Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 5.1e-287 990.3 484 100.0
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 3.6e-277 957.6 477 97.1
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 5.5e-273 943.7 486 94.9
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 1.3e-269 932.6 483 94.0
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 3.7e-269 931.0 477 94.5
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 1.8e-268 928.7 484 91.5
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 5.3e-268 927.2 483 93.0
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 2.0e-267 925.2 483 92.3
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 5.8e-267 923.7 484 91.3
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 7.6e-267 923.3 484 91.5
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 7.6e-267 923.3 484 92.4
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 1.3e-266 922.5 484 92.1
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 1.7e-266 922.2 484 91.5
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 2.9e-266 921.4 484 91.3
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 2.9e-266 921.4 484 91.9
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 3.8e-266 921.0 484 91.9
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 3.8e-266 921.0 484 91.5
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 3.8e-266 921.0 484 91.3
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 3.8e-266 921.0 484 91.9
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 6.5e-266 920.2 484 91.1
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 8.4e-266 919.8 484 91.1
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 8.4e-266 919.8 484 91.1
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.1e-265 919.5 484 90.1
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.1e-265 919.5 484 91.1
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 1.9e-265 918.7 484 90.7
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.9e-265 918.7 484 91.3
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 3.2e-265 917.9 481 91.5
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.2e-265 917.5 484 90.9
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 9.3e-265 916.4 483 90.9
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 9.3e-265 916.4 484 90.5
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 1.6e-264 915.6 482 92.3
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.6e-264 915.6 484 90.7
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 1.6e-264 915.6 484 91.9
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 1.6e-264 915.6 483 91.1
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.1e-264 915.2 484 90.5
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 2.7e-264 914.8 484 91.3
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.7e-264 914.8 483 90.9
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 4.6e-264 914.1 483 90.9
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 4.6e-264 914.1 484 90.7
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 4.6e-264 914.1 484 90.9
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 6.0e-264 913.7 484 91.3
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 6.0e-264 913.7 484 91.5
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 6.0e-264 913.7 483 91.1
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.0e-263 912.9 483 90.5
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 1.0e-263 912.9 483 91.5
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.0e-263 912.9 484 90.7
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 1.3e-263 912.5 484 91.3
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.3e-263 912.5 484 91.3
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.3e-263 912.5 484 90.1
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 91.3
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 91.1
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 89.7
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.8e-263 912.1 484 90.5
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 2.3e-263 911.8 485 91.3
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 3.0e-263 911.4 484 91.1
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 5.1e-263 910.6 484 91.1
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 5.1e-263 910.6 484 91.3
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 8.7e-263 909.8 484 90.5
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.1e-262 909.4 484 91.1
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.1e-262 909.4 482 90.9
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 1.5e-262 909.1 484 91.1
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 1.9e-262 908.7 482 91.3
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 1.9e-262 908.7 484 91.1
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 1.9e-262 908.7 483 90.5
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 1.9e-262 908.7 483 90.5
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 2.5e-262 908.3 484 90.7
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 2.5e-262 908.3 484 90.3
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 3.3e-262 907.9 483 90.3
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 4.3e-262 907.5 483 90.1
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 5.7e-262 907.1 484 90.9
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 9.6e-262 906.4 484 91.1
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.3e-261 906.0 482 90.7
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.6e-261 905.6 484 90.1
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 2.1e-261 905.2 484 91.1
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 3.7e-261 904.4 486 90.7
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 3.7e-261 904.4 483 90.9
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 4.8e-261 904.0 483 90.1
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.8e-261 904.0 484 90.9
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 4.8e-261 904.0 483 90.1
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 8.2e-261 903.3 483 90.5
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 8.2e-261 903.3 485 90.7
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 8.2e-261 903.3 483 90.7
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.1e-260 902.9 484 89.7
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.4e-260 902.5 474 90.9
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 2.4e-260 901.7 483 90.7
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.4e-260 901.7 493 89.0
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 4.1e-260 901.0 483 89.2
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 5.3e-260 900.6 484 89.3
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.9e-260 900.2 484 88.6
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 9.0e-260 899.8 482 89.6
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 9.0e-260 899.8 489 89.4
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 1.5e-259 899.0 484 89.9
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 2.0e-259 898.7 478 90.2
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.4e-259 897.9 483 88.6
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 4.5e-259 897.5 483 89.4
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 5.9e-259 897.1 480 89.4
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 2.2e-258 895.2 484 89.5
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 2.9e-258 894.8 485 89.5
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.2e-257 891.0 483 89.9
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 7.2e-257 890.2 483 89.0
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 4.6e-256 887.5 483 88.6
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 6.1e-256 887.1 480 90.2
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.3e-255 885.9 461 92.6
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 3.0e-255 884.8 476 88.7
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 5.1e-255 884.0 480 90.2
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 8.7e-255 883.2 453 92.9
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.5e-251 872.5 457 91.5
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 4.6e-248 860.9 457 90.4
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.0e-247 859.8 484 86.4
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.3e-246 854.7 467 88.4
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 4.1e-244 847.8 480 83.3
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 2.6e-243 845.1 476 84.5
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.3e-242 842.8 481 85.7
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.7e-242 842.4 439 90.2
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.5e-241 838.6 457 86.4
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 3.7e-237 824.7 434 88.5
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 6.3e-237 823.9 407 94.6
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.6e-235 819.3 408 94.1
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 7.7e-235 817.0 407 94.3
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 5.0e-234 814.3 406 94.1
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.9e-233 812.4 405 94.1
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.4e-228 796.2 433 85.9
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 9.4e-225 783.5 483 79.9
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 4.8e-221 771.2 384 94.3
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 3.1e-220 768.5 427 83.4
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 1.0e-218 763.5 436 81.9
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 2.3e-218 762.3 421 82.9
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 2.2e-213 745.7 395 89.4
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 2.5e-209 732.3 481 76.7
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.0e-207 724.9 390 89.0
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 4.7e-192 674.9 366 89.6
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.9e-188 662.9 346 90.5
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.8e-183 644.4 483 69.6
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 7.6e-182 641.0 395 74.2
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.5e-177 625.9 315 93.3
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.9e-174 614.0 484 67.4
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-173 613.6 483 67.3
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.6e-171 605.1 483 66.9
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 9.0e-167 590.9 331 87.0
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.9e-146 522.3 279 88.2
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.7e-139 499.6 351 72.1
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 4.5e-126 455.7 275 76.0
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.2e-113 414.5 203 96.1
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.0e-98 364.8 180 93.3
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.8e-95 354.0 222 77.5
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.8e-93 346.3 172 94.2
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.0e-90 338.2 171 92.4
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 6.6e-85 318.9 483 41.8
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.1e-74 285.0 146 90.4
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.1e-68 265.0 146 87.0
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 2.6e-65 253.8 127 95.3
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 2.2e-64 250.8 127 90.6
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 6.4e-64 249.2 146 84.9
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 5.6e-60 236.1 144 81.9
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 7.8e-54 215.7 254 44.5
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 9.0e-50 202.2 100 92.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.2e-49 201.8 102 93.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.4e-49 200.3 124 81.5
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 5.6e-36 156.4 102 77.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 1.3e-35 155.2 77 96.1
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 1.3e-35 155.2 77 96.1
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.6e-35 154.8 105 69.5
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 1.3e-29 135.2 69 95.7
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.1e-29 133.3 71 90.1
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 2.5e-28 131.0 197 37.1
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-27 127.9 68 88.2
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-26 125.6 65 90.8
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-26 125.6 65 90.8
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.0e-26 122.5 66 87.9
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.0e-25 121.3 66 86.4
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.1e-22 109.8 83 66.3
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.3e-21 107.8 67 70.1
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 2.0e-20 104.8 67 71.6
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.7e-17 92.8 48 89.6
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 7.7e-17 92.8 168 36.9
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 6.1e-14 83.2 71 59.2
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 2.3e-13 81.3 72 59.7
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 5.1e-13 80.1 72 59.7
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 4.1e-10 70.5 61 59.0
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 3.8e-08 63.9 59 67.8
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 6.5e-08 63.2 59 55.9


User provided reference genes

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