Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 1.2e-124 449.9 238 100.0
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 3.0e-46 189.5 188 56.9
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 2.8e-44 183.0 189 56.6
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.0e-30 137.9 199 45.2
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 3.0e-30 136.3 151 50.3
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 2.0e-18 97.1 81 59.3
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 3.2e-16 89.7 118 43.2
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 7.1e-16 88.6 118 40.7
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 7.1e-16 88.6 104 43.3
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.6e-15 87.4 130 38.5
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.1e-15 87.0 145 37.2
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.1e-15 87.0 110 42.7
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 3.5e-15 86.3 149 35.6
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 6.0e-15 85.5 97 45.4
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.0e-14 84.7 188 35.6
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.8e-14 84.0 131 40.5
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.8e-14 84.0 131 40.5
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.8e-14 84.0 131 40.5
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.3e-14 83.6 128 38.3
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 3.0e-14 83.2 195 30.8
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.1e-14 82.4 131 39.7
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 6.7e-14 82.0 91 48.4
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.7e-14 82.0 104 43.3
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 6.7e-14 82.0 154 35.1
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 8.7e-14 81.6 114 41.2
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.7e-14 81.6 131 40.5
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.9e-13 80.5 138 31.2
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 1.9e-13 80.5 96 44.8
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 2.5e-13 80.1 82 48.8
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 2.5e-13 80.1 180 32.2
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.3e-13 79.3 118 40.7
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 5.6e-13 79.0 111 40.5
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 9.6e-13 78.2 110 40.9
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 2.8e-12 76.6 96 42.7
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 3.7e-12 76.3 145 34.5
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 4.8e-12 75.9 189 32.3
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 4.8e-12 75.9 193 31.6
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 4.8e-12 75.9 189 31.2
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.1e-11 74.7 149 33.6
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.4e-11 74.3 179 34.1
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.4e-11 74.3 94 43.6
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.4e-11 74.3 145 33.1
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 3.1e-11 73.2 156 34.6
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 3.1e-11 73.2 156 32.7
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 6.9e-11 72.0 195 28.2
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 2.0e-10 70.5 161 32.9
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 2.0e-10 70.5 166 31.3
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 3.4e-10 69.7 158 32.3
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 7.6e-10 68.6 103 38.8
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.7e-09 67.4 113 37.2
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 2.2e-09 67.0 190 30.5
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 2.2e-09 67.0 105 37.1
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 2.2e-09 67.0 192 32.3
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.9e-09 66.6 94 44.7
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.9e-09 66.6 175 30.3
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 3.8e-09 66.2 94 43.6
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 3.8e-09 66.2 163 32.5
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 4.9e-09 65.9 150 32.0
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.1e-08 64.7 94 41.5
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 1.1e-08 64.7 115 34.8
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 1.4e-08 64.3 168 29.8
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 4.2e-08 62.8 148 33.1
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 5.5e-08 62.4 162 32.7
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 5.5e-08 62.4 149 36.2
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 2.1e-07 60.5 138 29.7
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 3.5e-07 59.7 110 39.1
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 6.0e-07 58.9 96 34.4
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.0e-06 58.2 155 32.3
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 1.0e-06 58.2 173 30.1
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 1.8e-06 57.4 122 34.4
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 1.8e-06 57.4 99 39.4
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.0e-06 56.6 204 29.4
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 3.9e-06 56.2 159 28.9
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 3.9e-06 56.2 136 31.6
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 5.1e-06 55.8 92 39.1
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.7e-06 55.5 130 33.1
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 8.7e-06 55.1 166 31.3
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 8.7e-06 55.1 106 33.0


User provided reference genes

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