Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 2.1e-79 298.9 144 100.0
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 5.7e-61 237.7 146 78.1
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 3.7e-60 235.0 143 76.9
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 6.3e-60 234.2 143 74.1
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.8e-59 232.6 143 75.5
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 1.8e-59 232.6 143 75.5
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 2.4e-59 232.3 142 76.8
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 2.0e-58 229.2 142 73.9
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 2.7e-58 228.8 141 74.5
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 5.9e-58 227.6 143 74.8
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 7.8e-58 227.3 140 73.6
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.0e-57 226.9 140 73.6
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 5.0e-57 224.6 145 72.4
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 6.6e-57 224.2 143 73.4
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 2.5e-56 222.2 142 72.5
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 3.3e-56 221.9 143 72.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.3e-56 221.5 141 75.2
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 4.3e-56 221.5 142 71.8
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 4.3e-56 221.5 140 71.4
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 7.3e-56 220.7 144 71.5
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.2e-55 219.9 141 73.0
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.2e-55 219.9 141 73.0
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 2.1e-55 219.2 146 71.2
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 4.7e-55 218.0 140 71.4
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 4.7e-55 218.0 143 72.0
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 6.1e-55 217.6 145 69.7
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 1.4e-54 216.5 141 70.9
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.3e-54 215.7 144 71.5
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 3.0e-54 215.3 147 71.4
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 3.0e-54 215.3 141 72.3
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.5e-53 213.0 144 70.1
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 1.5e-53 213.0 147 70.7
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 2.6e-53 212.2 144 69.4
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 1.3e-52 209.9 136 72.8
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 1.3e-52 209.9 142 69.7
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.3e-52 209.9 138 68.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.9e-52 208.8 139 69.1
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 3.7e-52 208.4 142 70.4
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.7e-52 208.4 142 70.4
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.7e-52 208.4 143 67.1
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 4.9e-52 208.0 138 72.5
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 8.3e-52 207.2 143 65.7
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 8.3e-52 207.2 146 69.9
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 8.3e-52 207.2 143 67.1
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 8.3e-52 207.2 144 70.8
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 8.3e-52 207.2 143 68.5
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 8.3e-52 207.2 143 66.4
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.8e-51 206.1 142 69.7
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 3.2e-51 205.3 143 65.7
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 3.2e-51 205.3 144 66.0
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 4.1e-51 204.9 143 66.4
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 4.1e-51 204.9 141 68.8
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.0e-51 204.1 142 68.3
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 1.2e-50 203.4 144 65.3
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.6e-50 203.0 143 65.7
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.6e-50 203.0 143 66.4
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 4.6e-50 201.4 142 68.3
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 7.8e-50 200.7 143 65.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.0e-49 200.3 117 76.1
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.3e-49 199.9 184 56.0
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.5e-48 195.7 118 76.3
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.2e-47 193.4 118 72.9
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.1e-47 192.6 116 72.4
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.1e-47 192.6 144 67.4
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 8.0e-47 190.7 144 63.9
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 3.1e-46 188.7 136 62.5
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 2.6e-45 185.7 140 64.3
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 5.8e-45 184.5 174 52.9
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 7.5e-45 184.1 144 63.9
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 3.7e-44 181.8 119 68.9
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 7.0e-43 177.6 115 73.0
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.6e-42 176.4 146 58.9
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.3e-41 173.3 172 52.9
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 3.0e-41 172.2 116 69.8
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 4.7e-39 164.9 160 53.1
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 6.2e-39 164.5 101 67.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.4e-38 163.3 254 39.0
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 1.4e-38 163.3 102 75.5
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.8e-38 162.9 126 61.9
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 8.9e-38 160.6 121 63.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 9.9e-37 157.1 101 68.3
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.2e-36 156.0 112 64.3
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.9e-36 155.6 140 55.0
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 4.9e-36 154.8 143 53.1
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 2.4e-35 152.5 141 51.1
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 4.1e-35 151.8 136 57.4
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 4.6e-34 148.3 101 68.3
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 8.6e-33 144.1 103 66.0
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.1e-32 143.7 143 52.4
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.9e-32 142.9 141 56.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 2.5e-32 142.5 141 48.2
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 9.5e-32 140.6 89 68.5
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.6e-31 139.8 166 46.4
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 2.1e-31 139.4 142 52.8
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 2.1e-31 139.4 90 76.7
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 4.4e-29 131.7 115 51.3
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 8.4e-28 127.5 77 70.1
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 8.4e-28 127.5 105 59.0
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.4e-27 124.8 109 61.5
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.2e-26 123.6 77 71.4
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.7e-26 122.5 115 54.8
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.0e-25 120.6 73 72.6
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 5.1e-25 118.2 116 53.4
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.1e-24 117.1 92 62.0
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 1.9e-24 116.3 127 47.2
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 3.3e-24 115.5 84 64.3
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 4.7e-23 111.7 156 42.3
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.6e-21 105.9 79 63.3
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 5.8e-21 104.8 122 41.8
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.4e-19 99.4 91 53.8
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 3.2e-19 99.0 115 42.6
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 4.2e-19 98.6 82 64.6
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.3e-17 93.6 128 44.5
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.6e-13 77.8 65 58.5
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 3.3e-08 62.4 57 63.2
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 2.8e-07 59.3 41 73.2


User provided reference genes

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