Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 7.6e-135 483.8 238 100.0
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.0e-91 340.5 205 82.9
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.6e-84 315.5 234 69.7
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 2.1e-76 289.7 188 75.0
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.4e-74 282.3 182 72.5
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.1e-72 277.3 182 70.9
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 7.7e-71 271.2 190 69.5
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.3e-70 270.4 187 69.5
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 6.6e-70 268.1 206 64.6
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 4.2e-69 265.4 189 66.7
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 5.5e-69 265.0 190 68.4
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.6e-68 263.5 186 68.3
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.8e-67 260.0 197 64.0
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 6.8e-67 258.1 190 66.8
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.2e-66 257.3 174 67.8
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 5.7e-66 255.0 205 60.5
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 7.5e-66 254.6 179 68.2
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.3e-65 253.8 181 68.0
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.7e-65 253.4 204 63.2
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.7e-65 253.4 188 66.5
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 2.2e-65 253.1 186 66.7
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 2.8e-65 252.7 194 64.9
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 2.8e-65 252.7 177 70.1
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 4.9e-65 251.9 201 64.7
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.9e-65 251.9 195 61.5
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 8.3e-65 251.1 195 61.5
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.4e-64 249.6 178 70.8
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.1e-64 248.8 194 60.8
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 5.4e-64 248.4 205 60.5
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 9.2e-64 247.7 218 60.6
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 9.2e-64 247.7 175 65.1
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.2e-63 247.3 204 61.8
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.3e-62 243.8 190 64.7
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.7e-62 243.4 165 68.5
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 1.7e-62 243.4 193 63.7
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 2.9e-62 242.7 192 63.0
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 6.6e-62 241.5 155 72.9
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 8.6e-62 241.1 161 72.7
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.9e-61 240.0 177 64.4
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.9e-61 240.0 196 61.2
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.9e-61 240.0 175 66.3
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.5e-61 239.6 175 65.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 2.5e-61 239.6 174 66.7
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 3.3e-61 239.2 186 63.4
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 3.3e-61 239.2 183 65.0
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 4.3e-61 238.8 180 63.9
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 4.3e-61 238.8 173 64.2
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 5.6e-61 238.4 154 70.8
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 9.5e-61 237.7 173 63.6
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.2e-60 237.3 161 67.7
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.6e-60 236.9 161 68.9
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.1e-60 236.5 160 70.0
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 3.6e-60 235.7 208 57.7
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 4.7e-60 235.3 174 64.9
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 4.7e-60 235.3 177 63.8
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 4.7e-60 235.3 177 64.4
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 6.1e-60 235.0 177 63.8
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 8.0e-60 234.6 189 59.8
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 8.0e-60 234.6 174 66.1
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.8e-59 233.4 167 66.5
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 3.1e-59 232.6 169 62.7
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.0e-59 232.3 183 62.3
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 4.0e-59 232.3 181 63.0
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 4.0e-59 232.3 181 63.0
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 5.2e-59 231.9 181 63.0
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 6.8e-59 231.5 239 52.3
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 8.9e-59 231.1 168 65.5
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 1.2e-58 230.7 177 61.6
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 1.5e-58 230.3 183 61.7
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.5e-58 230.3 183 63.4
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 1.5e-58 230.3 177 62.1
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.5e-58 230.3 159 67.9
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 4.4e-58 228.8 191 58.1
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 4.4e-58 228.8 199 56.8
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.3e-57 227.3 156 68.6
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.7e-57 226.9 191 58.1
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 6.4e-57 224.9 174 63.2
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 6.4e-57 224.9 191 59.7
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 6.4e-57 224.9 174 63.2
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 8.3e-57 224.6 194 59.3
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 4.6e-55 218.8 174 60.9
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.9e-54 215.7 181 61.3
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 2.1e-52 209.9 149 69.8
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 3.6e-52 209.1 138 72.5
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.2e-50 204.1 156 59.6
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.4e-48 197.2 155 60.6
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.6e-47 193.7 156 57.7
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.6e-47 192.2 177 54.8
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 4.6e-47 192.2 190 54.2
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.3e-46 190.7 144 65.3
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 8.6e-46 188.0 170 55.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.1e-45 187.6 141 63.1
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 1.9e-45 186.8 198 50.0
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.9e-45 186.8 184 52.2
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.7e-44 182.2 157 54.8
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.6e-42 176.4 120 67.5
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.8e-42 175.3 159 56.6
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 7.1e-40 168.3 166 54.2
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.6e-37 158.7 154 55.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.4e-32 142.1 119 58.0
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.2e-28 131.0 195 42.1
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 3.1e-27 126.3 80 76.2
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 4.4e-26 122.5 83 63.9
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.9e-18 94.7 108 48.1
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 3.8e-17 92.8 151 35.8
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.1e-11 74.7 85 51.8
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.4e-10 69.7 43 69.8
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 2.5e-08 63.5 45 62.2
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 9.3e-08 61.6 41 63.4


User provided reference genes

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