Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 4.3e-214 747.7 366 100.0
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.3e-154 550.1 323 81.1
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 3.2e-148 528.9 324 76.5
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.8e-144 515.8 332 74.4
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 3.6e-144 515.4 338 73.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.1e-140 501.9 335 73.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 6.0e-139 498.0 341 69.8
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 3.0e-138 495.7 332 72.0
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.9e-138 495.4 332 71.1
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 3.3e-137 492.3 332 71.1
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.1e-136 489.6 334 69.8
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.8e-136 489.2 332 71.4
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 2.8e-136 489.2 363 66.4
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.6e-136 488.8 331 71.3
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 3.6e-136 488.8 334 70.4
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.1e-136 487.6 329 71.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.1e-136 487.6 331 71.0
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-135 487.3 363 66.1
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.4e-135 486.9 332 70.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.8e-135 486.5 328 71.3
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.0e-135 485.3 330 71.2
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.0e-135 485.3 363 65.6
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.2e-135 485.0 323 71.8
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 8.9e-135 484.2 326 69.9
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.6e-134 482.6 323 71.2
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 9.9e-134 480.7 335 67.8
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.7e-133 479.9 332 68.4
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-133 479.9 325 70.5
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.9e-133 479.2 332 68.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.1e-132 474.6 332 69.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 9.3e-132 474.2 331 69.8
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.6e-131 473.4 328 69.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.6e-131 473.4 329 68.7
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.1e-131 473.0 340 66.2
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 4.6e-131 471.9 332 68.4
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 6.0e-131 471.5 336 66.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 7.8e-131 471.1 330 68.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.0e-130 470.7 333 66.7
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.3e-130 470.3 315 70.8
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.7e-130 469.9 328 69.2
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.7e-130 469.9 332 67.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.3e-130 469.5 335 68.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 3.0e-130 469.2 333 67.0
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 3.0e-130 469.2 330 69.4
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.1e-130 468.4 332 68.7
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 6.6e-130 468.0 334 65.9
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 8.7e-130 467.6 329 68.4
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.5e-129 466.8 329 68.4
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.6e-129 464.9 313 69.6
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.3e-128 463.8 329 67.8
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 2.8e-128 462.6 332 68.1
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.1e-127 460.7 334 65.6
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.5e-126 456.8 326 67.5
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 2.0e-126 456.4 314 68.8
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 4.4e-126 455.3 331 66.8
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 9.9e-126 454.1 315 67.9
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.2e-125 453.0 340 64.7
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.2e-125 453.0 316 69.3
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.9e-125 452.6 334 64.4
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 8.4e-125 451.1 321 68.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.4e-124 449.5 306 69.3
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 4.2e-124 448.7 351 61.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 5.4e-124 448.4 335 64.8
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 9.3e-124 447.6 314 67.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.2e-123 447.2 334 66.8
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 5.1e-122 441.8 323 65.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.1e-121 440.7 323 65.6
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.1e-121 440.7 323 65.6
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.1e-121 440.7 323 65.6
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.5e-121 440.3 321 65.4
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.5e-121 440.3 321 65.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 7.4e-121 438.0 335 63.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.1e-120 436.4 314 65.3
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 6.2e-120 434.9 326 63.2
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 6.2e-120 434.9 312 65.4
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 8.1e-120 434.5 330 66.1
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.1e-119 434.1 316 65.2
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.0e-119 431.0 312 65.1
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 3.4e-118 429.1 327 61.8
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.4e-116 423.7 331 63.1
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.9e-116 423.3 318 63.8
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 4.2e-116 422.2 305 64.9
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.7e-115 419.5 334 61.4
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.3e-114 417.2 307 63.8
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.8e-114 416.8 315 65.1
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.9e-114 415.6 316 63.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.5e-113 412.9 328 61.0
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 5.3e-111 405.2 335 61.5
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.9e-109 398.7 320 63.1
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.6e-102 376.3 311 58.8
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 6.7e-98 361.7 309 56.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.3e-96 357.5 321 56.7
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.8e-90 337.0 286 59.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.3e-87 325.5 207 72.9
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 9.1e-87 324.7 202 79.2
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.2e-84 316.2 308 51.6
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.1e-83 313.5 307 50.8
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.1e-83 312.0 309 51.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.5e-78 295.8 203 69.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-74 284.6 229 59.8
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.3e-74 283.5 210 65.7
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.9e-70 268.9 161 78.3
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.2e-64 250.4 178 64.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.7e-61 240.7 163 66.9
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.8e-59 233.4 135 78.5
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.1e-55 219.5 159 67.3
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 7.8e-54 215.3 283 43.5
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.7e-49 199.1 197 54.8
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.4e-40 169.1 124 62.9
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.3e-40 168.7 131 65.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 3.5e-38 163.3 90 81.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.5e-36 157.1 145 55.9
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.8e-22 109.0 121 48.8
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-21 107.1 82 61.0
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.2e-19 101.7 249 30.5
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.1e-19 99.0 72 68.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.6e-17 94.0 332 28.6
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.1e-10 72.0 117 33.3
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 9.0e-10 68.9 131 32.8
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 2.7e-06 57.4 113 32.7
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 3.5e-06 57.0 199 23.6


User provided reference genes

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