Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 8.1e-42 173.3 88 100.0
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.1e-37 158.7 88 89.8
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 6.2e-34 147.1 86 88.4
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.1e-33 146.4 88 81.8
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 4.0e-33 144.4 88 83.0
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.6e-32 141.7 88 80.7
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.4e-32 141.4 88 80.7
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 3.4e-32 141.4 87 79.3
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 3.4e-32 141.4 85 81.2
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 5.8e-32 140.6 88 80.7
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 7.6e-32 140.2 88 79.5
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 9.9e-32 139.8 88 80.7
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.3e-31 139.4 88 79.5
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 2.2e-31 138.7 85 80.0
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 2.9e-31 138.3 88 78.4
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 2.9e-31 138.3 88 79.5
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 3.8e-31 137.9 85 78.8
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 4.9e-31 137.5 88 77.3
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 8.4e-31 136.7 88 76.1
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 1.4e-30 136.0 88 77.3
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 3.2e-30 134.8 88 78.4
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 4.2e-30 134.4 88 72.7
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 5.5e-30 134.0 80 83.8
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 5.5e-30 134.0 84 77.4
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 2.1e-29 132.1 88 75.0
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 2.1e-29 132.1 88 75.0
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 2.1e-29 132.1 83 79.5
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 2.1e-29 132.1 87 74.7
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 2.7e-29 131.7 83 79.5
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 2.7e-29 131.7 85 76.5
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.7e-29 131.7 80 81.2
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 2.7e-29 131.7 85 76.5
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 3.5e-29 131.3 87 71.3
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 3.5e-29 131.3 87 75.9
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 3.5e-29 131.3 83 78.3
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 3.5e-29 131.3 86 74.4
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 7.9e-29 130.2 89 75.3
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 7.9e-29 130.2 89 75.3
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 7.9e-29 130.2 85 74.1
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 7.9e-29 130.2 80 80.0
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 7.9e-29 130.2 88 75.0
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.3e-28 129.4 88 73.9
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.3e-28 129.4 88 73.9
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.8e-28 129.0 85 75.3
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 1.8e-28 129.0 85 75.3
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.8e-28 129.0 85 75.3
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.3e-28 128.6 88 69.3
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.3e-28 128.6 85 75.3
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 3.0e-28 128.3 88 69.3
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 3.9e-28 127.9 89 74.2
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.9e-28 127.9 80 78.8
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.9e-28 127.9 80 78.8
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 5.1e-28 127.5 88 72.7
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 6.7e-28 127.1 89 73.0
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 6.7e-28 127.1 89 73.0
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 8.7e-28 126.7 88 72.7
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 8.7e-28 126.7 89 73.0
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 8.7e-28 126.7 84 73.8
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 8.7e-28 126.7 88 71.6
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 1.9e-27 125.6 89 71.9
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.9e-27 125.6 89 71.9
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.5e-27 125.2 89 71.9
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 2.5e-27 125.2 91 72.5
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 4.3e-27 124.4 89 73.0
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 5.6e-27 124.0 89 71.9
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 5.6e-27 124.0 84 73.8
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 7.4e-27 123.6 80 76.2
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 4.8e-26 120.9 88 68.2
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 3.1e-25 118.2 86 70.9
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.2e-24 116.3 70 82.9
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 1.2e-24 116.3 70 84.3
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 1.5e-24 115.9 89 66.3
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 3.4e-24 114.8 82 68.3
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.0e-23 113.2 86 67.4
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 1.3e-23 112.8 89 66.3
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 1.7e-23 112.5 88 63.6
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 2.2e-23 112.1 86 66.3
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.9e-22 109.0 67 80.6
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.9e-22 109.0 88 62.5
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 1.9e-22 109.0 84 65.5
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.5e-22 108.6 73 72.6
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.5e-22 108.6 75 72.0
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 9.3e-22 106.7 83 65.1
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 4.6e-21 104.4 67 77.6
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.3e-20 102.1 72 66.7
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 8.7e-20 100.1 63 77.8
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.5e-19 98.6 72 66.7
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 3.3e-19 98.2 60 78.3
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.3e-19 98.2 83 62.7
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 5.7e-19 97.4 82 64.6
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.7e-18 94.7 73 69.9
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 4.8e-18 94.4 61 73.8
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 4.8e-18 94.4 81 60.5
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 8.2e-18 93.6 55 83.6
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.1e-17 93.2 76 65.8
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 2.4e-17 92.0 80 57.5
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 2.4e-17 92.0 82 62.2
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 3.1e-17 91.7 74 63.5
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.6e-16 88.6 80 56.2
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 7.2e-14 80.5 63 66.7
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 7.9e-13 77.0 52 67.3
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 5.1e-12 74.3 88 52.3
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 5.1e-12 74.3 91 49.5
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 6.7e-12 73.9 54 64.8
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 8.2e-10 67.0 70 54.3
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.8e-09 65.9 66 48.5
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 3.1e-09 65.1 57 61.4


User provided reference genes

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