Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3803 Erigeron canadensis HOM05D002829 ORTHO05D003124 1.3e-123 446.8 300 100.0
Lsat_1_v5_gn_4_1720 Lactuca sativa HOM05D002829 ORTHO05D003124 1.8e-53 213.8 304 51.0
HanXRQChr17g0568751 Helianthus annuus HOM05D002829 ORTHO05D003124 6.2e-49 198.7 276 48.6
QL03p048302 Quercus lobata HOM05D002829 ORTHO05D003124 3.8e-14 83.2 167 41.9
Sabra01G0049600 Salix brachista HOM05D002829 ORTHO05D003124 1.4e-13 81.3 233 33.5
Eucgr.J01660 Eucalyptus grandis HOM05D002829 ORTHO05D003124 7.1e-13 79.0 176 41.5
Oeu011726.1 Olea europaea HOM05D002829 ORTHO05D003124 9.3e-13 78.6 199 32.7
Sabra03G0116300 Salix brachista HOM05D002829 ORTHO05D003124 9.3e-13 78.6 263 33.5
Cfa009474 Carpinus fangiana HOM05D002829 ORTHO05D003124 1.2e-12 78.2 134 45.5
Haze_12531 Corylus avellana HOM05D002829 ORTHO05D003124 1.2e-12 78.2 134 45.5
Potri.003G160000 Populus trichocarpa HOM05D002829 ORTHO05D003124 1.2e-12 78.2 262 32.1
Prupe.1G211200 Prunus persica HOM05D002829 ORTHO05D003124 2.1e-12 77.4 219 32.9
CiPaw.05G097800 Carya illinoinensis HOM05D002829 ORTHO05D003124 3.5e-12 76.6 137 43.8
Cpa.g.sc38.55 Carica papaya HOM05D002829 ORTHO05D003124 1.3e-11 74.7 199 33.2
PGR102G0495 Punica granatum HOM05D002829 ORTHO05D003124 2.3e-11 73.9 218 30.7
Atru.chr12.1478 Acer truncatum HOM05D002829 ORTHO05D003124 3.0e-11 73.6 156 44.9
TAR622G0550 Trochodendron aralioides HOM05D002829 ORTHO05D003124 3.9e-11 73.2 152 40.8
Potri.001G070700 Populus trichocarpa HOM05D002829 ORTHO05D003124 6.7e-11 72.4 269 31.2
CSS0000234 Camellia sinensis var. sinensis HOM05D002829 ORTHO05D003124 1.1e-10 71.6 119 56.3
CSS0019210 Camellia sinensis var. sinensis HOM05D002829 ORTHO05D003124 1.1e-10 71.6 119 56.3
Sed0018664 Sechium edule HOM05D002829 ORTHO05D003124 1.1e-10 71.6 187 32.6
Gohir.A11G059300 Gossypium hirsutum HOM05D002829 ORTHO05D003124 2.5e-10 70.5 237 31.2
CiPaw.06G111500 Carya illinoinensis HOM05D002829 ORTHO05D003124 4.3e-10 69.7 162 42.6
MELO3C026752.2 Cucumis melo HOM05D002829 ORTHO05D003124 4.3e-10 69.7 197 33.0
Gorai.007G068500 Gossypium raimondii HOM05D002829 ORTHO05D003124 4.3e-10 69.7 237 31.2
THA.LOC104820537 Tarenaya hassleriana HOM05D002829 ORTHO05D003124 4.3e-10 69.7 227 29.5
Ciclev10029923m.g Citrus clementina HOM05D002829 ORTHO05D003124 7.4e-10 68.9 245 31.8
MD16G1144900 Malus domestica HOM05D002829 ORTHO05D003124 7.4e-10 68.9 218 31.7
FvH4_4g22140 Fragaria vesca HOM05D002829 ORTHO05D003124 9.6e-10 68.6 146 38.4
FAN12G1147 Fragaria x ananassa HOM05D002829 ORTHO05D003124 9.6e-10 68.6 146 38.4
Manes.08G099100 Manihot esculenta HOM05D002829 ORTHO05D003124 1.3e-09 68.2 134 40.3
RcHm_v2.0_Chr4g0428381 Rosa chinensis HOM05D002829 ORTHO05D003124 1.3e-09 68.2 208 31.2
Sed0013476 Sechium edule HOM05D002829 ORTHO05D003124 1.3e-09 68.2 196 30.1
Duzib264G0406 Durio zibethinus HOM05D002829 ORTHO05D003124 2.1e-09 67.4 134 43.3
TWI18G0126 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 2.1e-09 67.4 237 27.8
Gohir.D11G063400 Gossypium hirsutum HOM05D002829 ORTHO05D003124 2.8e-09 67.0 260 29.2
MD13G1134300 Malus domestica HOM05D002829 ORTHO05D003124 2.8e-09 67.0 227 30.4
FAN07G1465 Fragaria x ananassa HOM05D002829 ORTHO05D003124 3.6e-09 66.6 114 41.2
FAN17G0858 Fragaria x ananassa HOM05D002829 ORTHO05D003124 3.6e-09 66.6 114 41.2
Thecc.01G239500 Theobroma cacao HOM05D002829 ORTHO05D003124 3.6e-09 66.6 143 42.7
TWI75G0707 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 4.8e-09 66.2 262 28.6
TWI36G1156 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 6.2e-09 65.9 127 41.7
MBI11_g17276_MAGBIO Magnolia biondii HOM05D002829 ORTHO05D003124 8.1e-09 65.5 228 29.8
CDE09G0437 Ceratophyllum demersum HOM05D002829 ORTHO05D003124 1.1e-08 65.1 113 42.5
Oeu010270.1 Olea europaea HOM05D002829 ORTHO05D003124 4.0e-08 63.2 108 41.7
PSO478G2462 Papaver somniferum HOM05D002829 ORTHO05D003124 1.5e-07 61.2 199 32.7
ClCG10G013080 Citrullus lanatus HOM05D002829 ORTHO05D003124 2.0e-07 60.8 200 32.0
PSO017G0067 Papaver somniferum HOM05D002829 ORTHO05D003124 2.6e-07 60.5 199 32.2
CDE02G1175 Ceratophyllum demersum HOM05D002829 ORTHO05D003124 3.4e-07 60.1 117 39.3
Duzib147G1098 Durio zibethinus HOM05D002829 ORTHO05D003124 4.5e-07 59.7 237 29.5
MSTRG.8064 Avicennia marina HOM05D002829 ORTHO05D003124 1.3e-06 58.2 209 26.8
MBI07_g42014_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D010528 1.3e-06 58.2 211 28.0
MSTRG.439 Avicennia marina HOM05D002829 ORTHO05D003124 6.4e-06 55.8 189 27.5
COL.COLO4_16099 Corchorus olitorius HOM05D002829 ORTHO05D003124 6.4e-06 55.8 202 27.7


User provided reference genes

Program Settings