Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.8e-152 542.7 288 100.0
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 7.0e-112 407.9 285 79.6
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 5.8e-98 361.7 289 69.6
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 5.4e-88 328.6 260 68.8
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.2e-87 327.4 290 63.8
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.6e-87 327.0 285 64.2
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 6.0e-87 325.1 290 61.7
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 2.3e-86 323.2 283 61.5
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 5.1e-86 322.0 283 62.5
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 6.6e-86 321.6 281 64.4
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 8.6e-86 321.2 276 63.0
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.9e-85 320.1 277 64.6
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 9.5e-85 317.8 291 61.5
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.6e-84 317.0 267 67.0
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 4.7e-84 315.5 282 61.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 3.1e-83 312.8 270 63.7
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 4.0e-83 312.4 288 60.4
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 5.2e-83 312.0 274 62.8
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 6.8e-83 311.6 253 67.2
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.0e-82 310.1 262 64.5
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 3.4e-82 309.3 279 62.4
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 5.8e-82 308.5 280 62.1
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 7.6e-82 308.1 288 61.1
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 7.6e-82 308.1 250 66.4
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 2.9e-81 306.2 282 60.3
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 2.9e-81 306.2 289 61.6
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 2.9e-81 306.2 260 64.6
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 3.8e-81 305.8 252 65.5
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 3.8e-81 305.8 252 65.5
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 3.8e-81 305.8 300 58.3
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 4.9e-81 305.4 276 62.0
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 6.4e-81 305.1 252 65.5
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 6.4e-81 305.1 254 63.4
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 6.4e-81 305.1 266 62.0
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 6.4e-81 305.1 278 61.9
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 8.4e-81 304.7 252 65.1
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 1.1e-80 304.3 287 59.6
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 1.4e-80 303.9 266 62.4
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.4e-80 303.9 276 60.9
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.4e-80 303.9 288 58.7
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.4e-80 303.9 250 64.4
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 2.4e-80 303.1 279 59.5
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 4.1e-80 302.4 283 60.4
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 5.4e-80 302.0 250 64.4
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 7.1e-80 301.6 279 60.6
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 9.2e-80 301.2 279 58.8
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 9.2e-80 301.2 287 57.8
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.2e-79 300.8 285 61.1
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 1.2e-79 300.8 255 63.5
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.6e-79 300.4 288 57.6
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 1.6e-79 300.4 272 62.5
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 4.6e-79 298.9 293 58.0
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 6.0e-79 298.5 253 64.0
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 6.0e-79 298.5 254 63.0
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.7e-78 297.0 291 56.4
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.7e-78 297.0 285 58.2
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 2.3e-78 296.6 289 59.5
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 8.7e-78 294.7 224 68.3
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 2.5e-77 293.1 254 63.0
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.3e-77 292.7 254 64.6
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 9.6e-77 291.2 251 61.8
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 9.6e-77 291.2 256 62.5
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.8e-76 289.7 258 61.6
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 3.6e-76 289.3 302 56.0
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 6.2e-76 288.5 256 62.1
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 2.4e-75 286.6 250 62.0
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 9.0e-75 284.6 208 72.1
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.5e-74 283.9 315 53.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 2.6e-74 283.1 281 56.6
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 7.6e-74 281.6 256 62.5
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 7.6e-74 281.6 274 59.5
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 7.6e-74 281.6 303 54.5
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 3.5e-71 272.7 243 59.7
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 8.7e-70 268.1 274 55.1
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.9e-69 266.9 296 51.7
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.3e-69 265.8 285 53.7
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 7.3e-69 265.0 250 60.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 7.3e-69 265.0 296 52.4
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 1.6e-68 263.8 220 65.0
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.8e-68 262.3 277 54.5
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.8e-67 260.4 288 54.5
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 2.4e-67 260.0 254 57.9
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 3.1e-67 259.6 298 52.7
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 3.1e-67 259.6 285 54.7
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.3e-65 254.2 253 55.3
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 2.9e-65 253.1 275 55.3
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 3.8e-65 252.7 222 60.4
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 5.4e-64 248.8 253 53.8
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 9.3e-64 248.1 228 64.0
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.3e-62 244.2 299 50.2
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 2.8e-60 236.5 274 53.6
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 2.2e-57 226.9 188 65.4
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 5.5e-56 222.2 252 54.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.8e-51 207.2 218 54.6
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.4e-51 206.8 200 60.5
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 4.2e-48 196.1 148 67.6
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 7.9e-47 191.8 255 42.7
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 8.5e-41 171.8 215 44.7
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 2.3e-38 163.7 131 62.6
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 3.0e-38 163.3 257 39.3
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 3.3e-37 159.8 107 77.6
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 3.7e-36 156.4 237 38.4
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 4.8e-36 156.0 270 40.0
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 1.5e-34 151.0 120 64.2
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.0e-33 148.3 119 60.5
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.2e-33 147.1 157 52.2
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 7.2e-32 142.1 116 62.1
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 3.0e-30 136.7 116 61.2
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.3e-29 133.3 167 48.5
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.5e-26 124.4 208 42.3
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 7.7e-26 122.1 132 54.5
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 2.9e-25 120.2 132 56.8
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.4e-24 117.9 116 50.9
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.3e-20 102.4 212 37.7
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.6e-10 71.2 91 49.5
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 7.7e-10 68.9 131 37.4
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 1.3e-09 68.2 60 63.3
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.2e-09 67.4 60 61.7
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 7.2e-08 62.4 50 52.0


User provided reference genes

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