Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 4.7e-177 624.4 312 100.0
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 7.8e-156 553.9 311 89.1
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 6.9e-152 540.8 317 86.4
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 1.9e-138 496.1 313 79.9
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 2.8e-137 492.3 311 78.8
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 1.8e-136 489.6 310 77.4
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 3.1e-136 488.8 311 79.1
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 5.3e-136 488.0 310 77.7
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 6.9e-136 487.6 313 78.0
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 2.6e-135 485.7 310 77.4
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 2.6e-135 485.7 311 77.5
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 1.7e-134 483.0 315 76.5
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 2.9e-134 482.3 315 76.2
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 2.9e-134 482.3 313 78.0
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 3.8e-134 481.9 313 77.0
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 4.9e-134 481.5 310 77.7
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 4.9e-134 481.5 310 77.7
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 6.5e-134 481.1 311 77.8
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 8.4e-134 480.7 312 77.6
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 8.4e-134 480.7 313 78.3
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 1.1e-133 480.3 311 78.5
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 1.1e-133 480.3 312 77.6
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 3.2e-133 478.8 313 78.0
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 4.2e-133 478.4 313 75.7
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 5.5e-133 478.0 313 77.0
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 7.1e-133 477.6 314 76.4
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 7.1e-133 477.6 310 76.5
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 9.3e-133 477.2 313 78.0
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.6e-132 476.5 311 76.8
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.6e-132 476.5 311 76.8
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 1.6e-132 476.5 313 77.0
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 2.1e-132 476.1 311 77.2
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 4.6e-132 474.9 312 76.9
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 4.6e-132 474.9 311 76.2
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 1.3e-131 473.4 329 73.3
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 1.8e-131 473.0 319 75.2
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 1.8e-131 473.0 311 74.9
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 3.9e-131 471.9 319 74.9
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 3.9e-131 471.9 321 74.1
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 3.9e-131 471.9 313 77.3
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 6.7e-131 471.1 313 76.4
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 8.7e-131 470.7 313 76.0
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 1.5e-130 469.9 309 75.4
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 1.9e-130 469.5 314 75.2
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 1.9e-130 469.5 310 76.5
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 2.5e-130 469.2 313 76.7
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 3.3e-130 468.8 314 75.8
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 4.3e-130 468.4 311 74.3
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 5.7e-130 468.0 317 75.1
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 1.6e-129 466.5 311 74.0
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.6e-129 466.5 311 75.9
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 2.1e-129 466.1 310 76.1
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 2.1e-129 466.1 310 77.4
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.8e-129 465.7 311 75.9
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 3.7e-129 465.3 317 73.8
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 6.3e-129 464.5 320 74.1
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 6.3e-129 464.5 319 73.0
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 1.1e-128 463.8 311 74.6
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 1.8e-128 463.0 319 72.7
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 1.8e-128 463.0 312 75.0
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 1.8e-128 463.0 313 74.8
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 1.8e-128 463.0 311 74.3
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 2.4e-128 462.6 309 75.7
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 3.1e-128 462.2 310 72.6
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 5.3e-128 461.5 319 72.7
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 5.3e-128 461.5 311 74.3
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 6.9e-128 461.1 331 71.0
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 6.9e-128 461.1 311 74.9
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 9.0e-128 460.7 315 73.7
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 1.2e-127 460.3 326 71.2
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 1.2e-127 460.3 319 73.7
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.2e-127 460.3 307 74.6
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.5e-127 459.9 311 74.9
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 1.5e-127 459.9 310 72.3
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 2.0e-127 459.5 311 74.9
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 2.0e-127 459.5 311 74.0
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 2.0e-127 459.5 313 72.5
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 2.0e-127 459.5 312 74.7
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 2.0e-127 459.5 311 74.6
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 2.6e-127 459.1 311 74.6
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 5.9e-127 458.0 312 74.4
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 1.3e-126 456.8 315 73.7
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 1.3e-126 456.8 310 73.5
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 2.9e-126 455.7 311 75.2
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 2.9e-126 455.7 311 74.6
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 3.8e-126 455.3 315 73.3
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 1.9e-125 453.0 311 74.3
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 3.2e-125 452.2 312 74.0
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 4.2e-125 451.8 310 74.2
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 9.3e-125 450.7 308 75.0
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 9.3e-125 450.7 309 75.4
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 3.6e-124 448.7 318 71.4
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.0e-123 447.2 300 75.0
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 1.8e-123 446.4 281 78.6
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 3.9e-123 445.3 312 73.1
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 1.1e-122 443.7 314 72.6
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 3.3e-122 442.2 264 81.4
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 4.8e-121 438.3 308 71.8
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 1.4e-120 436.8 336 69.3
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 7.7e-119 431.0 312 70.2
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.9e-118 429.1 265 81.1
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 5.0e-118 428.3 281 75.1
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 1.6e-116 423.3 311 69.5
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.6e-116 421.8 270 79.3
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 1.4e-112 410.2 325 66.2
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 3.4e-111 405.6 312 66.7
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 5.0e-110 401.7 322 64.6
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 7.2e-109 397.9 322 63.4
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 1.8e-107 393.3 262 73.3
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.4e-104 383.6 307 64.8
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 1.4e-104 383.6 223 84.8
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 5.9e-103 378.3 309 64.7
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 4.2e-101 372.1 332 60.5
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.7e-100 369.4 311 64.3
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 9.7e-98 360.9 309 62.1
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.7e-97 360.1 304 62.8
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 6.3e-97 358.2 334 56.9
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 5.3e-96 355.1 311 62.7
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 1.2e-95 354.0 229 72.1
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 2.7e-95 352.8 309 59.5
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 2.7e-95 352.8 231 73.2
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 7.2e-85 318.2 248 65.3
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 9.5e-85 317.8 321 55.8
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 2.1e-84 316.6 204 76.5
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 2.3e-83 313.2 226 69.9
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 7.3e-77 291.6 263 59.3
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 1.0e-75 287.7 165 84.2
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 1.5e-74 283.9 208 69.2
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 7.5e-74 281.6 316 50.6
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 7.8e-71 271.6 159 83.6
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 8.3e-65 251.5 361 42.7
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 2.7e-63 246.5 150 78.0
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 3.9e-62 242.7 170 72.9
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 2.0e-58 230.3 171 67.3
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.4e-56 223.4 134 79.9
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 5.4e-56 222.2 166 68.1
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 2.3e-54 216.9 289 43.9
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 8.9e-51 204.9 131 78.6
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.4e-48 196.8 112 83.9
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.5e-47 193.0 120 76.7
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.1e-46 189.1 124 73.4
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 5.1e-46 189.1 116 77.6
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 6.6e-46 188.7 124 73.4
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 6.6e-46 188.7 124 73.4
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 2.5e-45 186.8 240 47.1
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.5e-45 186.8 124 72.6
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.5e-45 186.8 120 75.0
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.6e-45 185.7 120 75.0
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.6e-44 183.0 118 74.6
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.2e-44 182.2 120 72.5
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.1e-39 167.2 157 58.0
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.7e-38 164.1 296 39.5
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.3e-38 163.7 93 82.8
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 3.3e-37 159.8 101 75.2
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 5.6e-37 159.1 101 75.2
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.1e-29 134.8 84 76.2
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 8.1e-28 128.6 93 68.8
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.4e-27 127.9 136 53.7
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 8.4e-25 118.6 95 62.1
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 8.4e-25 118.6 95 62.1
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-21 107.5 64 81.2
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.3e-21 106.3 64 81.2
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.4e-19 100.5 74 70.3
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 3.8e-17 93.2 107 51.4
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 1.9e-16 90.9 62 71.0
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 1.2e-15 88.2 50 80.0
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 1.2e-15 88.2 50 80.0
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.6e-15 87.8 94 55.3
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.1e-15 87.4 94 55.3
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.5e-15 86.7 50 78.0
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 3.5e-15 86.7 50 78.0
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.0e-15 85.9 94 55.3
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 7.9e-15 85.5 47 78.7
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 7.9e-15 85.5 230 29.1
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 3.0e-14 83.6 75 60.0
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 9.7e-13 78.6 79 55.7
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 1.9e-08 64.3 122 39.3
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 4.2e-08 63.2 153 33.3


User provided reference genes

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