Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3572 Erigeron canadensis HOM05D005976 ORTHO05D007149 0.0e+00 2359.3 1186 100.0
HanXRQChr09g0259071 Helianthus annuus HOM05D005976 ORTHO05D007149 0.0e+00 1855.1 1193 80.0
Lsat_1_v5_gn_8_114080 Lactuca sativa HOM05D005976 ORTHO05D007149 0.0e+00 1685.2 1173 74.1
Dinv40218 Davidia involucrata HOM05D005976 ORTHO05D007149 0.0e+00 1534.6 1199 65.9
Actinidia28755 Actinidia chinensis HOM05D005976 ORTHO05D007149 0.0e+00 1487.6 1179 64.3
Hma1.2p1_0085F.1_g044370 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 0.0e+00 1459.1 1177 64.5
Sopen02g026940 Solanum pennellii HOM05D005976 ORTHO05D007149 0.0e+00 1456.0 1195 62.4
PGSC0003DMG402013639 Solanum tuberosum HOM05D005976 ORTHO05D007149 0.0e+00 1453.3 1195 62.3
Solyc02g082280.3 Solanum lycopersicum HOM05D005976 ORTHO05D007149 0.0e+00 1449.9 1195 62.0
TAR381G0142 Trochodendron aralioides HOM05D005976 ORTHO05D007149 0.0e+00 1436.8 1197 61.7
Nitab4.5_0000855g0090 Nicotiana tabacum HOM05D005976 ORTHO05D007149 0.0e+00 1433.3 1183 62.3
Nitab4.5_0011596g0010 Nicotiana tabacum HOM05D005976 ORTHO05D007149 0.0e+00 1432.9 1183 62.6
DCAR_014120 Daucus carota HOM05D005976 ORTHO05D007149 0.0e+00 1427.2 1188 62.5
Rhsim08G0025900 Rhododendron simsii HOM05D005976 ORTHO05D007149 0.0e+00 1424.5 1193 62.5
CAN.G1428.10 Capsicum annuum HOM05D005976 ORTHO05D007149 0.0e+00 1423.7 1185 61.7
QL10p048872 Quercus lobata HOM05D005976 ORTHO05D007149 0.0e+00 1417.1 1188 61.0
Atru.chr3.58 Acer truncatum HOM05D005976 ORTHO05D007149 0.0e+00 1413.7 1206 60.6
vmacro18477 Vaccinium macrocarpon HOM05D005976 ORTHO05D007149 0.0e+00 1409.8 1212 61.2
Haze_03641 Corylus avellana HOM05D005976 ORTHO05D007149 0.0e+00 1393.6 1192 60.8
Peaxi162Scf00677g00223 Petunia axillaris HOM05D005976 ORTHO05D007149 0.0e+00 1385.9 1194 60.6
Cfa007111 Carpinus fangiana HOM05D005976 ORTHO05D007149 0.0e+00 1383.2 1193 60.4
MSTRG.18885 Avicennia marina HOM05D005976 ORTHO05D007149 0.0e+00 1382.1 1194 59.3
Potri.011G144700 Populus trichocarpa HOM05D005976 ORTHO05D007149 0.0e+00 1380.5 1193 60.1
Cc07_g12200 Coffea canephora HOM05D005976 ORTHO05D007149 0.0e+00 1377.1 1185 59.6
MD15G1228100 Malus domestica HOM05D005976 ORTHO05D007149 0.0e+00 1373.6 1202 59.0
PGR119G1871 Punica granatum HOM05D005976 ORTHO05D007149 0.0e+00 1369.8 1190 59.3
RcHm_v2.0_Chr2g0096791 Rosa chinensis HOM05D005976 ORTHO05D007149 0.0e+00 1368.6 1193 59.7
Sabra11G0129800 Salix brachista HOM05D005976 ORTHO05D007149 0.0e+00 1361.3 1197 59.6
Eucgr.I02203 Eucalyptus grandis HOM05D005976 ORTHO05D007149 0.0e+00 1359.0 1189 59.5
FvH4_1g10000 Fragaria vesca HOM05D005976 ORTHO05D007149 0.0e+00 1353.6 1192 58.7
PSO675G7053 Papaver somniferum HOM05D005976 ORTHO05D007149 0.0e+00 1352.0 1208 58.7
FAN19G1634 Fragaria x ananassa HOM05D005976 ORTHO05D007149 0.0e+00 1345.9 1199 58.4
FAN28G0094 Fragaria x ananassa HOM05D005976 ORTHO05D007149 0.0e+00 1342.4 1192 58.3
Aqoxy6G02993 Aquilegia oxysepala HOM05D005976 ORTHO05D007149 0.0e+00 1340.9 1199 58.3
TWI73G0718 Tripterygium wilfordii HOM05D005976 ORTHO05D007149 0.0e+00 1339.7 1195 58.3
Thecc.01G002100 Theobroma cacao HOM05D005976 ORTHO05D007149 0.0e+00 1337.0 1184 58.5
Gorai.001G200200 Gossypium raimondii HOM05D005976 ORTHO05D007149 0.0e+00 1335.9 1187 58.5
COL.COLO4_25046 Corchorus olitorius HOM05D005976 ORTHO05D007149 0.0e+00 1334.3 1183 57.9
Duzib147G1500 Durio zibethinus HOM05D005976 ORTHO05D007149 0.0e+00 1333.5 1190 58.3
Gohir.D07G179000 Gossypium hirsutum HOM05D005976 ORTHO05D007149 0.0e+00 1333.5 1187 58.4
Gohir.A07G172300 Gossypium hirsutum HOM05D005976 ORTHO05D007149 0.0e+00 1332.0 1187 58.2
Sc03g0004130 Simmondsia chinensis HOM05D005976 ORTHO05D007149 0.0e+00 1328.9 1185 59.0
Ciclev10026942m.g Citrus clementina HOM05D005976 ORTHO05D007149 0.0e+00 1328.5 1188 58.4
FAN26G2461 Fragaria x ananassa HOM05D005976 ORTHO05D007149 0.0e+00 1327.4 1195 57.7
FAN23G1414 Fragaria x ananassa HOM05D005976 ORTHO05D007149 0.0e+00 1327.0 1199 57.7
SalBow2G0432 Salvia bowleyana HOM05D005976 ORTHO05D007149 0.0e+00 1327.0 1230 57.0
Ca_22438_v3 Cicer arietinum L. HOM05D005976 ORTHO05D007149 0.0e+00 1325.5 1187 57.4
Glyma.16G112900 Glycine max HOM05D005976 ORTHO05D007149 0.0e+00 1323.1 1183 57.1
AUR62018030 Chenopodium quinoa HOM05D005976 ORTHO05D007149 0.0e+00 1322.0 1181 57.7
EL10Ac6g15029 Beta vulgaris HOM05D005976 ORTHO05D007149 0.0e+00 1321.6 1184 57.7
Glyma.09G196100 Glycine max HOM05D005976 ORTHO05D007149 0.0e+00 1312.0 1189 56.5
TPR.G27924 Trifolium pratense HOM05D005976 ORTHO05D007149 0.0e+00 1310.0 1205 56.2
Prupe.7G186800 Prunus persica HOM05D005976 ORTHO05D007149 0.0e+00 1309.7 1192 57.9
SGA_v2.0_scaffold6G03353 Striga asiatica HOM05D005976 ORTHO05D007149 0.0e+00 1309.3 1202 57.6
Medtr8g072710 Medicago truncatula HOM05D005976 ORTHO05D007149 0.0e+00 1307.0 1195 56.0
Psat4g106360 Pisum sativum HOM05D005976 ORTHO05D007149 0.0e+00 1303.9 1186 56.3
Lalb_Chr16g0391711 Lupinus albus HOM05D005976 ORTHO05D007149 0.0e+00 1303.5 1187 56.5
Manes.02G116600 Manihot esculenta HOM05D005976 ORTHO05D007149 0.0e+00 1299.3 1077 61.1
Lj4g0003913 Lotus japonicus HOM05D005976 ORTHO05D007149 0.0e+00 1295.0 1186 56.8
Hma1.2p1_0085F.1_g044380 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 0.0e+00 1293.5 1026 65.2
AUR62003719 Chenopodium quinoa HOM05D005976 ORTHO05D007149 0.0e+00 1289.2 1181 56.7
THA.LOC104819155 Tarenaya hassleriana HOM05D005976 ORTHO05D007149 0.0e+00 1286.9 1193 56.7
GSVIVG01026446001 Vitis vinifera HOM05D005976 ORTHO05D007149 0.0e+00 1286.2 1048 62.5
MELO3C007982.2 Cucumis melo HOM05D005976 ORTHO05D007149 0.0e+00 1283.9 1188 56.2
Phvul.003G271600 Phaseolus vulgaris HOM05D005976 ORTHO05D007149 0.0e+00 1283.5 1185 55.8
Nn6g31621 Nelumbo nucifera HOM05D005976 ORTHO05D007149 0.0e+00 1280.4 1077 60.4
Aa31LG1G14470 Aethionema arabicum HOM05D005976 ORTHO05D007149 0.0e+00 1278.5 1185 56.2
VMungo0251G2412 Vigna mungo HOM05D005976 ORTHO05D007149 0.0e+00 1278.5 1185 56.2
arahy.Tifrunner.gnm1.ann1.2S25M9 Arachis hypogaea HOM05D005976 ORTHO05D007149 0.0e+00 1276.2 1186 55.1
arahy.Tifrunner.gnm1.ann1.8BHC3E Arachis hypogaea HOM05D005976 ORTHO05D007149 0.0e+00 1270.0 1186 54.9
CsaV3_6G047940 Cucumis sativus L. HOM05D005976 ORTHO05D007149 0.0e+00 1268.8 1191 55.4
Hund19685 Selenicereus undatus HOM05D005976 ORTHO05D007149 0.0e+00 1268.1 1306 51.9
AT5G65950 Arabidopsis thaliana HOM05D005976 ORTHO05D007149 0.0e+00 1262.7 1193 55.7
CiPaw.06G032800 Carya illinoinensis HOM05D005976 ORTHO05D007149 0.0e+00 1261.9 1100 59.4
CARHR281820 Cardamine hirsuta HOM05D005976 ORTHO05D007149 0.0e+00 1253.8 1197 55.5
MBI04_g31209_MAGBIO Magnolia biondii HOM05D005976 ORTHO05D007149 0.0e+00 1249.6 1193 55.8
Migut.D02574 Erythranthe guttata HOM05D005976 ORTHO05D007149 0.0e+00 1241.1 1191 55.4
AL8G45690 Arabidopsis lyrata HOM05D005976 ORTHO05D007149 0.0e+00 1240.3 1194 55.2
Thhalv10003539m.g Eutrema salsugineum HOM05D005976 ORTHO05D007149 0.0e+00 1240.3 1192 55.5
CDE06G1894 Ceratophyllum demersum HOM05D005976 ORTHO05D007149 0.0e+00 1235.3 1189 55.4
Sp2g30740 Schrenkiella parvula HOM05D005976 ORTHO05D007149 0.0e+00 1234.6 1186 55.5
Carub.0008s2857 Capsella rubella HOM05D005976 ORTHO05D007149 0.0e+00 1228.8 1185 55.2
BolC3t21644H Brassica oleracea HOM05D005976 ORTHO05D007149 0.0e+00 1224.9 1186 54.8
unitig_746.g26634 Utricularia gibba HOM05D005976 ORTHO05D007149 0.0e+00 1224.5 1211 53.0
A08p00020 Brassica napus HOM05D005976 ORTHO05D007149 0.0e+00 1218.8 1189 54.6
ATR0605G043 Amborella trichopoda HOM05D005976 ORTHO05D007149 0.0e+00 1215.7 1186 54.5
Oeu021989.1 Olea europaea HOM05D005976 ORTHO05D007149 0.0e+00 1206.0 1198 55.2
ClCG01G020980 Citrullus lanatus HOM05D005976 ORTHO05D007149 0.0e+00 1204.9 1187 53.7
Ah.02g123200 Amaranthus hybridus HOM05D005976 ORTHO05D007149 0.0e+00 1175.6 1198 52.6
Zm00001eb252650 Zea mays HOM05D005976 ORTHO05D007149 0.0e+00 1175.6 1181 52.0
Sed0007865 Sechium edule HOM05D005976 ORTHO05D007149 0.0e+00 1161.0 1053 56.7
Sed0007938 Sechium edule HOM05D005976 ORTHO05D007149 0.0e+00 1131.3 1054 54.8
SEGI_34852 Sequoiadendron giganteum HOM05D005976 ORTHO05D007149 8.9e-301 1037.3 1223 46.9
BcaNung06215 Brassica carinata HOM05D005976 ORTHO05D007149 4.3e-279 965.3 1030 50.8
Cpa.g.sc365.8 Carica papaya HOM05D005976 ORTHO05D007149 2.0e-236 823.5 770 56.1
Mapoly0077s0054 Marchantia polymorpha HOM05D005976 ORTHO05D007149 3.9e-232 809.3 1230 39.2
Lj4A240G31 Lonicera japonica HOM05D005976 ORTHO05D007149 4.1e-229 799.3 698 60.7
Pp3c17_22570 Physcomitrium patens HOM05D005976 ORTHO05D007149 6.7e-224 781.9 1199 39.1
Migut.D02599 Erythranthe guttata HOM05D005976 ORTHO05D007149 2.0e-223 780.4 734 55.3
Mapoly0075s0041 Marchantia polymorpha HOM05D005976 ORTHO05D007149 1.7e-211 740.7 1213 38.3
BraA08t32059Z Brassica rapa HOM05D005976 ORTHO05D007149 2.1e-209 733.8 745 53.8
HPP92_022739 Vanilla planifolia HOM05D005976 ORTHO05D007149 2.2e-206 723.8 708 52.4
Potri.001G457201 Populus trichocarpa HOM05D005976 ORTHO05D007149 1.1e-202 711.4 831 48.7
Os02g0714500 Oryza sativa ssp. japonica HOM05D005976 ORTHO05D007149 4.3e-194 682.9 699 51.1
Lj4C240T7 Lonicera japonica HOM05D005976 ORTHO05D007149 1.9e-173 614.4 449 68.4
SHI19208 Sapria himalayana HOM05D005976 ORTHO05D007149 1.9e-165 587.8 786 42.2
FAN23G1168 Fragaria x ananassa HOM05D005976 ORTHO05D007149 1.5e-162 578.2 518 58.3
AagrBONN_evm.TU.Sc2ySwM_117.3206 Anthoceros agrestis HOM05D005976 ORTHO05D007149 5.1e-155 553.1 779 40.8
Hund03584 Selenicereus undatus HOM05D005976 ORTHO05D007149 9.3e-149 532.3 443 60.5
CBR_g24120 Chara braunii HOM05D005976 ORTHO05D007149 7.4e-138 496.1 1363 27.9
Zm00001eb188960 Zea mays HOM05D002434 ORTHO05D007149 5.7e-122 443.4 448 51.3
Cpa.g.sc6.347 Carica papaya HOM05D005976 ORTHO05D007149 1.6e-108 398.7 446 51.3
Zm00001eb055070 Zea mays HOM05D005976 ORTHO05D007149 2.7e-108 397.9 408 49.5
SMO144G0134 Selaginella moellendorffii HOM05D005976 ORTHO05D007149 9.1e-96 356.3 678 33.0
Cc04_g09170 Coffea canephora HOM05D005976 ORTHO05D007149 4.8e-89 334.0 364 51.6
Zm00001eb339980 Zea mays HOM05D005976 ORTHO05D007149 2.9e-65 255.0 289 46.4
Zm00001eb425900 Zea mays HOM05D005976 ORTHO05D007149 8.9e-51 206.8 224 50.0
arahy.Tifrunner.gnm1.ann1.SH4Y7X Arachis hypogaea HOM05D005976 ORTHO05D007149 1.2e-50 206.5 350 36.0
MCO16G661 Micromonas commoda HOM05D005976 ORTHO05D007149 2.3e-38 165.6 1278 21.4
Oeu041882.1 Olea europaea HOM05D005976 ORTHO05D007149 1.4e-32 146.4 130 53.1
Manes.07G108212 Manihot esculenta HOM05D005976 ORTHO05D007149 8.7e-30 137.1 172 50.6
Hma1.2p1_0085F.1_g044360 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 1.4e-19 103.2 102 53.9
Cre17.g729700 Chlamydomonas reinhardtii HOM05D005976 ORTHO05D007149 4.5e-18 98.2 360 25.3
Hund03583 Selenicereus undatus HOM05D005976 ORTHO05D007149 1.0e-17 97.1 100 55.0


User provided reference genes

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