Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 2.0e-89 332.4 170 100.0
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 1.2e-68 263.5 179 78.8
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 5.4e-66 254.6 174 78.7
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.2e-62 243.4 182 73.1
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 6.8e-61 237.7 187 70.1
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 1.5e-60 236.5 180 71.1
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 1.5e-60 236.5 167 74.3
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 7.5e-60 234.2 168 73.8
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.3e-59 233.4 169 72.2
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 1.7e-59 233.0 184 69.6
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 2.2e-59 232.6 167 74.3
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 4.9e-59 231.5 182 69.8
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 6.3e-59 231.1 185 69.7
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 6.3e-59 231.1 179 68.7
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 6.3e-59 231.1 168 73.8
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 8.3e-59 230.7 182 69.8
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.1e-58 230.3 185 67.6
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 1.1e-58 230.3 176 68.8
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.4e-58 229.9 185 67.6
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 1.4e-58 229.9 168 72.6
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.8e-58 229.6 189 66.7
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 5.4e-58 228.0 181 68.0
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 5.4e-58 228.0 176 68.8
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 9.2e-58 227.3 179 68.7
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 9.2e-58 227.3 176 70.5
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.2e-57 226.9 168 72.0
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 1.2e-57 226.9 170 71.8
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 4.5e-57 224.9 197 65.0
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.3e-56 223.4 186 66.7
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 2.3e-56 222.6 187 64.7
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 2.9e-56 222.2 177 67.2
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 2.9e-56 222.2 183 65.6
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 3.8e-56 221.9 185 65.9
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 6.6e-56 221.1 187 63.6
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 6.6e-56 221.1 183 67.8
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.5e-55 219.9 185 65.4
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 1.5e-55 219.9 187 65.8
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 3.3e-55 218.8 186 65.1
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 3.3e-55 218.8 187 66.3
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 4.3e-55 218.4 178 65.2
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 7.3e-55 217.6 182 65.4
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 7.3e-55 217.6 180 67.8
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 9.5e-55 217.2 186 65.6
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 9.5e-55 217.2 169 69.2
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 9.5e-55 217.2 186 65.1
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.6e-54 216.5 190 64.7
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 2.1e-54 216.1 186 64.0
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.8e-54 215.7 191 65.4
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 3.6e-54 215.3 187 67.9
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 3.6e-54 215.3 181 63.5
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 3.6e-54 215.3 178 68.5
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 3.6e-54 215.3 178 68.5
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 6.1e-54 214.5 186 63.4
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 6.1e-54 214.5 185 63.8
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 6.1e-54 214.5 184 65.8
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 8.0e-54 214.2 177 67.8
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 1.0e-53 213.8 173 67.1
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 1.0e-53 213.8 186 63.4
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.4e-53 213.4 183 66.1
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.4e-53 213.4 187 62.6
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 3.0e-53 212.2 184 63.6
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 4.0e-53 211.8 185 63.2
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 6.8e-53 211.1 187 62.0
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 6.8e-53 211.1 176 65.9
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 6.8e-53 211.1 163 73.0
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 8.9e-53 210.7 181 63.0
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.6e-52 209.1 153 72.5
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 2.6e-52 209.1 185 62.2
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 9.8e-52 207.2 181 60.8
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 2.2e-51 206.1 176 63.6
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 3.7e-51 205.3 171 63.2
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 8.3e-51 204.1 179 63.7
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 8.3e-51 204.1 176 63.1
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.1e-50 203.8 182 59.3
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 1.4e-50 203.4 181 61.9
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 2.4e-50 202.6 178 62.9
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 2.4e-50 202.6 182 58.8
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 3.2e-50 202.2 184 63.6
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 3.2e-50 202.2 122 83.6
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 4.1e-50 201.8 182 65.9
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.1e-50 201.8 180 63.9
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.2e-49 200.3 182 58.8
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.2e-49 200.3 181 62.4
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 2.7e-49 199.1 164 67.1
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 4.6e-49 198.4 168 61.3
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 4.6e-49 198.4 115 87.0
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 7.8e-49 197.6 169 60.4
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.0e-48 197.2 239 52.7
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.3e-48 196.8 109 87.2
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 1.3e-48 196.8 200 55.5
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 2.3e-48 196.1 109 87.2
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 6.6e-48 194.5 184 60.9
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 1.5e-47 193.4 160 63.1
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 7.3e-47 191.0 114 85.1
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.6e-46 189.9 170 62.4
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.6e-46 189.9 120 76.7
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 2.8e-46 189.1 144 73.6
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 2.8e-46 189.1 135 77.0
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 8.0e-46 187.6 177 61.6
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 2.3e-45 186.0 110 80.0
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 4.0e-45 185.3 110 82.7
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 6.8e-45 184.5 120 81.7
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 2.0e-44 183.0 185 57.3
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 1.7e-43 179.9 189 56.1
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.4e-42 176.8 166 58.4
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.7e-40 169.9 135 69.6
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.7e-40 169.9 179 57.0
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.1e-38 162.9 177 56.5
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 9.8e-36 154.1 92 78.3
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 6.4e-35 151.4 88 83.0
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 8.3e-35 151.0 92 77.2
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.7e-33 146.0 83 85.5
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 2.3e-32 142.9 92 76.1
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 3.0e-32 142.5 103 63.1
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 6.6e-32 141.4 124 55.6
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 1.4e-29 133.7 70 90.0
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 3.1e-29 132.5 155 46.5
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 9.9e-28 127.5 99 60.6
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 1.3e-27 127.1 136 57.4
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.3e-27 127.1 90 66.7
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 8.4e-27 124.4 70 82.9
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 1.1e-26 124.0 94 62.8
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.9e-26 123.2 101 56.4
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 7.1e-26 121.3 130 55.4
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 5.6e-23 111.7 124 51.6
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 2.8e-22 109.4 140 43.6
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 1.7e-19 100.1 92 55.4
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.9e-10 70.1 92 37.0


User provided reference genes

Program Settings