 61.6
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 3.4e-87 325.9 306 59.8
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.3e-86 323.9 308 59.4
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.3e-86 323.9 307 59.3
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.2e-86 323.2 307 59.3
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.1e-85 320.9 317 58.7
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.1e-85 320.9 310 61.0
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 4.2e-85 318.9 307 60.3
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.2e-84 317.4 318 57.9
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 3.5e-84 315.8 319 57.1
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 7.9e-84 314.7 304 58.9
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.9e-84 314.7 304 59.9
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.3e-83 313.2 308 59.1
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 3.9e-83 312.4 308 59.4
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.9e-83 312.4 308 57.8
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 6.7e-83 311.6 310 59.0
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 8.7e-83 311.2 308 60.4
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 8.7e-83 311.2 252 67.5
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.5e-82 310.5 307 57.0
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.5e-82 309.7 308 61.7
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 5.7e-82 308.5 309 56.3
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 3.7e-81 305.8 320 56.9
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 4.8e-81 305.4 308 58.1
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 8.2e-81 304.7 308 55.5
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-80 303.9 347 53.9
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.8e-80 303.5 308 57.8
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.4e-80 303.1 308 57.5
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.1e-80 302.8 310 55.8
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.1e-80 302.4 308 59.7
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 5.3e-80 302.0 308 56.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 5.3e-80 302.0 305 54.8
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 3.4e-79 299.3 309 53.7
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 3.4e-79 299.3 305 56.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.3e-78 297.4 305 52.8
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.7e-78 297.0 308 55.8
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 2.9e-78 296.2 310 54.5
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.9e-78 296.2 308 55.8
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 2.9e-78 296.2 309 53.7
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 2.9e-78 296.2 306 53.9
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 6.5e-78 295.0 312 55.8
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.9e-77 293.5 307 53.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 4.2e-77 292.4 305 57.0
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.6e-76 288.9 305 52.1
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 7.9e-76 288.1 265 59.6
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.0e-75 287.7 317 52.4
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.0e-75 287.7 308 56.5
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.8e-75 287.0 306 53.6
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.3e-75 286.6 308 53.6
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.3e-75 286.6 308 53.6
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 5.1e-75 285.4 307 52.4
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 8.8e-75 284.6 308 54.2
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 8.8e-75 284.6 314 52.9
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.5e-74 283.9 317 52.7
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.5e-74 283.9 317 52.7
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.5e-74 283.9 317 52.7
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.5e-74 283.9 317 52.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 2.0e-74 283.5 317 53.3
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.3e-74 282.3 316 55.4
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 7.4e-74 281.6 317 52.4
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.7e-73 279.3 309 58.3
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 4.8e-73 278.9 318 52.8
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 6.3e-73 278.5 308 53.9
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.4e-72 277.3 306 51.6
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 3.1e-72 276.2 315 52.1
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 3.1e-72 276.2 317 51.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 5.3e-72 275.4 304 55.6
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 9.1e-72 274.6 309 52.8
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 5.9e-71 271.9 311 54.3
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 7.7e-71 271.6 306 56.2
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.3e-70 270.8 313 51.1
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.2e-70 270.0 305 52.8
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 5.0e-70 268.9 308 56.5
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.4e-69 267.3 308 52.9
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.9e-69 266.9 253 58.9
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 9.4e-69 264.6 305 49.8
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.6e-68 263.8 317 55.5
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.0e-67 261.2 267 53.6
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.5e-66 257.3 309 56.0
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.7e-65 252.7 260 53.5
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 7.2e-61 238.4 305 52.1
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 9.4e-61 238.0 305 52.1
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.0e-59 234.6 207 64.3
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.8e-59 233.8 309 46.9
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 6.7e-59 231.9 320 46.6
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 6.3e-57 225.3 226 55.3
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 4.1e-56 222.6 204 61.8
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 5.3e-56 222.2 271 50.2
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 3.5e-55 219.5 308 49.0
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 4.7e-52 209.1 243 56.0
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.8e-48 197.2 308 46.4
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 5.9e-47 192.2 268 43.3
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.2e-42 177.9 271 43.9
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.5e-42 177.6 294 41.2
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.1e-40 169.9 290 45.2
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 3.5e-39 166.4 284 40.5
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 1.3e-38 164.5 272 38.6
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.6e-36 156.4 135 63.7
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 6.1e-36 155.6 288 37.2
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 4.4e-34 149.4 308 37.7
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 1.3e-33 147.9 188 50.0
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 2.4e-32 143.7 140 56.4
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 2.3e-30 137.1 120 64.2
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.4e-27 127.9 192 48.4
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.7e-25 120.9 120 57.5
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.2e-24 116.7 122 52.5
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 5.4e-24 115.9 143 49.0
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 7.0e-24 115.5 141 53.2
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.2e-23 114.8 178 43.3
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.7e-23 113.6 178 43.3
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.6e-22 109.0 311 31.5
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.5e-21 107.1 159 44.7
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 9.5e-21 105.1 154 42.9
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.4e-19 101.3 96 55.2
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 7.5e-18 95.5 101 52.5
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.1e-14 82.8 61 67.2
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 8.6e-14 82.0 109 50.5
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 6.2e-12 75.9 111 42.3
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.5e-10 71.2 102 49.0


User provided reference genes

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