Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3979 Erigeron canadensis HOM05D003139 ORTHO05D029286 7.7e-138 493.8 251 100.0
Lsat_1_v5_gn_0_7921 Lactuca sativa HOM05D003139 ORTHO05D029286 4.6e-58 228.8 249 53.4
Lsat_1_v5_gn_8_24181 Lactuca sativa HOM05D003139 ORTHO05D029286 1.3e-36 157.5 164 50.6
ECA233G4679 Erigeron canadensis HOM05D003139 ORTHO05D029286 1.9e-27 127.1 233 39.1
DCAR_028475 Daucus carota HOM05D003139 ORTHO05D003540 4.4e-24 115.9 182 40.1
Dinv01029 Davidia involucrata HOM05D003139 ORTHO05D003540 3.3e-19 99.8 177 40.1
Dinv10925 Davidia involucrata HOM05D003139 ORTHO05D003540 3.3e-19 99.8 177 40.1
Sopen11g002810 Solanum pennellii HOM05D003139 ORTHO05D003540 3.0e-17 93.2 183 32.2
Solyc11g006900.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 1.5e-16 90.9 183 31.7
Nitab4.5_0009833g0020 Nicotiana tabacum HOM05D003139 ORTHO05D003540 9.8e-16 88.2 184 32.6
Dinv11834 Davidia involucrata HOM05D003139 ORTHO05D003540 4.9e-15 85.9 146 36.3
Duzib093G1338 Durio zibethinus HOM05D003139 ORTHO05D003540 4.9e-15 85.9 158 39.9
Hma1.2p1_0874F.1_g231330 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 1.4e-14 84.3 166 30.7
Oeu017682.1 Olea europaea HOM05D003139 ORTHO05D003540 1.4e-14 84.3 163 36.8
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 2.4e-14 83.6 161 37.3
CiPaw.10G010300 Carya illinoinensis HOM05D003139 ORTHO05D003540 4.1e-14 82.8 146 37.7
Nitab4.5_0013140g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 4.1e-14 82.8 184 31.5
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 4.1e-14 82.8 138 41.3
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 5.4e-14 82.4 161 36.6
Nitab4.5_0009769g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 5.4e-14 82.4 158 32.3
CsaV3_6G040710 Cucumis sativus L. HOM05D003139 ORTHO05D003540 1.2e-13 81.3 146 36.3
Ca_00900_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 2.0e-13 80.5 129 39.5
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 2.0e-13 80.5 164 36.0
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 2.7e-13 80.1 148 40.5
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.7e-13 80.1 146 39.7
MELO3C024549.2 Cucumis melo HOM05D003139 ORTHO05D003540 3.5e-13 79.7 139 34.5
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.6e-13 79.3 146 39.7
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.6e-13 79.3 146 39.7
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 4.6e-13 79.3 147 33.3
CSS0050344 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 7.8e-13 78.6 141 36.9
MD14G1023600 Malus domestica HOM05D003139 ORTHO05D003540 7.8e-13 78.6 161 33.5
Psat6g080520 Pisum sativum HOM05D003139 ORTHO05D003540 7.8e-13 78.6 129 38.8
CANSAT64G2974 Cannabis sativa HOM05D003139 ORTHO05D003540 1.0e-12 78.2 128 39.1
Cc06_g05890 Coffea canephora HOM05D003139 ORTHO05D003540 1.0e-12 78.2 157 35.0
PGR142G1499 Punica granatum HOM05D003139 ORTHO05D003540 1.0e-12 78.2 151 35.1
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.3e-12 77.8 148 39.9
Actinidia05423 Actinidia chinensis HOM05D003139 ORTHO05D003540 1.7e-12 77.4 144 35.4
Sed0022451 Sechium edule HOM05D003139 ORTHO05D003540 1.7e-12 77.4 160 35.0
PGSC0003DMG400023971 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.7e-12 77.4 174 31.0
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.3e-12 77.0 146 39.0
Nitab4.5_0005744g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 2.3e-12 77.0 162 30.2
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 2.3e-12 77.0 169 34.3
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 3.9e-12 76.3 139 33.8
Duzib106G1991 Durio zibethinus HOM05D003139 ORTHO05D003540 3.9e-12 76.3 147 37.4
Hma1.2p1_0820F.1_g223870 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 3.9e-12 76.3 142 37.3
Oeu047862.1 Olea europaea HOM05D003139 ORTHO05D003540 3.9e-12 76.3 178 32.6
Phvul.007G152700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 5.0e-12 75.9 124 38.7
Prupe.7G109200 Prunus persica HOM05D003139 ORTHO05D003540 5.0e-12 75.9 139 35.3
Sed0010191 Sechium edule HOM05D003139 ORTHO05D003540 5.0e-12 75.9 126 38.9
Thecc.05G090100 Theobroma cacao HOM05D003139 ORTHO05D003540 5.0e-12 75.9 145 37.2
Atru.chr8.1495 Acer truncatum HOM05D003139 ORTHO05D003540 6.6e-12 75.5 135 37.0
TPR.G9897 Trifolium pratense HOM05D003139 ORTHO05D003540 6.6e-12 75.5 127 37.8
Glyma.03G196500 Glycine max HOM05D003139 ORTHO05D003540 1.1e-11 74.7 139 36.7
TPR.G23344 Trifolium pratense HOM05D003139 ORTHO05D003540 1.5e-11 74.3 182 33.0
CSS0031410 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 1.9e-11 73.9 148 35.1
Medtr1g059890 Medicago truncatula HOM05D003139 ORTHO05D003540 1.9e-11 73.9 136 37.5
Peaxi162Scf00519g00066 Petunia axillaris HOM05D003139 ORTHO05D003540 1.9e-11 73.9 200 30.0
Psat3g032560 Pisum sativum HOM05D003139 ORTHO05D003540 1.9e-11 73.9 145 36.6
Solyc05g055270.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 2.5e-11 73.6 167 31.7
Lsat_1_v5_gn_5_164981 Lactuca sativa HOM05D003139 ORTHO05D003540 4.3e-11 72.8 149 35.6
MD12G1024700 Malus domestica HOM05D003139 ORTHO05D003540 4.3e-11 72.8 164 32.9
Manes.08G025900 Manihot esculenta HOM05D003139 ORTHO05D003540 4.3e-11 72.8 163 32.5
ECA247G2190 Erigeron canadensis HOM05D003139 ORTHO05D003540 5.6e-11 72.4 132 40.9
Gohir.A09G139500 Gossypium hirsutum HOM05D003139 ORTHO05D003540 5.6e-11 72.4 148 36.5
CiPaw.09G014800 Carya illinoinensis HOM05D003139 ORTHO05D003540 7.3e-11 72.0 164 34.8
Oeu012633.1 Olea europaea HOM05D003139 ORTHO05D003540 7.3e-11 72.0 150 33.3
Oeu047203.1 Olea europaea HOM05D003139 ORTHO05D003540 7.3e-11 72.0 165 35.2
MSTRG.10370 Avicennia marina HOM05D003139 ORTHO05D003540 9.5e-11 71.6 147 36.7
Medtr7g104725 Medicago truncatula HOM05D003139 ORTHO05D003540 9.5e-11 71.6 154 31.8
TWI74G1218 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 9.5e-11 71.6 140 39.3
Actinidia31269 Actinidia chinensis HOM05D003139 ORTHO05D003540 1.2e-10 71.2 133 35.3
Sabra06G0163800 Salix brachista HOM05D003139 ORTHO05D003540 1.6e-10 70.9 127 35.4
Haze_19619 Corylus avellana HOM05D003139 ORTHO05D003540 2.1e-10 70.5 140 35.0
Dinv21200 Davidia involucrata HOM05D003139 ORTHO05D003540 2.1e-10 70.5 126 36.5
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 2.8e-10 70.1 168 30.4
COL.COLO4_29723 Corchorus olitorius HOM05D003139 ORTHO05D003540 2.8e-10 70.1 136 38.2
Gohir.D09G135100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.8e-10 70.1 147 35.4
Gorai.006G155000 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.8e-10 70.1 147 35.4
Solyc09g009840.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 2.8e-10 70.1 149 35.6
DCAR_020744 Daucus carota HOM05D003139 ORTHO05D003540 3.6e-10 69.7 135 35.6
QL07p038927 Quercus lobata HOM05D003139 ORTHO05D003540 3.6e-10 69.7 148 33.8
VMungo0720G0359 Vigna mungo HOM05D003139 ORTHO05D003540 3.6e-10 69.7 143 35.0
Lalb_Chr02g0154921 Lupinus albus HOM05D003139 ORTHO05D003540 6.2e-10 68.9 129 38.0
Nn6g34887 Nelumbo nucifera HOM05D003139 ORTHO05D003540 6.2e-10 68.9 158 33.5
Oeu025672.1 Olea europaea HOM05D003139 ORTHO05D003540 6.2e-10 68.9 151 33.1
Oeu056878.1 Olea europaea HOM05D003139 ORTHO05D003540 6.2e-10 68.9 149 35.6
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 6.2e-10 68.9 144 36.1
Cfa016615 Carpinus fangiana HOM05D003139 ORTHO05D003540 8.0e-10 68.6 140 35.0
Gohir.A04G062300 Gossypium hirsutum HOM05D003139 ORTHO05D003540 8.0e-10 68.6 155 36.8
HanXRQChr01g0010381 Helianthus annuus HOM05D003139 ORTHO05D003540 1.0e-09 68.2 125 38.4
Glyma.19G194957 Glycine max HOM05D003139 ORTHO05D003540 1.4e-09 67.8 144 36.1
Potri.006G212800 Populus trichocarpa HOM05D003139 ORTHO05D003540 1.4e-09 67.8 153 31.4
Potri.016G079500 Populus trichocarpa HOM05D003139 ORTHO05D003540 1.4e-09 67.8 130 36.2
Sopen09g004600 Solanum pennellii HOM05D003139 ORTHO05D003540 1.4e-09 67.8 120 36.7
Nitab4.5_0000692g0050 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.8e-09 67.4 126 35.7
EL10Ac7g16909 Beta vulgaris HOM05D003139 ORTHO05D003540 3.1e-09 66.6 161 29.2
Gohir.A01G206000 Gossypium hirsutum HOM05D003139 ORTHO05D003540 3.1e-09 66.6 146 37.7
Gohir.D01G195400 Gossypium hirsutum HOM05D003139 ORTHO05D003540 3.1e-09 66.6 146 37.7
Gorai.002G239600 Gossypium raimondii HOM05D003139 ORTHO05D003540 3.1e-09 66.6 146 37.7
Oeu024810.1 Olea europaea HOM05D003139 ORTHO05D003540 4.0e-09 66.2 130 33.8
PGSC0003DMG400023494 Solanum tuberosum HOM05D003139 ORTHO05D003540 4.0e-09 66.2 148 31.1
VMungo1383G1679 Vigna mungo HOM05D003139 ORTHO05D003540 4.0e-09 66.2 141 33.3
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 5.2e-09 65.9 175 28.6
Glyma.10G073600 Glycine max HOM05D003139 ORTHO05D003540 5.2e-09 65.9 132 35.6
Lj5g0002620 Lotus japonicus HOM05D003139 ORTHO05D003540 5.2e-09 65.9 143 37.1
Lalb_Chr20g0111681 Lupinus albus HOM05D003139 ORTHO05D003540 5.2e-09 65.9 137 30.7
AT2G36220 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 6.8e-09 65.5 141 32.6
AUR62028515 Chenopodium quinoa HOM05D003139 ORTHO05D003540 6.8e-09 65.5 169 30.2
Lalb_Chr25g0288311 Lupinus albus HOM05D003139 ORTHO05D003540 6.8e-09 65.5 170 32.4
Sabra16G0085400 Salix brachista HOM05D003139 ORTHO05D003540 8.9e-09 65.1 131 34.4
Sabra16G0087500 Salix brachista HOM05D003139 ORTHO05D003540 8.9e-09 65.1 131 34.4
SalBow5G1418 Salvia bowleyana HOM05D003139 ORTHO05D003540 8.9e-09 65.1 169 32.5
SalBow6G1960 Salvia bowleyana HOM05D003139 ORTHO05D003540 8.9e-09 65.1 147 29.3
Sopen05g033710 Solanum pennellii HOM05D003139 ORTHO05D003540 8.9e-09 65.1 167 29.3
PGSC0003DMG400008878 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.2e-08 64.7 150 34.7
BcaC02g11724 Brassica carinata HOM05D003139 ORTHO05D003540 1.5e-08 64.3 144 29.9
C04p11930 Brassica napus HOM05D003139 ORTHO05D003540 1.5e-08 64.3 144 29.9
BolC4t22840H Brassica oleracea HOM05D003139 ORTHO05D003540 1.5e-08 64.3 144 29.9
BraA05t19916Z Brassica rapa HOM05D003139 ORTHO05D003540 1.5e-08 64.3 144 29.9
DCAR_009168 Daucus carota HOM05D003139 ORTHO05D003540 1.5e-08 64.3 125 37.6
Manes.09G054800 Manihot esculenta HOM05D003139 ORTHO05D003540 1.5e-08 64.3 152 31.6
A05p09620 Brassica napus HOM05D003139 ORTHO05D003540 2.0e-08 63.9 144 29.9
BolC4t28004H Brassica oleracea HOM05D003139 ORTHO05D003540 2.0e-08 63.9 142 31.0
CSS0009772 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 2.0e-08 63.9 126 34.1
HanXRQChr04g0109341 Helianthus annuus HOM05D003139 ORTHO05D003540 2.0e-08 63.9 137 35.0
HanXRQChr08g0229891 Helianthus annuus HOM05D003139 ORTHO05D003540 2.6e-08 63.5 153 35.9
MELO3C009477.2 Cucumis melo HOM05D003139 ORTHO05D003540 4.4e-08 62.8 148 33.1
Duzib128G1370 Durio zibethinus HOM05D003139 ORTHO05D003540 4.4e-08 62.8 145 33.8
Peaxi162Scf00404g00061 Petunia axillaris HOM05D003139 ORTHO05D003540 4.4e-08 62.8 154 27.9
BraA04t18268Z Brassica rapa HOM05D003139 ORTHO05D003540 5.8e-08 62.4 142 31.0
Migut.L01785 Erythranthe guttata HOM05D003139 ORTHO05D003540 5.8e-08 62.4 149 32.2
Rhsim04G0132000 Rhododendron simsii HOM05D003139 ORTHO05D003540 5.8e-08 62.4 140 32.1
Glyma.13G154300 Glycine max HOM05D003139 ORTHO05D003540 7.5e-08 62.0 137 34.3
TAR369G0615 Trochodendron aralioides HOM05D003139 ORTHO05D003540 7.5e-08 62.0 133 36.1
BcaB06g28923 Brassica carinata HOM05D003139 ORTHO05D003540 9.8e-08 61.6 145 31.7
BcaC02g07620 Brassica carinata HOM05D003139 ORTHO05D003540 9.8e-08 61.6 142 30.3
ECA248G2961 Erigeron canadensis HOM05D003139 ORTHO05D003540 1.3e-07 61.2 138 33.3
CARHR130460 Cardamine hirsuta HOM05D003139 ORTHO05D003540 1.7e-07 60.8 150 30.7
Gohir.D04G099100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.2e-07 60.5 155 35.5
Gorai.009G401500 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.2e-07 60.5 155 35.5
BcaB02g09375 Brassica carinata HOM05D003139 ORTHO05D003540 2.9e-07 60.1 158 29.7
Cpa.g.sc5.12 Carica papaya HOM05D003139 ORTHO05D003540 2.9e-07 60.1 126 35.7
PGSC0003DMG400028163 Solanum tuberosum HOM05D003139 ORTHO05D003540 2.9e-07 60.1 129 34.1
Aqoxy4G02769 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 3.7e-07 59.7 196 29.1
Lsat_1_v5_gn_8_77361 Lactuca sativa HOM05D003139 ORTHO05D003540 3.7e-07 59.7 134 34.3
PGR004G2661 Punica granatum HOM05D003139 ORTHO05D003540 3.7e-07 59.7 146 33.6
A09p45800 Brassica napus HOM05D003139 ORTHO05D003540 4.9e-07 59.3 134 34.3
BraA09t40041Z Brassica rapa HOM05D003139 ORTHO05D003540 4.9e-07 59.3 134 34.3
Solyc10g083330.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 4.9e-07 59.3 129 34.1
Sopen10g032810 Solanum pennellii HOM05D003139 ORTHO05D003540 4.9e-07 59.3 129 34.1
BcaC07g39636 Brassica carinata HOM05D003139 ORTHO05D003540 8.3e-07 58.5 134 34.3
C08p27990 Brassica napus HOM05D003139 ORTHO05D003540 8.3e-07 58.5 134 34.3
BolC8t50411H Brassica oleracea HOM05D003139 ORTHO05D003540 8.3e-07 58.5 134 34.3
AL4G32320 Arabidopsis lyrata HOM05D003139 ORTHO05D003540 1.1e-06 58.2 141 31.2
Nitab4.5_0001933g0030 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.1e-06 58.2 128 35.2
Aa31LG10G7720 Aethionema arabicum HOM05D003139 ORTHO05D003540 1.9e-06 57.4 134 32.8
Migut.J01028 Erythranthe guttata HOM05D003139 ORTHO05D003540 1.9e-06 57.4 142 35.2
Ciclev10012256m.g Citrus clementina HOM05D003139 ORTHO05D003540 2.4e-06 57.0 157 33.8
TAR633G0951 Trochodendron aralioides HOM05D003139 ORTHO05D003540 2.4e-06 57.0 209 23.4
DCAR_013395 Daucus carota HOM05D003139 ORTHO05D003540 3.2e-06 56.6 180 28.9
Lsat_1_v5_gn_9_20601 Lactuca sativa HOM05D003139 ORTHO05D003540 3.2e-06 56.6 127 33.9
Sp4g18440 Schrenkiella parvula HOM05D003139 ORTHO05D003540 3.2e-06 56.6 149 30.9
Thhalv10017798m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 4.1e-06 56.2 146 30.8
Lj1g0000022 Lotus japonicus HOM05D003139 ORTHO05D003540 4.1e-06 56.2 140 32.1
Aa31LG5G21340 Aethionema arabicum HOM05D003139 ORTHO05D003540 5.4e-06 55.8 201 31.3
Carub.0005s1916 Capsella rubella HOM05D003139 ORTHO05D003540 5.4e-06 55.8 134 29.9
HanXRQChr04g0109331 Helianthus annuus HOM05D003139 ORTHO05D003540 5.4e-06 55.8 144 34.0


User provided reference genes

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