Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3774 Erigeron canadensis HOM05D026783 ORTHO05D029288 1.4e-100 369.8 202 100.0
Lsat_1_v5_gn_4_105901 Lactuca sativa HOM05D001781 ORTHO05D001711 9.3e-17 91.3 82 47.6
Actinidia15795 Actinidia chinensis HOM05D001781 ORTHO05D001711 6.9e-12 75.1 97 39.2
Nitab4.5_0002257g0050 Nicotiana tabacum HOM05D001781 ORTHO05D001711 1.2e-11 74.3 77 48.1
Nitab4.5_0006574g0060 Nicotiana tabacum HOM05D001781 ORTHO05D001711 2.6e-11 73.2 77 46.8
Oeu063806.2 Olea europaea HOM05D001781 ORTHO05D001711 2.6e-11 73.2 88 40.9
CSS0002175 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.5e-11 72.4 135 29.6
CARHR129570 Cardamine hirsuta HOM05D001781 ORTHO05D001711 1.3e-10 70.9 108 36.1
HanXRQChr16g0500561 Helianthus annuus HOM05D026783 ORTHO05D029288 5.0e-10 68.9 91 70.3
ATR1156G002 Amborella trichopoda HOM05D001781 ORTHO05D001711 1.4e-09 67.4 103 35.9
Migut.I00800 Erythranthe guttata HOM05D001781 ORTHO05D001711 1.9e-09 67.0 95 34.7
Sp4g17650 Schrenkiella parvula HOM05D001781 ORTHO05D001711 1.9e-09 67.0 115 33.9
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 2.5e-09 66.6 103 35.9
BraA05t19969Z Brassica rapa HOM05D001781 ORTHO05D001711 4.2e-09 65.9 107 35.5
Solyc03g116410.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 4.2e-09 65.9 85 47.1
TAR625G1385 Trochodendron aralioides HOM05D001781 ORTHO05D001711 4.2e-09 65.9 101 34.7
CAN.G407.109 Capsicum annuum HOM05D001781 ORTHO05D001711 5.5e-09 65.5 88 43.2
AT2G35430 Arabidopsis thaliana HOM05D001781 ORTHO05D001711 7.1e-09 65.1 105 34.3
Lsat_1_v5_gn_4_105961 Lactuca sativa HOM05D026783 ORTHO05D029288 7.1e-09 65.1 59 67.8
RcHm_v2.0_Chr2g0089141 Rosa chinensis HOM05D001781 ORTHO05D001711 7.1e-09 65.1 121 25.6
Aa31LG9G15440 Aethionema arabicum HOM05D001781 ORTHO05D001711 9.3e-09 64.7 111 32.4
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 1.2e-08 64.3 104 35.6
BcaB02g09431 Brassica carinata HOM05D001781 ORTHO05D001711 1.6e-08 63.9 122 32.0
Thhalv10016994m.g Eutrema salsugineum HOM05D001781 ORTHO05D001711 1.6e-08 63.9 116 33.6
HanXRQChr09g0274911 Helianthus annuus HOM05D026783 ORTHO05D029288 2.1e-08 63.5 88 65.9
FvH4_1g03610 Fragaria vesca HOM05D001781 ORTHO05D001711 2.7e-08 63.2 105 28.6
FAN19G3215 Fragaria x ananassa HOM05D001781 ORTHO05D001711 2.7e-08 63.2 105 28.6
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.7e-08 63.2 105 28.6
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.7e-08 63.2 105 28.6
DCAR_025485 Daucus carota HOM05D001781 ORTHO05D001711 3.5e-08 62.8 90 35.6
FAN26G1253 Fragaria x ananassa HOM05D001781 ORTHO05D001711 3.5e-08 62.8 105 28.6
Atru.chr6.2116 Acer truncatum HOM05D001781 ORTHO05D001711 4.6e-08 62.4 107 35.5
Lj4A461T9 Lonicera japonica HOM05D001781 ORTHO05D001711 4.6e-08 62.4 123 35.8
A05p10310 Brassica napus HOM05D001781 ORTHO05D001711 6.1e-08 62.0 97 37.1
Migut.B01746 Erythranthe guttata HOM05D001781 ORTHO05D001711 6.1e-08 62.0 92 38.0
BcaC02g11648 Brassica carinata HOM05D001781 ORTHO05D001711 7.9e-08 61.6 99 36.4
TWI63G0260 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 1.0e-07 61.2 103 35.0
Ciclev10008851m.g Citrus clementina HOM05D001781 ORTHO05D001711 1.3e-07 60.8 101 36.6
Hund09807 Selenicereus undatus HOM05D001781 ORTHO05D001711 1.3e-07 60.8 139 29.5
Carub.0004s1711 Capsella rubella HOM05D001781 ORTHO05D001711 1.8e-07 60.5 105 33.3
Peaxi162Scf00274g00839 Petunia axillaris HOM05D001781 ORTHO05D001711 3.0e-07 59.7 95 40.0
Psat0s4391g0080 Pisum sativum HOM05D001781 ORTHO05D001711 3.0e-07 59.7 111 31.5
TAR375G0425 Trochodendron aralioides HOM05D001781 ORTHO05D001711 3.0e-07 59.7 122 30.3
Aqoxy7G02095 Aquilegia oxysepala HOM05D001781 ORTHO05D001711 3.9e-07 59.3 101 32.7
Manes.11G052900 Manihot esculenta HOM05D001781 ORTHO05D001711 3.9e-07 59.3 93 34.4
SalBow5G2617 Salvia bowleyana HOM05D001781 ORTHO05D001711 3.9e-07 59.3 111 32.4
Sed0021791 Sechium edule HOM05D001781 ORTHO05D001711 3.9e-07 59.3 160 28.1
TWI34G1451 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 3.9e-07 59.3 102 33.3
Psat4g041600 Pisum sativum HOM05D001781 ORTHO05D001711 5.1e-07 58.9 108 30.6
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 6.7e-07 58.5 124 30.6
Peaxi162Scf00516g00651 Petunia axillaris HOM05D001781 ORTHO05D001711 6.7e-07 58.5 118 30.5
SalBow5G0702 Salvia bowleyana HOM05D001781 ORTHO05D001711 6.7e-07 58.5 111 32.4
Thecc.09G122900 Theobroma cacao HOM05D001781 ORTHO05D001711 6.7e-07 58.5 107 30.8
ClCG11G002860 Citrullus lanatus HOM05D001781 ORTHO05D001711 8.7e-07 58.2 135 28.1
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 8.7e-07 58.2 102 31.4
SGA_v2.0_scaffold5G02658 Striga asiatica HOM05D001781 ORTHO05D001711 8.7e-07 58.2 77 39.0
ECA240G1458 Erigeron canadensis HOM05D001781 ORTHO05D001711 1.1e-06 57.8 103 35.9
Psat4g121560 Pisum sativum HOM05D001781 ORTHO05D001711 1.1e-06 57.8 117 29.9
Aqoxy3G02311 Aquilegia oxysepala HOM05D001781 ORTHO05D001711 1.5e-06 57.4 122 31.1
COL.COLO4_05760 Corchorus olitorius HOM05D001781 ORTHO05D001711 1.5e-06 57.4 105 29.5
Lj4g0027268 Lotus japonicus HOM05D001781 ORTHO05D001711 1.5e-06 57.4 100 29.0
Medtr8g066730 Medicago truncatula HOM05D001781 ORTHO05D001711 1.5e-06 57.4 116 32.8
Nitab4.5_0000021g0790 Nicotiana tabacum HOM05D001781 ORTHO05D001711 1.5e-06 57.4 103 34.0
Prupe.5G033000 Prunus persica HOM05D001781 ORTHO05D001711 1.5e-06 57.4 156 26.9
Solyc06g072720.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 1.5e-06 57.4 118 29.7
Sopen06g029090 Solanum pennellii HOM05D001781 ORTHO05D001711 1.5e-06 57.4 118 29.7
PGSC0003DMG400026937 Solanum tuberosum HOM05D001781 ORTHO05D001711 1.5e-06 57.4 118 29.7
TAR636G2048 Trochodendron aralioides HOM05D001781 ORTHO05D001711 1.5e-06 57.4 100 31.0
AUR62002086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 1.9e-06 57.0 112 30.4
AUR62028204 Chenopodium quinoa HOM05D001781 ORTHO05D001711 1.9e-06 57.0 112 30.4
Peaxi162Scf00815g00352 Petunia axillaris HOM05D001781 ORTHO05D001711 1.9e-06 57.0 114 30.7
Sc13g0010950 Simmondsia chinensis HOM05D001781 ORTHO05D001711 1.9e-06 57.0 116 33.6
vmacro18965 Vaccinium macrocarpon HOM05D001781 ORTHO05D001711 1.9e-06 57.0 113 32.7
ATR0057G116 Amborella trichopoda HOM05D001781 ORTHO05D001711 3.3e-06 56.2 123 30.1
DCAR_017831 Daucus carota HOM05D001781 ORTHO05D001711 3.3e-06 56.2 110 30.9
Sed0025142 Sechium edule HOM05D001781 ORTHO05D001711 3.3e-06 56.2 160 25.6
ClCG09G011800 Citrullus lanatus HOM05D001781 ORTHO05D001711 4.3e-06 55.8 119 31.9
Nitab4.5_0000645g0100 Nicotiana tabacum HOM05D001781 ORTHO05D001711 4.3e-06 55.8 118 29.7
SalBow3G3071 Salvia bowleyana HOM05D001781 ORTHO05D001711 4.3e-06 55.8 110 31.8
Atru.chr7.1195 Acer truncatum HOM05D001781 ORTHO05D001711 5.7e-06 55.5 114 31.6
Cc08_g02980 Coffea canephora HOM05D001781 ORTHO05D001711 5.7e-06 55.5 158 25.3
MD06G1036400 Malus domestica HOM05D001781 ORTHO05D001711 5.7e-06 55.5 159 26.4
Prupe.7G239500 Prunus persica HOM05D001781 ORTHO05D001711 5.7e-06 55.5 102 31.4
SEGI_31390 Sequoiadendron giganteum HOM05D001781 ORTHO05D001711 5.7e-06 55.5 125 28.8
TPR.G3329 Trifolium pratense HOM05D001781 ORTHO05D001711 5.7e-06 55.5 116 31.0
vmacro20596 Vaccinium macrocarpon HOM05D001781 ORTHO05D001711 5.7e-06 55.5 120 30.8
VMungo0251G2200 Vigna mungo HOM05D001781 ORTHO05D001711 5.7e-06 55.5 117 30.8
EL10Ac5g12613 Beta vulgaris HOM05D001781 ORTHO05D001711 7.4e-06 55.1 114 31.6
CSS0022836 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 7.4e-06 55.1 98 32.7
CSS0038934 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 7.4e-06 55.1 98 32.7
Duzib187G1560 Durio zibethinus HOM05D001781 ORTHO05D001711 7.4e-06 55.1 107 29.9
Medtr4g113940 Medicago truncatula HOM05D001781 ORTHO05D001711 7.4e-06 55.1 87 33.3
Phvul.003G284200 Phaseolus vulgaris HOM05D001781 ORTHO05D001711 7.4e-06 55.1 118 30.5
Psat4g041560 Pisum sativum HOM05D001781 ORTHO05D001711 7.4e-06 55.1 106 31.1
Aa31LG2G13650 Aethionema arabicum HOM05D001781 ORTHO05D001711 9.7e-06 54.7 124 29.0
Hma1.2p1_0665F.1_g199160 Hydrangea macrophylla HOM05D001781 ORTHO05D001711 9.7e-06 54.7 97 35.1
MD02G1035700 Malus domestica HOM05D001781 ORTHO05D001711 9.7e-06 54.7 102 28.4
Nitab4.5_0002998g0030 Nicotiana tabacum HOM05D001781 ORTHO05D001711 9.7e-06 54.7 118 29.7
Psat0s4391g0160 Pisum sativum HOM05D001781 ORTHO05D001711 9.7e-06 54.7 123 30.1
Potri.003G061600 Populus trichocarpa HOM05D001781 ORTHO05D001711 9.7e-06 54.7 89 33.7


User provided reference genes

Program Settings