Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.5e-121 439.5 223 100.0
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 2.9e-104 382.1 222 90.1
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 1.2e-46 190.7 228 49.6
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 1.6e-41 173.7 224 52.2
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 3.3e-39 166.0 232 47.0
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.9e-34 150.2 233 43.3
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.5e-31 140.6 237 40.5
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 2.5e-31 139.8 235 41.3
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 6.2e-30 135.2 216 42.6
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 1.1e-29 134.4 248 45.6
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.8e-29 133.7 230 38.3
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 1.8e-29 133.7 245 41.2
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.1e-29 132.9 243 40.3
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.0e-29 132.5 241 41.5
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.0e-29 132.5 244 41.8
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 5.3e-29 132.1 236 40.7
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 7.6e-28 128.3 236 39.8
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 4.6e-25 119.0 227 40.1
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 6.0e-25 118.6 239 36.4
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.0e-24 117.9 150 48.0
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.3e-24 116.7 227 40.1
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 1.1e-23 114.4 232 37.5
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.1e-23 114.4 226 35.4
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.1e-23 114.4 212 38.2
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.1e-23 114.4 212 38.2
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.5e-23 114.0 166 47.0
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.5e-23 114.0 229 35.4
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.4e-23 111.7 226 34.5
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 7.4e-23 111.7 226 34.5
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 2.8e-22 109.8 233 36.5
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.8e-22 109.0 226 37.2
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 1.1e-21 107.8 236 38.1
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 2.4e-21 106.7 162 46.9
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 5.3e-21 105.5 231 35.9
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 9.0e-21 104.8 214 38.3
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 9.0e-21 104.8 243 35.0
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.5e-20 104.0 235 37.0
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 2.0e-20 103.6 235 38.3
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.6e-20 103.2 218 36.2
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 5.8e-20 102.1 240 35.4
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 7.6e-20 101.7 215 35.8
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 7.6e-20 101.7 204 35.8
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.3e-19 100.9 232 37.5
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.7e-19 100.5 232 35.3
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.2e-19 100.1 232 35.3
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 3.8e-19 99.4 238 36.1
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 6.4e-19 98.6 249 36.5
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 6.4e-19 98.6 233 37.3
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.1e-18 97.8 208 34.6
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.1e-18 97.8 242 33.9
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.9e-18 97.1 232 34.9
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 2.4e-18 96.7 144 44.4
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 5.5e-18 95.5 236 36.9
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 5.5e-18 95.5 216 34.7
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.6e-17 94.0 272 33.1
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.7e-17 93.2 245 33.5
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 3.5e-17 92.8 226 34.5
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 4.6e-17 92.4 234 33.3
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.3e-16 90.1 226 32.3
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.9e-16 89.4 153 40.5
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 6.7e-16 88.6 201 37.3
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 2.5e-15 86.7 224 33.5
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.3e-15 86.3 217 34.6
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.3e-14 84.3 229 33.6
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 6.2e-14 82.0 222 32.9
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.4e-13 80.9 148 41.9
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 3.1e-13 79.7 228 34.2
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 9.0e-13 78.2 205 35.1
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 9.0e-13 78.2 208 30.8
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 2.6e-12 76.6 233 30.5
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.4e-12 76.3 227 31.3
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 4.5e-12 75.9 226 33.2
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 7.6e-12 75.1 225 30.7
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.3e-11 74.3 214 31.8
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 3.8e-11 72.8 226 31.4
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 3.8e-11 72.8 223 33.6
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 8.4e-11 71.6 216 32.4
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 1.4e-10 70.9 216 32.4
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 2.5e-10 70.1 226 31.0
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 3.2e-10 69.7 201 29.9
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 5.5e-10 68.9 122 38.5
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 7.1e-10 68.6 232 28.4
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 7.1e-10 68.6 233 31.3
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 9.3e-10 68.2 234 27.4
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 9.3e-10 68.2 216 29.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.2e-09 67.8 193 34.7
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 3.5e-09 66.2 217 29.5
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 3.5e-09 66.2 214 30.4
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 4.6e-09 65.9 240 28.8
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.3e-08 64.3 248 31.5
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 1.3e-08 64.3 133 36.8
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 2.3e-08 63.5 134 31.3
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.0e-08 63.2 156 34.0
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 5.1e-08 62.4 108 37.0
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 1.9e-07 60.5 239 26.4
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 1.9e-07 60.5 225 29.8
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 5.7e-07 58.9 228 30.3
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.1e-06 57.0 97 46.4
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 3.7e-06 56.2 238 29.4
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 4.8e-06 55.8 219 30.6
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 8.2e-06 55.1 136 33.8
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 8.2e-06 55.1 195 26.7


User provided reference genes

Program Settings