Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 2.8e-115 418.7 223 100.0
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 7.7e-81 304.3 207 81.6
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 1.5e-79 300.1 205 79.5
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 4.4e-76 288.5 198 79.8
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 1.7e-75 286.6 205 78.5
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 1.8e-69 266.5 214 72.0
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 6.8e-69 264.6 223 67.3
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 2.0e-68 263.1 203 71.4
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 3.4e-68 262.3 207 71.0
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.4e-68 261.9 211 68.7
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 2.9e-67 259.2 197 69.0
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 2.4e-66 256.1 222 67.1
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 7.0e-66 254.6 202 67.3
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 1.2e-65 253.8 216 66.2
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 1.2e-65 253.8 202 67.8
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 1.2e-65 253.8 223 63.2
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 2.0e-65 253.1 235 61.7
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 5.9e-65 251.5 203 68.5
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 1.0e-64 250.8 213 66.2
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 2.3e-64 249.6 196 69.9
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 3.0e-64 249.2 208 67.8
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 3.9e-64 248.8 238 61.3
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 3.9e-64 248.8 218 65.1
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 5.0e-64 248.4 208 66.3
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 1.1e-63 247.3 205 68.8
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 1.1e-63 247.3 204 68.6
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 2.5e-63 246.1 206 67.5
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 3.3e-63 245.7 208 67.8
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 4.3e-63 245.4 206 65.0
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 5.6e-63 245.0 217 62.2
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 7.3e-63 244.6 221 65.2
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 7.3e-63 244.6 203 67.5
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 1.2e-62 243.8 199 66.8
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 2.8e-62 242.7 220 65.5
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 4.7e-62 241.9 198 67.2
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 4.7e-62 241.9 214 65.4
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 6.2e-62 241.5 200 66.5
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.4e-61 240.4 205 65.4
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.4e-61 240.4 215 64.7
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 2.3e-61 239.6 202 66.3
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 2.3e-61 239.6 206 64.6
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 5.2e-61 238.4 223 61.9
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 5.2e-61 238.4 205 64.9
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 6.8e-61 238.0 219 61.6
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.5e-60 236.9 214 64.5
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 4.4e-60 235.3 191 67.5
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 4.4e-60 235.3 209 62.7
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 7.5e-60 234.6 208 63.5
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 7.5e-60 234.6 204 66.7
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 2.2e-59 233.0 204 64.7
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 2.2e-59 233.0 209 65.6
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 2.2e-59 233.0 199 64.8
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 3.7e-59 232.3 218 61.5
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 4.9e-59 231.9 204 66.2
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 4.9e-59 231.9 206 65.5
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 6.4e-59 231.5 232 59.5
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 6.4e-59 231.5 195 66.7
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 8.3e-59 231.1 205 63.9
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 8.3e-59 231.1 168 72.0
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 8.3e-59 231.1 208 62.5
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 1.1e-58 230.7 209 65.1
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 1.4e-58 230.3 206 63.1
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 1.9e-58 229.9 221 60.6
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 1.9e-58 229.9 203 64.0
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 2.4e-58 229.6 225 61.8
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 2.4e-58 229.6 222 61.7
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 3.2e-58 229.2 211 60.7
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 3.2e-58 229.2 223 62.3
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 4.1e-58 228.8 207 66.2
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 5.4e-58 228.4 225 62.7
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 5.4e-58 228.4 200 65.0
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 7.0e-58 228.0 226 60.6
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 7.0e-58 228.0 207 65.7
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 7.0e-58 228.0 226 60.6
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 7.0e-58 228.0 207 65.7
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 7.0e-58 228.0 201 67.2
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 1.2e-57 227.3 219 63.0
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 1.2e-57 227.3 224 60.3
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 1.2e-57 227.3 224 60.3
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 1.2e-57 227.3 263 52.9
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 2.7e-57 226.1 190 68.4
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 2.7e-57 226.1 217 61.8
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 3.5e-57 225.7 205 64.9
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 3.5e-57 225.7 206 63.6
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 4.6e-57 225.3 197 62.4
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 4.6e-57 225.3 207 64.3
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 4.6e-57 225.3 206 64.1
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 6.0e-57 224.9 205 64.9
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.7e-56 223.4 182 67.6
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 3.0e-56 222.6 220 61.4
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 3.0e-56 222.6 200 63.0
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 3.9e-56 222.2 224 59.8
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 3.9e-56 222.2 199 62.8
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 5.0e-56 221.9 211 60.7
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 6.6e-56 221.5 221 61.1
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 6.6e-56 221.5 203 60.6
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 1.1e-55 220.7 202 60.9
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 1.1e-55 220.7 177 69.5
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 1.1e-55 220.7 171 71.9
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 1.2e-54 217.2 176 68.2
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.6e-54 216.9 149 76.5
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 2.1e-54 216.5 152 74.3
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 2.8e-54 216.1 161 72.0
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.8e-54 216.1 181 65.7
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 2.8e-54 216.1 197 60.9
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 8.1e-54 214.5 177 67.2
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 1.1e-53 214.2 159 72.3
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 1.8e-53 213.4 153 73.9
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 1.2e-52 210.7 157 70.7
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 1.5e-52 210.3 171 69.6
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 5.8e-52 208.4 137 75.2
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 2.9e-51 206.1 197 62.4
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 1.0e-48 197.6 202 60.4
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 1.9e-47 193.4 204 58.3
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 4.3e-47 192.2 204 54.9
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 7.3e-47 191.4 147 70.1
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 9.5e-47 191.0 204 57.8
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 1.6e-46 190.3 185 58.4
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 8.1e-46 188.0 190 58.9
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 6.8e-45 184.9 128 75.8
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 3.8e-43 179.1 132 71.2
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 3.2e-42 176.0 134 67.2
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 3.5e-41 172.6 148 61.5
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 6.0e-41 171.8 133 66.2
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 5.6e-39 165.2 132 65.2
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 6.2e-38 161.8 203 50.7
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 5.1e-32 142.1 209 45.9
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 5.6e-31 138.7 137 60.6
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.3e-30 137.5 120 60.0
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 9.0e-29 131.3 139 57.6
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 2.6e-28 129.8 129 58.9
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 7.6e-28 128.3 217 45.2
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 1.1e-21 107.8 68 77.9
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 1.1e-21 107.8 68 77.9
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 5.3e-21 105.5 74 75.7
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.2e-18 95.9 70 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 8.7e-16 88.2 82 63.4
Actinidia26581 Actinidia chinensis HOM05D005382 ORTHO05D054410 2.1e-09 67.0 134 38.1
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 1.3e-08 64.3 45 75.6


User provided reference genes

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